| Literature DB >> 35284702 |
María E Acosta1, Lourdes Gotopo2, Neira Gamboa1, Juan R Rodrigues1, Genesis C Henriques1, Gustavo Cabrera2, Angel H Romero3.
Abstract
The β-hematin formation is a unique process adopted by Plasmodium sp. to detoxify free heme and represents a validated target to design new effective antimalarials. Most of the β-hematin inhibitors are mainly based on 4-aminoquinolines, but the parasite has developed diverse defense mechanisms against this type of chemical system. Thus, the identification of other molecular chemical entities targeting the β-hematin formation pathway is highly needed to evade resistance mechanisms associated with 4-aminoquinolines. Herein, we showed that the highly coordinative character can be a useful tool for the rational design of antimalarial agents targeting β-hematin crystallization. From a small library consisting of five compound families with recognized antitrypanosomatid activity and coordinative abilities, a group of tetradentate 1,4-disubstituted phthalazin-aryl/heteroarylhydrazinyl derivatives were identified as potential antimalarials. They showed a remarkable curative response against Plasmodium berghei-infected mice with a significant reduction of the parasitemia, which was well correlated with their good inhibitory activities on β-hematin crystallization (IC50 = 5-7 μM). Their in vitro inhibitory and in vivo responses were comparable to those found for a chloroquine reference. The active compounds showed moderate in vitro toxicity against peritoneal macrophages, a low hemolysis response, and a good in silico ADME profile, identifying compound 2f as a promising antimalarial agent for further experiments. Other less coordinative fused heterocycles exhibited moderate inhibitory responses toward β-hematin crystallization and modest efficacy against the in vivo model. The complexation ability of the ligands with iron(III) was experimentally and theoretically determined, finding, in general, a good correlation between the complexation ability of the ligand and the inhibitory activity toward β-hematin crystallization. These findings open new perspectives toward the rational design of antimalarial β-hematin inhibitors based on the coordinative character as an alternative to the conventional β-hematin inhibitors.Entities:
Year: 2022 PMID: 35284702 PMCID: PMC8908514 DOI: 10.1021/acsomega.1c05393
Source DB: PubMed Journal: ACS Omega ISSN: 2470-1343
Figure 1Scheme for the dissociation of β-hematin by ligand interaction (A), complexation modes of phthalazine-hydrazones (B, C), benzo[g]phthalazine functionalized with a nitrogen-rich chain (D), and N1-aryl-2-trifluoromethylbenzo[b]naphthyridin-4(1H)-ones (E).
Inhibitory Activity on Heme Crystallization (IHC) for the 1-Arylhydrazinyl-phthalazines (1a–1t) with Corresponding Log P Values
Red bold text indicates up-borderline Log P according to Lipinsky’s rule.
Inhibitory Activity on Heme Crystallization (IHC) for the 1,4-Arylhydrazinyl-phthalazines 2a–2h, 1,2,4-Triazolophthalazines 3a–3f, 2-Arylquinazolin-4(3H)ones 4a–4u, N1-Aryl-2-(trifluoromethyl)benzo[b][1,8] Naphthyridin-4(1H)-ones 5a–5l, and Chloroquine (CQ) with Corresponding Log P Values
Red bold text indicates up-borderline Log P according to Lipinsky’s rule.
Inhibitory Response against β-Hematin Crystallization (IHC), Toxicity against Murine Peritoneal Macrophages, Selectivity Index (S.I.), Hemolysis Activity, Antimalarial Response for the Infected Model of P. berghei, and Partition Coefficient (Log P) for the Most Prominent Inhibitors 1d, 1e, 1h, 2a, 2b, 2d, 2e, 2f, 2h, 3b, 3c, 5a, and 5ka
Results are expressed as the media ± standard deviation (SD).
IHC: inhibition heme crystallization, expressed as IC50, for the most active derivatives.
Relative toxicity was determined on murine peritoneal macrophages.
Selectivity index (S.I.) from IC50 of inhibition toward β-hematin and CC50 (S.I. = IC50/CC50).
Relative hemolysis percent response was determined on red blood cells at 100 mM. Further hemolysis response data at 1 and 10 mM drug compound concentrations are listed in Table S1.
In vivo % P: percentage of parasitemia (compound dosage for in vivo assay was 20 mg kg–1).
Post-infection days determined by using infected mice with P. berghei, n = 6 (number of treated mice).
Calculated from the SwissADME software website, ref (61). *P < 0.05 compared to the control-treated group. **P < 0.01 compared to the control-treated group.
Control negative [C(−)] represents the experiment in the absence of any compound or reference drug.
Positive control treated with chloroquine (CQ) (20 mg kg–1).
Figure 2Correlation between the inhibitory response toward β-hematin and survival days post infection (A) and parasitemia index (B) for the most active compounds.
In Silico Physicochemical, Pharmacokinetic, and Druglikeness Parameters of the Prominent Antimalarial Candidates 2d and 2f
| type of parameter | parameter | ||
|---|---|---|---|
| physicochemical properties | MW (g/mol) | 456.41 | 346.34 |
| no. of rotatable bonds | 8 | 6 | |
| no. of H-bond acceptors | 8 | 6 | |
| no. of H-bond donors | 2 | 2 | |
| molar refractivity | 132.14 | 99.03 | |
| TPSA (Å2) | 166.20 | 100.84 | |
| delipophilicity | Log | 1.49 | 1.56 |
| Log | 4.65 | 3.79 | |
| Log | 3.96 | 3.33 | |
| Log | 2.90 | 1.88 | |
| Log | –0.17 | 2.92 | |
| Consensus Log | 2.56 | 2.69 | |
| water solubility | Log | –5.55 | –4.55 |
| solubility | 2.82 μM (moderately soluble) | 28.3 μM (moderately soluble) | |
| Log | –7.87 | –5.60 | |
| solubility | 13.6 nM (poorly soluble) | 2.50 μM (moderately soluble) | |
| pharmakinetic properties | G.I. absorption | low | high |
| BBB permeant | no | no | |
| P-gp substrate | no | no | |
| CYP1A2 inhibitor | no | yes | |
| CYP2C19 inhibitor | yes | yes | |
| CYP2C9 inhibitor | yes | no | |
| CYP2D6 inhibitor | no | no | |
| CYP3A4 inhibitor | yes | no | |
| Log | –5.78 cm/s | –5.72 cm/s | |
| druglikeness | Lipinski | yes; 1 violation: NorO > 10 | yes; 0 violation |
| Ghose | no; 1 violation: MR > 130 | yes | |
| Veber | no; 1 violation: TPSA > 140 | yes | |
| Egan | no; 1 violation: TPSA > 132 | yes | |
| Muegge | no; 1 violation: TPSA > 150 | yes | |
| bioavailability score | 0.55 | 0.55 | |
| medicinal chemistry | PAINS | 0 alert | 0 alert |
| Brenk | 2 alerts: imine_1, nitro_group | 1 alert: imine_1 | |
| leadlikeness | no; 3 violations: MW > 350, Rotors > 7, XLOGP3 > 3.5 | no; 1 violation: XLOGP3 > 3.5 |
MW: molecular weight.
TPSA: topological polar surface area.
G.I.: gastrointestinal.
BBB: blood–brain barrier.
P-gp: P-glycoprotein.
PAINS: pan assay interference structure. The rest of in silico data can be found in Tables S1–S5 of the Supporting Information. Fundamental definition of each parameter can be found in ref (62).
Figure 3Structure of ligand–iron(III) complexes for the disubstituted phthalazin-hydrazones 2a–2f and monosubstituted phthalazin-hydrazones 1d and 1p.
Figure 4Structure of ligand–iron(III) complexes for the 3-aryl-6-(N′-methylpiperazine)-1,2,4-triazolophthalazines 3c and 3d and N1-aryl 2-trifluoromethyl-benzo[b]naphthyridin-4(1H)-one 5k.
Comparison between the Complexation Ability and TPSA Data of the Most Active Derivatives with Its Inhibitory Response toward β-Hematin Crystallization
Complexation energy between the ligand and iron(II) calculated from B3LYP/6.31G(d,p).
Complexation energy between the ligand and iron(III) calculated from B3LYP/6.31G(d,p).
TPSA (topological polar surface area) calculated from SwissADME.
IC50 for the inhibition heme crystallization. Red color, critical case; bold black text, highlighted results. N.D., not determined.
Figure 5Correlations between the inhibitory response toward β-hematin crystallization and the binding constant of the ligand–iron(III) complexation (A) and the TPSA of the ligand (B). Blue points remark the most promising compounds, red points indicate the less prominent correlation, and green points are taken as exceptions to the general correlations.