| Literature DB >> 35287352 |
Ji Wu1, Zhenhua Wang1, Shanling Xu2, Yang Fu1, Yi Gao1, Zuxiang Wu1, Yun Yu1, Yougen Yuan3, Lin Zhou3, Ping Li1.
Abstract
Background: Septic cardiomyopathy (SC) is a common complication of sepsis that leads to an increase in mortality. The pathogenesis of septic cardiomyopathy is unclear, and there is currently no effective treatment. EGCG (epigallocatechin gallate) is a polyphenol that has anti-inflammatory, antiapoptotic, and antioxidative stress effects. However, the role of EGCG in septic cardiomyopathy is unknown.Entities:
Keywords: Apoptosis; EGCG; Inflammation; Network pharmacology; Septic cardiomyopathy
Year: 2022 PMID: 35287352 PMCID: PMC8917800 DOI: 10.7717/peerj.12994
Source DB: PubMed Journal: PeerJ ISSN: 2167-8359 Impact factor: 2.984
Figure 1Flow chart of the analysis process in this study.
Primers sequences of hub genes.
| Gene | Primer nucleotide sequence |
|---|---|
| IL-6 | Forward: 5′-CTGGTCTTCTGGAGTTCCGTTTCTAC-3′ |
| Reverse: 5′-GATGAGTTGGATGGTCTTGGTCCTTAG-3′ | |
| TNF | Forward: 5′-CCACGCTCTTCTGTCTACTGAACTTC-3′ |
| Reverse: 5′-GGTATGAAATGGCAAATCGGCTGAC-3′ | |
| MAPK3 | Forward: 5′ATAGGCATCCGAGACATCCTCAGAG-3′ |
| Reverse: 5′-TTAAGGTCGCAGGTGGTGTTGATAAG-3′ | |
| VEGFA | Forward: 5′GGAGGAAGAGAAGGAAGAGGAGAGG-3′ |
| Reverse: 5′-CATGGTGGAGGTACAGCAGTAAAGC-3′ | |
| AKT1 | Forward: 5′AGAGGCAGGAAGAAGAGACGATGG-3′ |
| Reverse: 5′-GCAGGACACGGTTCTCAGTAAGC-3′ | |
| Caspase3 | Forward: 5′CACTGGAATGTCATCTCGCTCTGG-3′ |
| Reverse: 5′-GTCGCCTCTGAAGAAGCTAGTCAAC-3′ |
Figure 2(A) Molecular structure of EGCG. and potential targets. (B) The Venn diagram represen 541 EGCG targets and intersects 744 key genes of septic cardiomyopathy to obtain 182 potential targets. (C) The blue diamond represents the key gene of septic cardiomyopathy, the green octagon represents the target of EGCG, and the red square represents the potential target of EGCG in the treatment of septic cardiomyopathy.
Figure 3MCODE in Cytoscape software was used to analyze the PPI network and four functional module clusters were obtained according to different scores.
Figure 4Five topological analysis methods of CytoHubba plug-in of Cytoscape software were used to analyze the gene clusters with a score of 52.273, and six key targets of EGCG in the treatment of septic cardiomyopathy were obtained.
Figure 5GO enrichment analysis of potential targets.
The binding energy values of EGCG and core targets.
| Compund | Targets | Binding affinity/ (kcal/mol) |
|---|---|---|
| EGCG | IL-6 | −5.73 |
| EGCG | TNF | −7.86 |
| EGCG | MAPK3 | −6.81 |
| EGCG | VEGFA | −5.45 |
| EGCG | AKT1 | −6.26 |
| EGCG | Caspase3 | −7.07 |
Figure 6Molecular docking simulation of EGCG-target binding.
Figure 7Treatment of EGCG ameliorated cardiac dysfunction and histopathological injury in heart induced by LPS.
Figure 8The mRNA expression of the key genes of EGCG in the treatment of septic cardiomyopathy in each group of mice.
Figure 9The schematic diagram of EGCG in the treatment of septic cardiomyopathy.