Beeyoung Gun Lee1, Hyun Tak Shin2, Jae-Seoun Hur3. 1. Baekdudaegan National Arboretum, Bonghwa, South Korea. 2. Korea National Arboretum, Pocheon, South Korea. 3. Korean Lichen Research Institute, Sunchon National University, Suncheon, South Korea.
Abstract
Aspicilia humida Lee is described as a new lichen-forming fungus from a wetland forest, South Korea. The new species is distinguishable from Aspicilia aquatica (Fr.) Körb., the most similar species, by the absence of prothallus, black disk without green color in water, olive-brown epihymenium, shorter hymenium, hymenium I + yellowish blue-green, wider paraphysial tips without a vivid pigment, smaller asci, smaller ascospores, and the presence of stictic acid. Molecular analyses employing internal transcribed spacer (ITS) and mitochondrial small subunit (mtSSU) sequences strongly support A. humida as a distinct species in the A. cinerea group. A surrogate key is provided to assist in the identification of all 28 aspicilioid species of Korea.
Aspicilia humida Lee is described as a new lichen-forming fungus from a wetland forest, South Korea. The new species is distinguishable from Aspicilia aquatica (Fr.) Körb., the most similar species, by the absence of prothallus, black disk without green color in water, olive-brown epihymenium, shorter hymenium, hymenium I + yellowish blue-green, wider paraphysial tips without a vivid pigment, smaller asci, smaller ascospores, and the presence of stictic acid. Molecular analyses employing internal transcribed spacer (ITS) and mitochondrial small subunit (mtSSU) sequences strongly support A. humida as a distinct species in the A. cinerea group. A surrogate key is provided to assist in the identification of all 28 aspicilioid species of Korea.
As the Aspicilia was comprising more than 300 species, the large genus has been classified into several infrageneric groups and some of them were finally splitted into some new genera or resurrected as old genera [1-6]. The genus Megaspora was newly introduced by the characteristics of large ascospores with thick walls and anastomosing paraphyses [7,8]. The genus Lobothallia was raised up from the A. radiosa group [9]. The old genus Circinaria (previously the A. contorta/calcarea group) was reintroduced by the characteristics of diverse thalli (crustose, foliose to subfruiticose), broad-ellipsoid to globose ascospores which are shown generally less than eight per ascus, and particularly the presence of aspicilin [3,4]. The old genus Sagedia was reintroduced based on the molecular analysis [3]. The genus Teuvoa was newly introduced by the characteristics of the lack of lobate, radiating thalli, generally absence of algal layer underlining hypothecium, the absence of secondary metabolites, and the substrate preference to barks or woods but not rocks, in comparing with Lobothallia [10]. The genus Oxneriaria (previously the A. mashiginensis group) was newly introduced by defining the characteristics of radiating thalli with wrinkled or lobate periphery, small ascospores, presence of substictic acid, and the habitat preference to polar and alpine areas [5]. The old genus Aspiciliella was reintroduced by the characteristics of consistently ellipsoid ascospores, small conidia, and the presence of norstictic acid in all species [11]. The infrageneric groups are further categorized into seven groups in Aspicilia s. str. [6]. The Aspicilia (200 spp.) is still considered the main genus of the family Megasporaceae (243 spp.) [12].Hue, a French lichenologist, first described the aspicilioid lichens of Korea including 15 species (Aspicilia adamanticola Hue, A. asteria Hue, A. chinnampoana Hue, A. dimorphodes Hue, A. exserta Hue, A. fauriana Hue, A. geographica Hue, A. leucera Hue, A. microsporeta Hue, A. stellata Hue, A. stenospora Hue, A. tofacea Hue, A. tumens Hue, A. umbrinella Hue, and A. vulcanica Hue) [13]. After a century, Kondratyuk discovered A. contorta ssp. hoffmanniana S. Ekman & Fröberg ex R. Sant. (syn. Circinaria hoffmanniana (S. Ekman & Fröberg ex R. Sant.) A. Nordin) in 2013 [14], and Aptroot and Moon recorded A. cinerea (L.) Körb., A. grisea Arnold, Circinaria caesiocinerea (Nyl. ex Malbr.) A. Nordin, Savić & Tibell, and C. leprosescens (Sandst.) A. Nordin, Savić & Tibell in 2014 [15]. Kondratyuk focused on the aspicilioid lichens of Korea in 2016 and eight species were introduced from Korea (A. pseudoabbasiana S.Y. Kondr., Lőkös & Hur, A. pseudovulcanica S.Y. Kondr., Lőkös & Hur, A. subepiglypta S.Y. Kondr., Lőkös & Hur, A. subgeographica S.Y. Kondr., Lőkös & Hur, A. subgoettweigensis S.Y. Kondr., Lőkös & Hur, A. submamillata S.Y. Kondr., Lőkös & Hur [16], A. geumodoensis S.Y. Kondr., Lőkös & Hur (syn. Rimularia geumodoensis (S.Y. Kondr., Lőkös & Hur) S.Y. Kondr., Lőkös & Hur and R. badioatra (Kremp.) Hertel & Rambold) [17]. Particularly, Paukov reclassified both A. dimorphodes and A. fauriana to A. intermutans (Nyl.) Arnold, and both A. geographica and A. microsporeta to Lecanora oreinoides (Körb.) Hertel & Rambold in 2017 [18]. Kondratyuk detected Rimularia gibbosa (Ach.) Coppins, Hertel & Rambold [19] and Yakovchenko introduced two Rimularia species such as R. badioatra and R. limborina Nyl. in 2018 [20]. Overall 27 species of the aspicilioid lichens were recorded in Korea.This study aimed to describe a new lichen-forming fungus in the genus Aspicilia. One of the field surveys for the lichen biodiversity in the forested wetlands of South Korea was carried out in a wetland forest of a high mountain, Gangwon Province in 2020, and two specimens of aspicilioid lichens were collected (Figure 1). The specimens were comprehensively analyzed in ecology, morphology, chemistry and molecular phylogeny and did not correspond to any previously known species. We describe them as a new species, Aspicilia humida, and this discovery contributes to the taxonomy with overall 28 taxa in the genus Aspicilia of Korea. The specimens are deposited in the herbarium of the Baekdudaegan National Arboretum (KBA, the herbarium acronym in the Index Herbariorum), South Korea.
Figure 1.
Specific collection site for the new species Aspicilia humida (black star mark).
Materials and methods
Morphological and chemical analyses
Specimen sections were prepared manually with a razor blade under a stereomicroscope (Olympus optical SZ51; Olympus, Tokyo, Japan), scrutinized under a compound microscope (Nikon Eclipse E400; Nikon, Tokyo, Japan) and pictured using a software program (NIS-Elements D; Nikon) and a DS-Fi3 camera (Nikon) mounted on a Nikon Eclipse Ni-U microscope (Nikon). The ascospores were examined at 1000× magnification in water. The length and width of the ascospores were measured and the range of spore sizes was shown with average, standard deviation (SD), length-to-width ratio, and the number of measured spores. Thin-layer chromatography (TLC) was performed using solvent systems A and C according to standard methods [21].
Isolation, DNA extraction, amplification, and sequencing
Hand-cut sections of 10–20 ascomata with thallus from the collected specimens were prepared for DNA isolation and DNA was extracted with a NucleoSpin Plant-II Kit in line with the manufacturer’s instructions (Macherey-Nagel, Düren, Germany). PCR amplifications for the internal transcribed spacer region (ITS1-5.8S-ITS2 rDNA), the mitochondrial small subunit, and the nuclear large subunit ribosomal RNA genes was achieved using the primers ITS5 and ITS4 [22], mrSSU1 and mrSSU3R [23], and LR0R and LR5 [24], respectively. The PCR thermal cycling parameters used were 95 °C (15 sec), followed by 35 cycles of 95 °C (45 sec), 54 °C (45 sec), and 72 °C (1 min), and a final extension at 72 °C (7 min) based on Ekman [25]. The annealing temperature was occasionally altered by ±1 degree in order to get a better result. PCR purification and DNA sequencing were accomplished by the Macrogen (Seoul, Korea).Specific collection site for the new species Aspicilia humida (black star mark).
Phylogenetic analyses
All ITS and mtSSU sequences (Table 1) were aligned and edited manually using ClustalW in Bioedit V7.2.6.1 [26]. All missing and ambiguously aligned data and parsimony-uninformative positions were removed and only parsimony-informative regions were finally analyzed in MEGA X [27]. The final alignment comprised 1163 (ITS) and 1058 (mtSSU) columns. In them, variable regions were 171 (ITS) and 120 (mtSSU). Finally, the phylogenetically informative regions were 444 (ITS) and 271 (mtSSU). Phylogenetic trees with bootstrap values were obtained in RAxML GUI 2.0 beta [28] using the maximum likelihood method with a rapid bootstrap with 1000 bootstrap replications and GTR GAMMA for the substitution matrix. The posterior probabilities were obtained in BEAST 2.6.4 [29] using the GTR 123141 (ITS) and the GTR 121323 (mtSSU) models, as the appropriate models of nucleotide substitution produced by the Bayesian model averaging methods with bModelTest [30], empirical base frequencies, gamma for the site heterogeneity model, four categories for gamma, and a 10,000,000 Markov chain Monte Carlo chain length with a 10,000-echo state screening and 1000 log parameters. Then, a consensus tree was constructed in TreeAnnotator 2.6.4 [29] with no discard of burnin, no posterior probability limit, a maximum clade credibility tree for the target tree type, and median node heights. All trees were displayed in FigTree 1.4.2 [31] and edited in Microsoft Paint. The bootstrapping and Bayesian analyses were repeated three times for the result consistency and no significant differences were shown for the tree shapes and branch values. The phylogenetic trees and DNA sequence alignments are deposited in TreeBASE under the study ID 28153. Overall analyses in the materials and methods were accomplished based on Lee and Hur [32].
Table 1.
Species list and DNA sequence information employed for phylogenetic analysis.
No.
Species
ID (ITS)
ID (mtSSU)
Voucher
1
Aspicilia abbasiana
KM609324
WDLC-20111154
2
Aspicilia aschabadensis
GU289916
Borisova1934 (LE)
3
Aspicilia berntii
EU502747
Nordin 6392 (UPS)
4
Aspicilia bicensis
KU341407
Anderson 16123 (NY)
5
Aspicilia blastidiata
KX129963
AGP20111009-01
6
Aspicilia brucei
JF703111
UPS:Owe-Larsson 9147
7
Aspicilia calcitrapa
JF703113
MARSSJ:Roux 24309
8
Aspicilia cinerea
EU057899
HM060695
Hermansson 13275 (UPS)
9
Aspicilia cinerea
HQ406799
HM060696
Nordin 5542 (UPS)
10
Aspicilia cinerea
HQ650637
DQ986890
AFTOL-ID 647
11
Aspicilia coronata
EU057901
Lattman 13.V.2006 (UPS)
12
Aspicilia desertorum
HQ406802
HM060689
Owe-Larsson 9814 (UPS)
13
Aspicilia dudinensis
EU057906
HM060710
Nordin 6036 (UPS)
14
Aspicilia dudinensis
MN906265
McCune 36017 (OSC)
15
Aspicilia dudinensis
HM060719
UPS:Nordin 5971
16
Aspicilia epiglypta
MH248866
MH248867
Nordin 7037 (UPS)
17
Aspicilia fluviatilis
HQ259264
UPS:Nordin 6188
18
Aspicilia granulosa
HQ259265
UPS:Nordin 6174
19
Aspicilia humida
MW832805
MW832823
BDNA-L-0000703
20
Aspicilia humida
MW832806
MW832824
BDNA-L-0000711
21
Aspicilia indissimilis
EU057909
HM060708
Nordin 5943 (UPS)
22
Aspicilia laevata
EU057910
HM060692
Tibell 23659 (UPS)
23
Aspicilia prestensis
JF703122
UPS:Roux 24883a
24
Aspicilia pseudoabbasiana
KY249599
KoLRI 018579
25
Aspicilia pseudovulcanica
KY249601
KoLRI 012338
26
Aspicilia pseudovulcanica
KY249602
KoLRI 012420
27
Aspicilia pseudovulcanica
KY249603
KoLRI 023829
28
Aspicilia subdepressa
JF703123
MARSSJ:Roux 24653
29
Aspicilia subepiglypta
KY249607
KoLRI 012535_2
30
Aspicilia subfarinosa
MN989235
Sipman & Raus 63720
31
Aspicilia subgeographica
KY249611
KoLRI 018704
32
Aspicilia subgoettweigensis
KY249616
KoLRI 007090
33
Aspicilia submamillata
KY249620
KoLRI 011146
34
Aspicilia subradians
HQ259267
UPS:Nordin 5984
35
Aspicilia verrucigera
EU057939
Tibell 22669 (UPS)
36
Aspiciliella intermutans
MH248863
MH248869
Roux 25790 (CR)
37
Circinaria affinis
HQ389194
Abbas 20081364 (H)
38
Circinaria caesiocinerea
HQ650636
DQ986892
AFTOL-ID 653
39
Circinaria calcarea
EU057898
Nordin 5888 (UPS)
40
Circinaria calcarea
AY853310
Wedin 6500 (UPS)
41
Circinaria cerebroides
JQ797534
Ringel 5138 (H)
42
Circinaria contorta
HQ650638
DQ986876
AFTOL-ID 1358
43
Circinaria cupreogrisea
EU057903
Nordin 6046 (UPS)
44
Circinaria esculenta
HQ406803
Owe-Larsson 9824 (UPS)
45
Circinaria esculenta
JQ797511
JQ797485
Owe-Larsson 9796 (UPS)
46
Circinaria fruticulosa
HQ389199
Vondrak 5188 (GBFS)
47
Circinaria fruticulosa
KC020253
ASPFRU 2361
48
Circinaria gibbosa
EU057908
HM060702
Nordin 5878 (UPS)
49
Circinaria gyrosa
JQ797528
JQ797487
Sohrabi 10401 A
50
Circinaria hispida
HQ171233
Sohrabi 15099
51
Circinaria jussuffii
JQ797518
Esnault 2033 (GZU)
52
Circinaria lacunosa
JQ797517
Abbas 940003 (H)
53
Circinaria leprosescens
EU057911
HM060711
Nordin 5906 (UPS)
54
Circinaria sphaerothallina
JQ797545
Sohrabi 9369
55
Lobothallia alphoplaca
JQ797516
JQ797480
Sohrabi 3677
56
Lobothallia alphoplaca
KT456207
KT456211
SK A20
57
Lobothallia melanaspis
JF825524
Owe-Larsson 8943a (UPS)
58
Lobothallia melanaspis
HM060688
UPS:Nordin 6622
59
Lobothallia praeradiosa
MK347501
MK348229
UFU L-1264
60
Lobothallia recedens
HQ406807
Nordin 6035 (UPS)
61
Lobothallia recedens
HM060724
UPS:Nordin 6582
62
Oxneriaria dendroplaca
HQ259259
HM060706
UPS:Nordin 5952
63
Oxneriaria mashiginensis
EU057912
HM060694
Nordin 5790 (UPS)
64
Oxneriaria permutata
EU057918
HM060709
Nordin 6027 (UPS)
65
Oxneriaria rivulicola
EU057922
HM060715
Nordin 5957 (UPS)
66
Oxneriaria supertegens
EU057936
HM060704
Owe-Larsson 9002 (UPS)
67
Oxneriaria verruculosa
EU057940
HM060703
Owe-Larsson 9007 (UPS)
68
Oxneriaria virginea
HQ259270
UPS:Nordin 6017a
69
Sagedia mastrucata
EU057913
HM060698
Nordin 5708 (UPS)
70
Sagedia nunatakkorum
KT630250
Malicek-228
71
Sagedia simoensis
EU057926
HM060701
Owe-Larsson 9000 (UPS)
72
Sagedia zonata
EU057946
HM060700
Owe-Larsson 8942 (UPS)
73
Teuvoa tibetica
GU289915
Obermayer 04386
Overall
68
34
DNA sequences for the new species Aspicilia humida (in bold) were generated in this study. All others were obtained from GenBank. The species names are followed by GenBank accession numbers and voucher information. ITS, internal transcribed spacer; mtSSU, mitochondrial small subunit; Voucher, voucher information.
Species list and DNA sequence information employed for phylogenetic analysis.DNA sequences for the new species Aspicilia humida (in bold) were generated in this study. All others were obtained from GenBank. The species names are followed by GenBank accession numbers and voucher information. ITS, internal transcribed spacer; mtSSU, mitochondrial small subunit; Voucher, voucher information.
Results and discussion
Two independent phylogenetic trees for the genus Aspicilia and related genera were produced from 98 sequences (66 for ITS, and 32 for mtSSU) from GenBank and four new sequences (each two for ITS and mtSSU) from the new species (Table 1). The new species was positioned in the A. cinerea group in both trees. The ITS tree describes that the new species is located in a clade with A. subfarinosa (J. Steiner) Şenkard. & Sohrabi and Circinaria hispida (Mereschk.) A. Nordin, Savić & Tibell, represented by a bootstrap value of 98 and a posterior probability of 0.7 (not shown) for the branch. Other species, such as A. abbasiana S.Y. Kondr., Lőkös, Ismayil & S.Y. Guo, A. blastidiata Paukov, A. Nordin & Tibell, A. cinerea, A. dudinensis (H. Magn.) Oxner, A. pseudoabbasiana, A. pseudovulcanica, A. subepiglypta, A. subdepressa Arnold, A. subgeographica, A. subgoettweigensis, and A. submamillata, are closely located to the new species in the A. cinerea group, represented just by a bootstrap value of 79 for the branch (Figure 2). The mtSSU tree shows that the new species is solely located in the A. cinerea group. Closely positioned species to the new species are A. cinerea, A. dudinensis, A. indissimilis (H. Magn.) Räsänen, and A. laevata (Ach.) Arnold, represented by a bootstrap value of 95 and a posterior probability of 1 for the branch (Figure 3). The phylogenetic analyses did not designate any species identical to the new species in the genus Aspicilia.
Figure 2.
Phylogenetic relationship among available species in the genus Aspicilia based on a maximum likelihood analysis of the dataset of ITS sequences. The tree was rooted with six Lobothallia and Teuvoa sequences. Maximum likelihood bootstrap values ≥ 70% and posterior probabilities ≥ 95% are shown above internal branches. Branches with bootstrap values ≥ 90% are shown in bold. The new species Aspicilia humida is presented in bold, and all species names are followed by the Genbank accession numbers. Reference Table 1 provides the species related to the specific GenBank accession numbers and voucher information.
Figure 3.
Phylogenetic relationships among available species in the genus Aspicilia based on a maximum likelihood analysis of the dataset of the mitochondrial small subunit (mtSSU) sequences. The tree was rooted with five Lobothallia sequences. Maximum-likelihood bootstrap values ≥ 70% and posterior probabilities ≥ 95% are shown above internal branches. Branches with bootstrap values ≥ 90% are shown in bold. The new species Aspicilia humida is presented in bold, and all species names are followed by the GenBank accession numbers. Reference Table 1 provides the species related to the specific GenBank accession numbers and voucher information.
Phylogenetic relationship among available species in the genus Aspicilia based on a maximum likelihood analysis of the dataset of ITS sequences. The tree was rooted with six Lobothallia and Teuvoa sequences. Maximum likelihood bootstrap values ≥ 70% and posterior probabilities ≥ 95% are shown above internal branches. Branches with bootstrap values ≥ 90% are shown in bold. The new species Aspicilia humida is presented in bold, and all species names are followed by the Genbank accession numbers. Reference Table 1 provides the species related to the specific GenBank accession numbers and voucher information.Phylogenetic relationships among available species in the genus Aspicilia based on a maximum likelihood analysis of the dataset of the mitochondrial small subunit (mtSSU) sequences. The tree was rooted with five Lobothallia sequences. Maximum-likelihood bootstrap values ≥ 70% and posterior probabilities ≥ 95% are shown above internal branches. Branches with bootstrap values ≥ 90% are shown in bold. The new species Aspicilia humida is presented in bold, and all species names are followed by the GenBank accession numbers. Reference Table 1 provides the species related to the specific GenBank accession numbers and voucher information.
Taxonomy
No: MB839181Figure 4
Figure 4.
Aspicilia humida (BDNA-L-0000703, holotype for A–K; BDNA-L-0000711, paratype for L & M) in morphology. (A–D): Habitus and apothecia emerging single to several per an areole; (E): Adnate apothecia without constriction at the base in section; (F): Epihymenium in olive-brown pigment; (G–J): Clavate asci with eight spores; (K): Ellipsoid or globose ascospores with no septation; (L): Immersed pycnidia; (M): Thread-like pycnoconidia. Bars: A–D 1 mm; E 200 μm; F 50 μm; G–K 10 μm; L 100 μm; M 10 μm.
Aspicilia humida (BDNA-L-0000703, holotype for A–K; BDNA-L-0000711, paratype for L & M) in morphology. (A–D): Habitus and apothecia emerging single to several per an areole; (E): Adnate apothecia without constriction at the base in section; (F): Epihymenium in olive-brown pigment; (G–J): Clavate asci with eight spores; (K): Ellipsoid or globose ascospores with no septation; (L): Immersed pycnidia; (M): Thread-like pycnoconidia. Bars: A–D 1 mm; E 200 μm; F 50 μm; G–K 10 μm; L 100 μm; M 10 μm.
Diagnosis
Aspicilia humida differs from A. aquatica by the absence of prothallus (vs. thick gray prothallus), black disk without green color in water (vs. black disk with translucent green when wet), olive-brown epihymenium (vs. olive-green epihymenium), shorter hymenium (50–60 μm vs. 150–170 μm), hymenium I + yellowish blue-green (vs. hymenium I + blue or turning dark red-brown), wider paraphysial tips without vivid pigment (4.5–6 μm wide vs. blackened tips in 2–5 μm wide), smaller asci (64–72 × 17–27 μm vs. 80–140 × 25–35 μm), smaller ascospores (10.5–23 × 6–13.5 μm vs. 20–35 × 13–20 μm), and the presence of stictic acid (vs. no substance).
Type
South Korea, Gangwon Province, Pyeongchang-gun, Daegwallyeong-myeon, Hoenggye-ri, a forest wetland, 37°46'0.02"N, 128°42'19.58"E, 1,047 m alt., on siliceous rock, 03 June 2020, B. G. Lee & H. J. Lee 2020-000503, with Diplotomma alboatrum (Hoffm.) Flot. and Endocarpon maritimum Y. Joshi & Hur (holotype: BDNA-L-0000703!; GenBank MW832805 for ITS, MW832823 for mtSSU, and MW832826 for LSU); same locality, on siliceous rock, 03 June 2020, B. G. Lee & H. J. Lee 2020-000511, (paratype: BDNA-L-0000711; GenBank MW832806 for ITS, MW832824 for mtSSU, MW832827 for LSU).Thallus saxicolous, crustose, mainly areolate and partially rimose, pale gray to white, margin determinate, not pruinose, 175–300 μm thick; cortex hyaline, 25–30 μm thick; medulla 25–30 μm thick; photobiont coccoid, algal layer 35–50 μm thick, cells globose to subglobose, 5–15 μm. Small crystals in cortex, medulla and between algal cells, not dissolving in K. Prothallus inconspicuous.Apothecia abundant, generally rounded but subangular or even irregular when several apothecia contiguous or coalescent, emerging single to several per an areole, adnate when mature, not constricted at the base, 0.2–1.7 mm diam. Disk flat or somewhat concave, smooth or slightly rugose, not pruinose, black from the beginning and partially paler when old, 100–130 μm thick; lecanorine, thalline margin present and same color to thallus or slightly darker, proper margin indistinct. Amphithecium well-developed, with small crystals in both cortical layer and medulla, crystals extending to the base, not dissolving in K, 90–100 μm wide laterally, 50–60 μm wide at periphery. Parathecium inconspicuous, hyaline but olive-brown at periphery, 10–15 μm wide laterally, 15–25 μm wide at periphery, disappearing to the base. Epihymenium olive green to brown, smooth and not granular, brown pigment dissolving in K, 10–15 μm high. Hymenium hyaline, 50–60 μm high, I + yellowish blue-green. Hypothecium hyaline, 25–50 μm high. Oil droplets present mainly in hypothecium and also along paraphyses in hymenium. Paraphyses septate, anastomosing, 2–2.5 μm wide, simple or branched at tips, tip cells somewhat bead-like (moniliform), bead-like formation clearer in staining, swollen but not pigmented, 4.5–6 μm wide. Asci clavate, 8-spored, 64–72 × 17–27 μm (n = 5). Ascospores constantly simple, ellipsoid or somewhat globose, 10.5–23 × 6–13.5 μm (mean = 17.3 × 9.8 μm; SD = 2.6 (L), 1.5 (W); L/W ratio 1.2–2.7, ratio mean = 1.8, ratio SD = 0.3; n = 106). Pycnidia immersed, ostiolar region slightly projected, rounded, black, 250–275 × 200–230 μm. Pycnoconidia thread-like, straight, slightly curved or v-shaped, 5.5–28 × 0.5–1.0 μm (mean = 15.1 × 0.7 μm; SD = 3.7 (L), 0.1 (W), n = 110)
Chemistry
Thallus K–, KC–, C–, Pd–. Medulla K + yellow, I–. UV + gray to dull white. Stictic acid was detected by TLC.
Distribution and ecology
The species occurs on a siliceous rock nearby a stream in an open wetland forest of a high mountain. The species is currently known from the type collections.
Etymology
The species epithet indicates the lichen’s geography, namely a humid wetland.
Notes
The new species is similar to A. aquatica, A. vulcanica and A. pseudovulcanica in having white to gray thallus with negative reaction in K among saxicolous species. However, the new species differs from A. aquatica by the absence of prothallus, black disk without green color in water, olive-brown epihymenium, shorter hymenium, hymenium I + yellowish blue-green, wider paraphysial tips without vivid pigment, smaller asci, smaller ascospores, and the presence of stictic acid [33,34].The new species is different from A. vulcanica by apothecia emerging one to several per single areole, larger apothecia, narrower paraphyses, shorter and wider asci, and the substrate preference to siliceous rock [13,16].The new species is distinguished from A. pseudovulcanica by thicker, larger apothecia without pruina, shorter hymenium, smaller ascospores [16]. Reference Table 2 provides the key characteristics distinguishing A. humida from the compared species above.
Table 2.
Comparison of Aspicilia humida with closely-related species.
The morphological and chemical characteristics for several species close to the new species are referenced from the previous literature. All information on the new species is produced from type specimens (BDNA-L-0000703 and BDNA-L-0000711) in this study. The brackets for Aspicilia vulcanica, i.e. disk color and hymenium height, are assumed from previous literature.
Comparison of Aspicilia humida with closely-related species.The morphological and chemical characteristics for several species close to the new species are referenced from the previous literature. All information on the new species is produced from type specimens (BDNA-L-0000703 and BDNA-L-0000711) in this study. The brackets for Aspicilia vulcanica, i.e. disk color and hymenium height, are assumed from previous literature.The new species is further compared with A. straminella Hue and A. verrucigera Hue in having grayish, areolate thallus and K + yellow medulla in saxicolous species. However, A. straminella is different from the new species by thicker and straw-gray thallus, smaller apothecia, taller hymenium and wider ascospores [13,16]. Aspicilia verrucigera differs from the new species by thicker and darker thallus occasionally with brown color, smaller apothecia, taller hymenium, wider ascospores and the presence of norstictic acid [16,33].
Key to aspicilioid species of Korea (28 taxa)
Overall 28 species have been recorded for the aspicilioid lichens including the genera Aspicilia, Circinaria, Lecanora, and Rimularia in Korea, except for synonyms. For synonyms after taxonomic revision, A. adamanticola is corresponded to A. cinerea [18], A. contorta ssp. hoffmanniana is reclassified to C. hoffmanniana [35], A. geographica and A. microsporeta are conspecific to L. oreinoides [18], A. dimorphodes and A. fauriana are indistinguishable to A. intermutans [18], and A. geumodoensis is reclassified to R. geumodoensis [18]. This key is revised from Kondratyuk’s work [16] only for Korea territory, and seven more species are included such as A. grisea, A. humida, A. intermutans, C. caesiocinerea, C. hoffmanniana, L. oreinoides, and R. limborina. A. exserta is corrected from A. excerta of Kondratyuk’s work [16].Paraphysis cells not bead-like, disk umbonate or gyrose..2Paraphysis cells bead-like (moniliform), disk generally smooth ..5Thallus C– or C ± pink (not or containing ± gyrophoric acid), hymenium up to 150 μm, ascospores 18–30 × 10–18 μm ..Thallus C + red (containing gyrophoric acid), hymenium up to 120 μm, ascospores 10–25 × 7–13 μm..3Thallus lighter, whitish gray, ascospores 20–25 × 9–13 μm....Thallus darker, pinkish brown to gray brown, ascospores 10–25 × 7–13 μm..4Thallus pinkish brown to dark gray-brown, hymenium 70–100 μm, apothecia 0.2–0.4 mm diam., disk concave to umbonate, ascospores 10–22 × 7–13 μm....Thallus pale gray-brown to beige, hymenium up to 75 μm, apothecia 0.5–0.8 mm diam., disk slightly convex, ascospores 16–25 × 10–13 μm....Thallus or medulla K + red or K + yellow turning to red (containing norstictic acid) ....6Thallus or medulla K– red or K + yellow (containing aspicilin or stictic acid, but not containing norstictic acid) ..16Thallus with farinose-erose soredia..Thallus without soredia7Apothecia rare or solitary per areole when present..8Apothecia occurring one to several per areole..12Thallus whitish..9Thallus grayish to brownish..11Thallus thin, apothecia 0.2–0.3 mm diamThallus thick, apothecia 0.5–1.5 mm diam. ..10Asci 120 × 24 μm, ascospores 15–20 × 9–10 μm..Asci 80 × 16 μm, ascospores 17–20 × 7–8 μm.Apothecia 0.3–0.5 mm diam., ascospores 16–20 × 6–7 μm..Apothecia 0.4–1.0 mm diam., ascospores 12–19 × 7–11 μm..Thallus white without grayish or brownish color..13Thallus white-gray or gray to gray-brown..14Thallus thin 0.16–0.22 mm thick, apothecia occurring one to two per areole, 0.4–0.8 mm diam. ..Thallus thick 0.5–0.6 mm thick, apothecia occurring one to several per areole, 0.3–0.5 mm diam. ..Apothecia 0.2–0.3 mm diam., occurring three to five per areole, conidia 15–20 × 0.7–0.9 μm..Apothecia 0.4–1.2 mm diam., occurring one to three per areole, conidia 7–16 × 1 μm..15Apothecia occurring one to two per areole, ascospores 12–22 × 6–13 μm, conidia 11–16 × 1 μm..Apothecia occurring two to three per areole, ascospores 22–28 × 12–14 μm, conidia 7–11 × 1 μm..On calcareous or volcanic rocks..17On siliceous rocks..18On calcareous rocks, thallus with pruina, apothecia prominent, black, asci 4-spored....On volcanic rocks, thallus without pruina, apothecia immersed, flesh-colored (beige), asci 8-spored..Thallus with soredia or isidia, containing aspicilin..Thallus without soredia or isidia..19Thallus areolate, thick (0.4–0.6 mm thick) ..20Thallus areolate to rimose or subsquamulose, thin or thick..23Thallus with pruina..21Thallus without pruina..22Apothecia 0.2–0.5 mm diam., disk blackish with grayish pruina..Apothecia 0.4–1.0 mm diam., disk gray to brownish with white pruina.Thallus dark gray to lead-gray, apothecia 0.25–0.3 mm diam., ascospores 17–22 × 8–12 μm, conidia 13–17 × 0.7–0.8 μm..Thallus light gray to slightly brownish gray, apothecia 0.9–1 mm diam., ascospores 19–22 × 12–16 μm, conidia 3.5–5.5 × 0.7–0.8 μm..Thallus with pruina..24Thallus without pruina..26Thallus thick (up to 0.4 mm thick), white to cream white, or pale yellow, apothecia occurring one to three per areole, ascospores 9–14 × 4–6.5 μm...........Thallus thin, white, light gray or pale brown, apothecia occurring one to two per areole, ascospores 16–24 × 9–14 μm..25Apothecia 0.2–0.5 mm diam., thallus white or pale brown......................Apothecia 0.5–0.9 mm diam., thallus white-gray to light gray.................Thallus subsquamulose in center, ascospores 14–30 × 7–16 μm, containing aspicilin........Thallus areolate to rimose only, ascospores 10–23 × 6–14 μm, not containing aspicilin27Thallus bluish gray, apothecia mostly solitary per areole, rarely two, 0.2–0.5 mm diam., asci 100–132 × 22–26 μm, ascospores 16–20 × 10–14 μm......Thallus pale gray to white, apothecia occurring one to several per areole, 0.2–1.7 mm diam., asci 64–72 × 17–27 μm, ascospores 10.5–23 × 6–13.5 μm, containing stictic acid..
Authors: Remco Bouckaert; Timothy G Vaughan; Joëlle Barido-Sottani; Sebastián Duchêne; Mathieu Fourment; Alexandra Gavryushkina; Joseph Heled; Graham Jones; Denise Kühnert; Nicola De Maio; Michael Matschiner; Fábio K Mendes; Nicola F Müller; Huw A Ogilvie; Louis du Plessis; Alex Popinga; Andrew Rambaut; David Rasmussen; Igor Siveroni; Marc A Suchard; Chieh-Hsi Wu; Dong Xie; Chi Zhang; Tanja Stadler; Alexei J Drummond Journal: PLoS Comput Biol Date: 2019-04-08 Impact factor: 4.475