Literature DB >> 35284107

Identification of a glycolysis-related gene signature for predicting pancreatic cancer survival.

Jiachao Zhang1, Zhehao Liu1, Zhensheng Zhang1, Rong Tang1, Yongchao Zeng1, Pingping Chen1.   

Abstract

Background: Pancreatic cancer (PC) is one of the most common malignant tumors of the digestive tract. Its clinical symptoms are obscure and atypical. It is difficult to diagnose and treat. Tumor cells mainly obtain energy through glycolysis to promote their growth. Inhibiting glycolysis can inhibit proliferation and kill tumor cells.
Methods: Using bioinformatics method, we investigate the relationships between glycolysis-related genes and PC tumor samples' epidemiologic information comprehensively.
Results: Different expression levels of 27 genes were identified. Using bioinformatics methods, we plotted two subgroup curves based on glycolysis-related gene expression level. Potential predictive genes were screened and their prognostic values were analyzed. Survival among high-risk group and low risk group had significant difference. Receiver operating characteristic (ROC) curve analysis indicated that area under curve (AUC) of 10 genes was greater than 0.8. These genes could be used for clinical diagnosis and prediction for PC. Two potential predictors [Kinesin Family Member 20A (KIF20A) and MET Proto-Oncogene, Receptor Tyrosine Kinase (MET)] that met the independent predictive value were selected. In univariate analysis, we screened out 3 regulators MET, protein kinase CAMP-activated catalytic subunit alpha (PRKACA) and KIF20A. According to the 3 regulatory factors, the prognostic signals of PC were constructed, by which the samples with good prognosis and poor prognosis can be clearly distinguished independently of potential confounding factors. Conclusions: Our results indicate that for PC, glycolysis -related genes could be promising therapeutic targets or prognostic indicators. 2022 Journal of Gastrointestinal Oncology. All rights reserved.

Entities:  

Keywords:  The Cancer Genome Atlas (TCGA); bioinformatics; glycolysis; pancreatic cancer (PC); prognostic signature

Year:  2022        PMID: 35284107      PMCID: PMC8899750          DOI: 10.21037/jgo-22-17

Source DB:  PubMed          Journal:  J Gastrointest Oncol        ISSN: 2078-6891


  27 in total

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3.  Down-regulation of RAB6KIFL/KIF20A, a kinesin involved with membrane trafficking of discs large homologue 5, can attenuate growth of pancreatic cancer cell.

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Journal:  Cancer Res       Date:  2005-01-01       Impact factor: 12.701

4.  Tumor-Associated Macrophages Enhance Tumor Hypoxia and Aerobic Glycolysis.

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Review 5.  Targeting the c-MET signaling pathway for cancer therapy.

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7.  Cell Metabolomics Reveals Berberine-Inhibited Pancreatic Cancer Cell Viability and Metastasis by Regulating Citrate Metabolism.

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8.  Efficacy of Perioperative Chemotherapy for Resectable Pancreatic Adenocarcinoma: A Phase 2 Randomized Clinical Trial.

Authors:  Davendra P S Sohal; Mai Duong; Syed A Ahmad; Namita S Gandhi; M Shaalan Beg; Andrea Wang-Gillam; James L Wade; E Gabriela Chiorean; Katherine A Guthrie; Andrew M Lowy; Philip A Philip; Howard S Hochster
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Review 9.  Targeting MET in cancer therapy.

Authors:  Hong-Nan Mo; Peng Liu
Journal:  Chronic Dis Transl Med       Date:  2017-07-19

10.  Precision Lasso: accounting for correlations and linear dependencies in high-dimensional genomic data.

Authors:  Haohan Wang; Benjamin J Lengerich; Bryon Aragam; Eric P Xing
Journal:  Bioinformatics       Date:  2019-04-01       Impact factor: 6.937

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1.  Comprehensive Analysis of Necroptosis in Pancreatic Cancer for Appealing its Implications in Prognosis, Immunotherapy, and Chemotherapy Responses.

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Journal:  Front Pharmacol       Date:  2022-05-18       Impact factor: 5.988

2.  Identification of a lncRNA based signature for pancreatic cancer survival to predict immune landscape and potential therapeutic drugs.

Authors:  Di Ma; Yuchen Yang; Qiang Cai; Feng Ye; Xiaxing Deng; Baiyong Shen
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