| Literature DB >> 35288444 |
Radoslaw Marek Debiec1,2, Stephen E Hamby3, Peter D Jones3, Kassem Safwan4, Michael Sosin5, Simon Lee Hetherington6, David Sprigings7, David Sharman7, Kelvin Lee8, Pegah Salahshouri9, Nigel Wheeldon10, Andrew Chukwuemeka11, Vasiliki Boutziouka3, Mohamed Elamin12, Sue Coolman3, Manish Asiani3, Shireen Kharodia3, Gregory J Skinner2, Nilesh J Samani3, Tom R Webb3, Aidan P Bolger3,2.
Abstract
INTRODUCTION: Bicuspid aortic valve (BAV) affects 1% of the general population. NOTCH1 was the first gene associated with BAV. The proportion of familial and sporadic BAV disease attributed to NOTCH1 mutations has not been estimated. AIM: The aim of our study was to provide an estimate of familial and sporadic BAV disease attributable to NOTCH1 mutations.Entities:
Keywords: bicuspid aortic valve; genetics
Mesh:
Substances:
Year: 2022 PMID: 35288444 PMCID: PMC9240330 DOI: 10.1136/heartjnl-2021-320428
Source DB: PubMed Journal: Heart ISSN: 1355-6037 Impact factor: 7.365
Figure 1Family trees and phenotypic information of eight pedigrees with familial form of BAV disease. AD, aortic dissection; AS, aortic valve stenosis; BAV, bicuspid aortic valve (R+L, right-coronary and left-coronary cusp fusion; R+N, right-coronary and non-coronary leaflet fusion; U, unknown leaflet fusion pattern); CoA, coarctation of aorta; TAA, thoracic aortic aneurysm; VSD, ventricular septal defect.
Clinical characteristics of patients
| Familial patients | Sporadic patients (n=381) | P value | ||
| Males, n (%) | 14 (67) | 277 (73) | 0.6165 | |
| Age at recruitment (median) | 40.2 | 52.1 | 0.0216 | |
| White ethnicity | 21 (100) | 300 (79) | 0.0111 | |
| Leaflet fusion pattern, | RL | 10 (52) | 231 (61) | 1.0 |
| RN | 2 (11) | 68 (18) | 0.7417 | |
| LN | 1 (5) | 12 (3) | 0.4188 | |
| NA | 6 (32) | 70 (18) | – | |
| TAA, n (%) | 11 (52) | 137 (36) | 0.1629 | |
| CoA, n (%) | 2 (10) | 57 (15) | 0.7521 | |
| VSD, n (%) | 1 (5) | 15 (4) | 0.5833 | |
P values calculated with the Fisher’s exact test for the comparison between categorical variables and with the Mann-Whitney U test for the group comparison of continuous variables.
*Two individuals diagnosed with aortic stenosis but carriers of pathogenic p.Tyr291*/c.873C>G NOTCH1 variant.
AS, aortic stenosis; BAV, bicuspid aortic valve; CoA, coarctation of aorta; LN, fusion of left-coronary and non-coronary cusps; NA, leaflet fusion pattern not available; RL, fusion of right-coronary and left-coronary cusp; RN, fusion of right-coronary and non-coronary cusps; TAA, thoracic aortic aneurysm; VSD, ventricular septal defect.
Genetic variants co-segregating with affection status within the pedigrees with familial form of BAV disease
| Variant ID | Pedigree ID | Location | MAF (gnomAD) | Function | Pathogenicity class |
| NA | B | p.Tyr291*/c.873C>G | – | Stop gained | Pathogenic |
| rs2229975 | C | p.Pro284Pro/c.852G>A | 0.1335 | Synonymous variant | Benign |
| rs3812605 | H | c.3171+220A>G | 0.6629 | Intron variant | Uncertain significance |
| rs11145764 | E | c.4015-73G>A | 0.4800 | Intron variant | Benign |
| rs3124598 | E | c.2970-31A>G | 0.6431 | intron variant | Benign |
| rs9411208 | C | c.1441+7C>T | 0.5782 | Intron variant | Benign |
| rs11145765 | D | c.3171+42G>A | 0.09654 | Intron variant | Benign |
| rs3124999 | H | c.5639-174G>A | 0.4420 | Intron variant | Benign |
| rs3124603 | B | c.1670-9A>G | 0.4656 | Intron variant | Benign |
| rs4880100 | B | c.1556-133A>G | 0.4746 | Intron variant | Benign |
| rs10781498 | B | c.1555+102C>T | 0.4246 | Intron variant | Benign |
| rs11145767 | B | c.1555+10A>G | 0.000004923 | Intron variant | Benign |
| rs3125009 | B | c.1100-140G>A | 0.4267 | Intron variant | Benign |
BAV, bicuspid aortic valve; MAF, minor allele frequency; NA, not available.
NOTCH1 genetic variants (MAF frequency of <0.001 and CADD score >20 or MAF <0.0001) identified among 381 patients with sporadic BAV disease
| Variant ID | Location | MAF (gnomAD) | Coding change | Protein change | CADD | Pathogenicity class |
| rs199652954 | chr9:139 395 162 | 0.00007 | c.5776C>T | p.Arg1926Cys | 32 | Likely benign |
| rs368400902 | chr9:139 401 182 | 0.00003 | c.3887G>A | p.Arg1296His | 29.0 | Likely benign |
| rs375119074 | chr9:139 391 041 | 0.000004 | c.7150C>G | p.Gln2384Glu | 18.49 | Uncertain significance |
| rs1166328821 | chr9:139 399 309 | – | c.4834G>A | p.Gly1612Ser | 23.6 | Uncertain significance |
| rs367825691 | chr9:139 413 921 | 0.0001 | c.839A>G | p.Asn280Ser | 23.9 | Likely benign |
| rs543533126 | chr9:139 391 893 | 0.00003 | c.6298A>G | p.Ile2100Val | 21.8 | Likely benign |
| rs375065108 | chr9:139 417 517 | 0.00005 | c.527G>A | p.Arg176Gln | 21.2 | Benign |
| rs1334842062 | chr9:139 395 258 | 0.000004 | c.5680G>A | p.Gly1894Ser | 25.1 | Uncertain significance |
| rs1212259128 | chr9:139 418 258 | 0.000008 | c.314C>G | p.Ala105Gly | 18.97 | Uncertain significance |
BAV, bicuspid aortic valve; MAF, minor allele frequency.
Figure 2Study design and key findings. BAV, bicuspid aortic valve; BRAVE, Bicuspid aoRtic vAlVe gEnetic research; CoA, coarctation of aorta; VSD, ventricular septal defect.