Literature DB >> 35294558

Understanding and Engineering Glycine Cleavage System and Related Metabolic Pathways for C1-Based Biosynthesis.

Jie Ren1,2, Wei Wang3, Jinglei Nie1,3, Wenqiao Yuan4, An-Ping Zeng5,6.   

Abstract

The glycine cleavage system (GCS) is a fundamental component of life, widely existing in microbes, plants, animals, and humans. A better understanding of the functionality and working mechanisms, and the engineering of the GCS have both scientific and practical impacts, which may lead to new knowledge and findings in life sciences, improved biomass production and human/animal health, efficient biosynthesis of chemicals, effective carbon fixation and global climate change mitigation. In this chapter, the GCS is first discussed in the context of the reductive glycine pathway (rGlyP), a recently proposed and appealing assimilation pathway of CO2 and formate, and its implementation and optimization in microorganisms for formatotrophic growth. Then, the present knowledge about the components, reactions, and working mechanisms of the GCS and related enzymes is reviewed. Particular emphasis is also placed on the conformational and structural features of the GCS proteins, especially the different forms of lipoylated H protein and its lipoylation by lipoate protein ligase (LplA). Subsequently, existing analytic methods for the components and reactions of the GCS and recent advances in quantitatively understanding and purposefully engineering the GCS are presented. Finally, perspectives of current state of the art in the GCS research are given and future research needs are highlighted.
© 2022. The Author(s), under exclusive license to Springer Nature Switzerland AG.

Entities:  

Keywords:  Aminomethyl-transferase; C1 assimilation; Dihydrolipoyl dehydrogenase; Glycine cleavage system; Glycine decarboxylase; H protein; L protein; P protein; Reductive glycine pathway; T protein

Mesh:

Substances:

Year:  2022        PMID: 35294558     DOI: 10.1007/10_2021_186

Source DB:  PubMed          Journal:  Adv Biochem Eng Biotechnol        ISSN: 0724-6145            Impact factor:   2.635


  77 in total

Review 1.  Photorespiration: players, partners and origin.

Authors:  Hermann Bauwe; Martin Hagemann; Alisdair R Fernie
Journal:  Trends Plant Sci       Date:  2010-04-18       Impact factor: 18.313

2.  Metagenomics-guided analysis of microbial chemolithoautotrophic phosphite oxidation yields evidence of a seventh natural CO2 fixation pathway.

Authors:  Israel A Figueroa; Tyler P Barnum; Pranav Y Somasekhar; Charlotte I Carlström; Anna L Engelbrektson; John D Coates
Journal:  Proc Natl Acad Sci U S A       Date:  2017-11-28       Impact factor: 11.205

3.  Design and analysis of metabolic pathways supporting formatotrophic growth for electricity-dependent cultivation of microbes.

Authors:  Arren Bar-Even; Elad Noor; Avi Flamholz; Ron Milo
Journal:  Biochim Biophys Acta       Date:  2012-10-30

Review 4.  The formate bio-economy.

Authors:  Oren Yishai; Steffen N Lindner; Jorge Gonzalez de la Cruz; Hezi Tenenboim; Arren Bar-Even
Journal:  Curr Opin Chem Biol       Date:  2016-07-25       Impact factor: 8.822

Review 5.  The ins and outs of serine and glycine metabolism in cancer.

Authors:  Shauni L Geeraerts; Elien Heylen; Kim De Keersmaecker; Kim R Kampen
Journal:  Nat Metab       Date:  2021-01-28

6.  Reductive Glycine Pathway: A Versatile Route for One-Carbon Biotech.

Authors:  Nico J Claassens
Journal:  Trends Biotechnol       Date:  2021-02-23       Impact factor: 19.536

Review 7.  Synthetic biology for CO2 fixation.

Authors:  Fuyu Gong; Zhen Cai; Yin Li
Journal:  Sci China Life Sci       Date:  2016-10-26       Impact factor: 6.038

Review 8.  Glycine cleavage system: reaction mechanism, physiological significance, and hyperglycinemia.

Authors:  Goro Kikuchi; Yutaro Motokawa; Tadashi Yoshida; Koichi Hiraga
Journal:  Proc Jpn Acad Ser B Phys Biol Sci       Date:  2008       Impact factor: 3.493

9.  Overexpressing the H-protein of the glycine cleavage system increases biomass yield in glasshouse and field-grown transgenic tobacco plants.

Authors:  Patricia E López-Calcagno; Stuart Fisk; Kenny L Brown; Simon E Bull; Paul F South; Christine A Raines
Journal:  Plant Biotechnol J       Date:  2018-07-22       Impact factor: 9.803

Review 10.  The complexity of the serine glycine one-carbon pathway in cancer.

Authors:  Miguel Reina-Campos; Maria T Diaz-Meco; Jorge Moscat
Journal:  J Cell Biol       Date:  2020-01-06       Impact factor: 10.539

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