| Literature DB >> 35284894 |
Sergio E Bermúdez C1,2, María L Félix3, Lillian Domínguez A1, Nathaniel Kadoch4, Sebastián Muñoz-Leal5, José M Venzal3.
Abstract
The first molecular screening for Rickettsia, Anaplasma, Ehrlichia, Borrelia, Babesia and Hepatozoon was carried out in questing Ixodes cf. boliviensis and Ixodes tapirus from Talamanca Mountains, Panama, using specific primers, sequencing and phylogeny. Phylogenetic analyses for the microorganisms in Ixodes cf. boliviensis confirmed the presence of Rickettsia sp. strain IbR/CRC endosymbiont (26/27 ticks), three genotypes of the Borrelia burgdorferi (sensu lato) complex (4/27 ticks), Babesia odocoilei (1/27 ticks), and Hepatozoon sp. (2/27 ticks), tentatively designated Hepatozoon sp. strain Chiriquensis. Phylogenetic analyses for the microorganisms in I. tapirus revealed an undescribed Rickettsia sp., tentatively designated Rickettsia sp. strain Itapirus LQ (6/6 ticks), and Anaplasma phagocytophilum (2/6 ticks). To the best of our knowledge, this is the first report of B. burgdorferi (s.l.) complex, A. phagocytophilum, B. odocoilei, and Hepatozoon sp. in Ixodes ticks from Central America, and also the first detection of Rickettsia spp. in Ixodes species in Panama. In light of the importance of these findings, further studies are needed focusing on the role of I. tapirus and I. cf. boliviensis as vectors, and the vertebrates acting as reservoirs.Entities:
Keywords: Anaplasma phagocytophilum; Babesia odocoilei; Borrelia burgdorferi (s.l.) complex; Hepatozoon sp.; Ixodes cf. boliviensis; Ixodes tapirus; Panama; Rickettsia spp. endosymbionts
Year: 2021 PMID: 35284894 PMCID: PMC8906142 DOI: 10.1016/j.crpvbd.2021.100034
Source DB: PubMed Journal: Curr Res Parasitol Vector Borne Dis ISSN: 2667-114X
Fig. 1A General view of Panama with Volcan Baru National Park and La Amistad International Park (black rectangle). BIxodes cf. boliviensis, female. CIxodes tapirus, female. DIxodes cf. boliviensis, male. EIxodes tapirus, male
List of the PCR primers used in the present study
| Targeted microorganism | Gene | Primer name | Sequence | Length (bp) | Reference |
|---|---|---|---|---|---|
| Tick (mitochondrial) | 16S + 1 | CCGGTCTGAACTCAGATCAAG | 460 | ||
| 16S-1 | GCTCAATGATTTTTTAAATTGCTG | ||||
| CS-78 | GCAAGTATCGGTGAGGATGTAAT | 401 | |||
| CS323 | GCTTCCTTAAAATTCAATAAATCAGGAT | ||||
| CS-239 | GCTCTTCTCATCCTATGGCTATTAT | 834 | |||
| CS-1069 | CAGGGTCTTCGTGCATTTCTT | ||||
| Rr190.70p | ATGGCGAATATTTCTCCAAAA | 532 | |||
| Rr190.602n | AGTGCAGCATTCGCTCCCCCT | ||||
| ompB-OF | GTAACCGGAAGTAATCGTTTCGTAA | 511 | |||
| ompB-O | GCTTTATAACCAGCTAAACCACC | ||||
| ompB SFG IF | GTTTAATACGTGCTGCTAACCAA | 420 | |||
| ompB SFG IR | GGTTTGGCCCATATACCATAAG | ||||
| EHR16SD | AGAGTTTGATCCTGGCTCAG | 1500 | |||
| EHR16SR | ACGGCTACCTTGTTACGACTT | ||||
| Dsb-330 | GATGATGTTTGAAGATATSAAACAAAT | 409 | |||
| Dsb-720 | CTATTTTACTTCTTAAAGTTGATAWATC | ||||
| Dsb-380 | ATTTTTAGRGATTTTCCAATACTTGG | ||||
| HS1a | AITGGGCTGGTAITGAAAT | 1297 | |||
| HS6a | CCICCIGGIACIAIACCTTC | ||||
| HS43 | ATWGCWAARGAAGCATAGTC | ||||
| HSVR | CTCAACAGCAGCTCTAGTAGC | ||||
| LoneTop | CTGGCAGTGCGTCTTAAGCA | 869 | |||
| Tec1a/p | TCTTGCGAGCATACTCCCCAG | ||||
| Fla LL | ACATATTCAGATGCAGACAGAGGT | 665 | |||
| Fla RL | GCAATCATAGCCATTGCAGATTGT | ||||
| FlaRS | CTTTGATCACTTTCATTCTAATAGC | ||||
| FlaLS | AACAGCTGAAGAGCTTGGAAT | ||||
| Fla LS | AACAGCTGAAGAGCTTGGAATG | 354 | |||
| Fla RS | CTTTGATCACTTATCATTCTAATAGC | ||||
| Piroplasmid | BAB 143-167 | CCGTGCTAATTGTAGGGCTAATACA | 551 | ||
| BAB 694-667 | GCTTGAAACACTCTARTTTTCTCAAAG |
Percent identity of 16S rDNA sequences of Ixodes cf. boliviensis and other Ixodes spp. available on GenBank
| 1 | 2 | 3 | 4 | 5 | 6 | ||
|---|---|---|---|---|---|---|---|
| 1 | – | ||||||
| 2 | 99.02 | – | |||||
| 3 | 99.26 | 99.51 | – | ||||
| 4 | 99.26 | 99.51 | 100 | – | |||
| 5 | 98.78 | 99.02 | 99.51 | 99.51 | – | ||
| 6 | 93.17 | 92.43 | 92.68 | 92.68 | 93.17 | – |
Microorganisms detected in Ixodes cf. boliviensis and Ixodes tapirus from highlands of western Panama
| Microorganism | LAIP | VBNP | |||
|---|---|---|---|---|---|
| ♀ ( | ♂ ( | ♀ ( | ♂ ( | ♀ ( | |
| 15 (88.2) | 5 (83.3) | 1 (33.3) | 0 | 0 | |
| 0 | 0 | 0 | 0 | 6 (100) | |
| 0 | 0 | 0 | 0 | 2 (33.3) | |
| 2 (11.0) | 0 | 0 | 0 | 0 | |
| 1 (5.8) | 0 | 0 | 0 | 0 | |
| 1 (5.8) | 0 | 0 | 0 | 0 | |
| 0 | 1 (16.7) | 1 (33.3) | 0 | 0 | |
| 2 (11.8) | 0 | 0 | 0 | 0 | |
Abbreviations: LAIP, La Amistad National Park, Las Nubes Station; VBNP, Volcán Barú National Park, Los Quetzales trail.
Fig. 2Bayesian phylogenetic trees for Rickettsia spp. based on the gltA (A) and ompA (B) genes. Bayesian posterior probabilities are shown at the nodes (only values > 0.95 are shown). Rickettsia sibirica and Rickettsia parkeri were used as the outgroup. The newly generated sequences are indicated in bold
Fig. 3Bayesian phylogenetic trees for Anaplasma phagocytophilum based on the 16S rDNA (A) and groEl (B) genes. Bayesian posterior probabilities are shown at the nodes (only values > 0.95 are shown). Ehrlichia ruminantium was used as the outgroup. The newly generated sequences are indicated in bold
Fig. 4Bayesian phylogenetic trees for Borrelia spp. based on the flaB gene. Bayesian posterior probabilities are shown at the nodes (only values > 0.95 are shown). Borrelia turcica and Borrelia tachyglossi were used as the outgroup. The newly generated sequences are indicated in bold
Fig. 5Bayesian phylogenetic tree for Hepatozoon spp. based on the 18S rRNA gene. Bayesian posterior probabilities are shown at the nodes (only values > 0.95 are shown). Adelina grylli was used as the outgroup. The newly generated sequence is indicated in bold
Fig. 6Bayesian phylogenetic trees for Babesia based on the 18S rRNA gene. Bayesian posterior probabilities are shown at the nodes (only values > 0.95 are shown). Theileria parva was used as the outgroup. The newly generated sequence is indicated in bold