Literature DB >> 35306404

Enhancing cosinor analysis of circadian phase markers using the gamma distribution.

Margaret M Doyle1, Terrence E Murphy2, Brienne Miner2, Margaret A Pisani3, Elizabeth R Lusczek4, Melissa P Knauert3.   

Abstract

The cosinor model, in which a cosine curve is fitted to periodic data within a regression model, is a frequently used method for describing patterns of cyclical activity such as circadian rhythms. For circadian variables of interest (eg, melatonin and heart rate) that do not take on negative values, the assumption of normally distributed residuals required by the general linear model, which is most commonly used for cosinor analysis, may not be appropriate. Alternatively, a generalized linear model with the gamma distribution (GZLM-gamma) is specifically defined to accommodate non-negative outcomes. Herein, we demonstrate the improved fit and gains of efficiency in detection of circadian rhythm afforded by using the GZLM-gamma in cosinor models of heart rate, actigraphic activity, and urinary 6-sulfatoxymelatonin. Notably, this improved detection of circadian rhythm allows retention of additional patients for downstream analyses, further improving study power.
Copyright © 2022. Published by Elsevier B.V.

Entities:  

Keywords:  Actigraphy; Circadian; Cosinor; Diurnal variation; Gamma distribution; Normal distribution

Mesh:

Substances:

Year:  2022        PMID: 35306404      PMCID: PMC9356385          DOI: 10.1016/j.sleep.2022.01.015

Source DB:  PubMed          Journal:  Sleep Med        ISSN: 1389-9457            Impact factor:   4.842


  6 in total

1.  Randomised controlled trial of the efficacy of a blue-enriched light intervention to improve alertness and performance in night shift workers.

Authors:  Tracey L Sletten; Suzanne Ftouni; Christian L Nicholas; Michelle Magee; Ronald R Grunstein; Sally Ferguson; David J Kennaway; Darren O'Brien; Steven W Lockley; Shantha M W Rajaratnam
Journal:  Occup Environ Med       Date:  2017-06-19       Impact factor: 4.402

Review 2.  The role of actigraphy in the study of sleep and circadian rhythms.

Authors:  Sonia Ancoli-Israel; Roger Cole; Cathy Alessi; Mark Chambers; William Moorcroft; Charles P Pollak
Journal:  Sleep       Date:  2003-05-01       Impact factor: 5.849

3.  A SAS macro for modelling periodic data using cosinor analysis.

Authors:  Margaret M Doyle; Terrence E Murphy; Margaret A Pisani; Henry K Yaggi; Sangchoon Jeon; Nancy S Redeker; Melissa P Knauert
Journal:  Comput Methods Programs Biomed       Date:  2021-07-23       Impact factor: 7.027

4.  Diurnal rhythms in the human urine metabolome during sleep and total sleep deprivation.

Authors:  Guro F Giskeødegård; Sarah K Davies; Victoria L Revell; Hector Keun; Debra J Skene
Journal:  Sci Rep       Date:  2015-10-09       Impact factor: 4.379

5.  Variability in phase and amplitude of diurnal rhythms is related to variation of mood in bipolar and borderline personality disorder.

Authors:  O Carr; K E A Saunders; A Tsanas; A C Bilderbeck; N Palmius; J R Geddes; R Foster; G M Goodwin; M De Vos
Journal:  Sci Rep       Date:  2018-01-26       Impact factor: 4.379

  6 in total

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