Literature DB >> 35308966

Characterizing Brain Network Dynamics using Persistent Homology in Patients with Refractory Epilepsy.

Jianzhe Zhang1, Roland Bauman2, Nassim Shafiabadi1,3, Nick Gurski2, Guadalupe Fernandez-BacaVaca3, Satya S Sahoo1,3.   

Abstract

Epilepsy is a common serious neurological disorder that affects more than 65 million persons worldwide and it is characterized by repeated seizures that lead to higher mortality and disabilities with corresponding negative impact on the quality of life of patients. Network science methods that represent brain regions as nodes and the interactions between brain regions as edges have been extensively used in characterizing network changes in neurological disorders. However, the limited ability of graph network models to represent high dimensional brain interactions are being increasingly realized in the computational neuroscience community. In particular, recent advances in algebraic topology research have led to the development of a large number of applications in brain network studies using topological structures. In this paper, we build on a fundamental construct of cliques, which are all-to-all connected nodes with a k-clique in a graph G (V, E), where V is set of nodes and E is set of edges, consisting of k-nodes to characterize the brain network dynamics in epilepsy patients using topological structures. Cliques represent brain regions that are coupled for similar functions or engage in information exchange; therefore, cliques are suitable structures to characterize the dynamics of brain dynamics in neurological disorders. We propose to detect and use clique structures during well-defined clinical events, such as epileptic seizures, to combine non-linear correlation measures in a matrix with identification of geometric structures underlying brain connectivity networks to identify discriminating features that can be used for clinical decision making in epilepsy neurological disorder. ©2021 AMIA - All rights reserved.

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Year:  2022        PMID: 35308966      PMCID: PMC8861704     

Source DB:  PubMed          Journal:  AMIA Annu Symp Proc        ISSN: 1559-4076


  27 in total

Review 1.  Presurgical evaluation of epilepsy.

Authors:  F Rosenow; H Lüders
Journal:  Brain       Date:  2001-09       Impact factor: 13.501

2.  Extratemporal functional connectivity impairments at rest are related to memory performance in mesial temporal epilepsy.

Authors:  Gaëlle Doucet; Karol Osipowicz; Ashwini Sharan; Michael R Sperling; Joseph I Tracy
Journal:  Hum Brain Mapp       Date:  2012-04-16       Impact factor: 5.038

3.  Loss of network efficiency associated with cognitive decline in chronic epilepsy.

Authors:  M C G Vlooswijk; M J Vaessen; J F A Jansen; M C F T M de Krom; H J M Majoie; P A M Hofman; A P Aldenkamp; W H Backes
Journal:  Neurology       Date:  2011-08-10       Impact factor: 9.910

4.  Enhanced EEG functional connectivity in mesial temporal lobe epilepsy.

Authors:  Gaelle Bettus; Fabrice Wendling; Maxime Guye; Luc Valton; Jean Régis; Patrick Chauvel; Fabrice Bartolomei
Journal:  Epilepsy Res       Date:  2008-06-10       Impact factor: 3.045

5.  White matter network abnormalities are associated with cognitive decline in chronic epilepsy.

Authors:  Maarten J Vaessen; Jacobus F A Jansen; Marielle C G Vlooswijk; Paul A M Hofman; H J Marian Majoie; Albert P Aldenkamp; Walter H Backes
Journal:  Cereb Cortex       Date:  2011-10-29       Impact factor: 5.357

6.  Neural networks involving the medial temporal structures in temporal lobe epilepsy.

Authors:  F Bartolomei; F Wendling; J J Bellanger; J Régis; P Chauvel
Journal:  Clin Neurophysiol       Date:  2001-09       Impact factor: 3.708

7.  Interictal network properties in mesial temporal lobe epilepsy: a graph theoretical study from intracerebral recordings.

Authors:  F Bartolomei; G Bettus; C J Stam; M Guye
Journal:  Clin Neurophysiol       Date:  2013-06-28       Impact factor: 3.708

8.  Characterization of functional and structural integrity in experimental focal epilepsy: reduced network efficiency coincides with white matter changes.

Authors:  Willem M Otte; Rick M Dijkhuizen; Maurits P A van Meer; Wilhelmina S van der Hel; Suzanne A M W Verlinde; Onno van Nieuwenhuizen; Max A Viergever; Cornelis J Stam; Kees P J Braun
Journal:  PLoS One       Date:  2012-07-12       Impact factor: 3.240

9.  Using network analysis to localize the epileptogenic zone from invasive EEG recordings in intractable focal epilepsy.

Authors:  Adam Li; Bhaskar Chennuri; Sandya Subramanian; Robert Yaffe; Steve Gliske; William Stacey; Robert Norton; Austin Jordan; Kareem A Zaghloul; Sara K Inati; Shubhi Agrawal; Jennifer J Haagensen; Jennifer Hopp; Chalita Atallah; Emily Johnson; Nathan Crone; William S Anderson; Zach Fitzgerald; Juan Bulacio; John T Gale; Sridevi V Sarma; Jorge Gonzalez-Martinez
Journal:  Netw Neurosci       Date:  2018-06-01

Review 10.  Two's company, three (or more) is a simplex : Algebraic-topological tools for understanding higher-order structure in neural data.

Authors:  Chad Giusti; Robert Ghrist; Danielle S Bassett
Journal:  J Comput Neurosci       Date:  2016-06-11       Impact factor: 1.621

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