Literature DB >> 35284165

Versatile, do-it-yourself, low-cost spinning disk confocal microscope.

Aaron R Halpern1,2, Min Yen Lee1, Marco D Howard1, Marcus A Woodworth1, Philip R Nicovich3, Joshua C Vaughan1,4,5.   

Abstract

Confocal microscopy is an invaluable tool for 3D imaging of biological specimens, however, accessibility is often limited to core facilities due to the high cost of the hardware. We describe an inexpensive do-it-yourself (DIY) spinning disk confocal microscope (SDCM) module based on a commercially fabricated chromium photomask that can be added on to a laser-illuminated epifluorescence microscope. The SDCM achieves strong performance across a wide wavelength range (∼400-800 nm) as demonstrated through a series of biological imaging applications that include conventional microscopy (immunofluorescence, small-molecule stains, and fluorescence in situ hybridization) and super-resolution microscopy (single-molecule localization microscopy and expansion microscopy). This low-cost and simple DIY SDCM is well-documented and should help increase accessibility to confocal microscopy for researchers.
© 2022 Optical Society of America under the terms of the OSA Open Access Publishing Agreement.

Entities:  

Year:  2022        PMID: 35284165      PMCID: PMC8884209          DOI: 10.1364/BOE.442087

Source DB:  PubMed          Journal:  Biomed Opt Express        ISSN: 2156-7085            Impact factor:   3.732


  34 in total

1.  A standard for calibration and shading correction of a fluorescence microscope.

Authors:  M A Model; J K Burkhardt
Journal:  Cytometry       Date:  2001-08-01

2.  Influence of refractive-index mismatch in high-resolution three-dimensional confocal microscopy.

Authors:  Alberto Diaspro; Federico Federici; Mauro Robello
Journal:  Appl Opt       Date:  2002-02-01       Impact factor: 1.980

3.  Quantitative comparison of background rejection, signal-to-noise ratio, and resolution in confocal and full-field laser scanning microscopes.

Authors:  D R Sandison; D W Piston; R M Williams; W W Webb
Journal:  Appl Opt       Date:  1995-07-01       Impact factor: 1.980

4.  Point by Point: An Introductory Guide to Sample Preparation for Single-Molecule, Super-Resolution Fluorescence Microscopy.

Authors:  Aaron R Halpern; Marco D Howard; Joshua C Vaughan
Journal:  Curr Protoc Chem Biol       Date:  2015-06-01

5.  Intensity calibration and flat-field correction for fluorescence microscopes.

Authors:  Michael Model
Journal:  Curr Protoc Cytom       Date:  2014-04-01

6.  High-resolution imaging of synaptic structure with a simple confocal microscope.

Authors:  J W Lichtman; W J Sunderland; R S Wilkinson
Journal:  New Biol       Date:  1989-10

7.  BigStitcher: reconstructing high-resolution image datasets of cleared and expanded samples.

Authors:  David Hörl; Fabio Rojas Rusak; Friedrich Preusser; Paul Tillberg; Nadine Randel; Raghav K Chhetri; Albert Cardona; Philipp J Keller; Hartmann Harz; Heinrich Leonhardt; Mathias Treier; Stephan Preibisch
Journal:  Nat Methods       Date:  2019-08-05       Impact factor: 28.547

8.  ThunderSTORM: a comprehensive ImageJ plug-in for PALM and STORM data analysis and super-resolution imaging.

Authors:  Martin Ovesný; Pavel Křížek; Josef Borkovec; Zdeněk Svindrych; Guy M Hagen
Journal:  Bioinformatics       Date:  2014-04-25       Impact factor: 6.937

9.  Flat-Field Super-Resolution Localization Microscopy with a Low-Cost Refractive Beam-Shaping Element.

Authors:  Christopher J Rowlands; Florian Ströhl; Pedro P Vallejo Ramirez; Katharina M Scherer; Clemens F Kaminski
Journal:  Sci Rep       Date:  2018-04-04       Impact factor: 4.379

10.  Feature-rich covalent stains for super-resolution and cleared tissue fluorescence microscopy.

Authors:  Chenyi Mao; Min Yen Lee; Jing-Ru Jhan; Aaron R Halpern; Marcus A Woodworth; Adam K Glaser; Tyler J Chozinski; Leonard Shin; Jeffrey W Pippin; Stuart J Shankland; Jonathan T C Liu; Joshua C Vaughan
Journal:  Sci Adv       Date:  2020-05-27       Impact factor: 14.136

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  1 in total

Review 1.  Understanding immune signaling using advanced imaging techniques.

Authors:  Mario Brameshuber; Enrico Klotzsch; Aleks Ponjavic; Erdinc Sezgin
Journal:  Biochem Soc Trans       Date:  2022-04-29       Impact factor: 4.919

  1 in total

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