Literature DB >> 35283374

Putative Novel Species of Genus Capnocytophaga, Capnocytophaga stomatis Bacteremia in a Patient with Multiple Myeloma after Direct Contact with a Cat.

Koh Shinohara1,2, Yasuhiro Tsuchido2,3, Michio Suzuki4, Kojiro Yamamoto5, Yasutaro Okuzawa6, Koichi Imaoka4, Tsunehiro Shimizu1.   

Abstract

Capnocytophaga species are among the typical zoonotic pathogens causing infections following direct contact with animals. Recently, a putative novel species of zoonotic Capnocytophaga, Capnocytophaga stomatis, was reported. We herein report the first case of bacteremia caused by C. stomatis. A woman in her 80s with multiple myeloma who was receiving bortezomib and dexamethasone therapy was admitted to our hospital with a 2-day history of a fever and right calf redness. She was often licked by her cat. On a blood culture, thin, Gram-negative rods were detected, which were identified as C. stomatis by whole-genome sequencing. The patient was successfully treated with ampicillin-sulbactam treatment. Our case highlights the pathogenic potential of the putative novel Capnocytophaga, C. stomatis, in immunocompromised hosts.

Entities:  

Keywords:  Capnocytophaga stomatis; bacteremia; cellulitis; multiple myeloma; whole genome sequencing

Mesh:

Year:  2022        PMID: 35283374      PMCID: PMC9381356          DOI: 10.2169/internalmedicine.7947-21

Source DB:  PubMed          Journal:  Intern Med        ISSN: 0918-2918            Impact factor:   1.282


Introduction

Capnocytophaga species are fermentative bacteria that appear as slender, Gram-negative bacilli and are divided into two distinct groups. Capnocytophaga ochracea, C. sputigena, C. haemolytica, C. granulosa, C. leadbetteri, C. gingivalis, and C. periodontitidis are among the groups associated with the human oral cavity, while C. canimorsus, C. canis, C. cynodegmi, and C. felis are zoonotic (1-3). Recently, Zangenah et al. reported a putative novel species of the genus Capnocytophaga, Capnocytophaga stomatis, using whole-genome sequencing (4). C. stomatis has been isolated in humans who developed wound infections following animal bites and is genetically similar to C. cynodegmi. However, clinical information concerning C. stomatis is lacking, and its pathogenic potential in humans is unclear. We herein report the first case of C. stomatis bacteremia, identified using whole-genome sequencing.

Case Report

A woman in her 80s presented to our hospital with a 2-day fever history and right calf redness. Two years earlier, she had been diagnosed with asymptomatic multiple myeloma. The patient had experienced worsening bilateral leg edema over the past six months. Furthermore, a urinalysis revealed proteinuria, consistent with nephrotic syndrome. A renal biopsy confirmed amyloid light-chain amyloidosis. Bortezomib and dexamethasone were administered four weeks before the presentation. The patient kept a cat in her house, which often licked and scratched her calves. In addition to bilateral leg edema, redness from the right ankle to the distal half of the calf was observed. Vital signs showed a low-grade fever (37.1°C) and mild tachycardia (96 beats per minute). A laboratory examination on admission revealed unremarkable findings concerning the white blood cell count (6,570 /μL) and serum C-reactive protein level (0.09 mg/dL). The results of laboratory tests are summarized in Table 1. Cellulitis was diagnosed, and cefazolin (1 g every 12 h) was administered. Although defervescence was observed on admission day 2, the local signs of cellulitis were not resolved. On admission day 4, Gram-negative rod-shaped bacteria were isolated from two sets of anaerobic blood culture obtained on admission. Cefazolin was replaced with intravenous ampicillin-sulbactam (3 g every 12 h) on admission day 5, after which the local signs of cellulitis improved. Follow-up blood cultures, which were obtained at admission days 10 and 15, were negative, and transthoracic echocardiography showed no evidence of infective endocarditis. The seven-day ampicillin-sulbactam treatment was followed by oral amoxicillin-clavulanic acid, and the patient was discharged on admission day 13.
Table 1.

Results of the Laboratory Examination on Admission.

VariablesReference range, adultVariablesReference range, adult
White blood cell count (/µL)6,5703,500-8,500Alkaline phosphatase (U/L)218110-350
Red blood cell count (×104/µL)339380-490Lactate dehydrogenase (U/L)391120-230
Hemoglobin (g/dL)11.811.5-15.0Creatinine (mg/dL)1.970.3-1.1
Hematocrit (%)34.134-45Blood urine nitrogen (mg/dL)48.58-21
Platelet count (×103/µL)8001,300-3,500Natrium (mEq/L)132135-147
Total protein (g/dL)4.86.7-8.3Potassium (mEq/L)5.33.3-4.8
Albumin (g/dL)1.83.9-4.9Chloride (mEq/L)10498-109
Total bilirubin (mg/dL)0.60.2-1.2Calcium (mg/dL)8.18.2-10.2
Aspartate aminotransferase (U/L)310-35C-reactive protein (mg/dL)0.090-0.3
Alanine aminotransferase (U/L)180-30
Results of the Laboratory Examination on Admission. However, she was readmitted on day 14 because of skin eruption and a fever caused by amoxicillin-clavulanic acid, and ceftriaxone was administered instead. The 14-day therapy after the initiation of ampicillin-sulbactam was completed, and no relapse was observed thereafter. The clinical course is shown in Fig. 1.
Figure 1.

The clinical course of this case. CEZ: cefazolin, ABPC/SBT: ampicillin/sulbactam, AMPC/CVA: amoxicillin/clavuate acid, CTRX: ceftoriaxone, WBC: white blood cell count, CRP: C-reactive protein, Cre: serum creatinine

The clinical course of this case. CEZ: cefazolin, ABPC/SBT: ampicillin/sulbactam, AMPC/CVA: amoxicillin/clavuate acid, CTRX: ceftoriaxone, WBC: white blood cell count, CRP: C-reactive protein, Cre: serum creatinine

Microbiology

The isolates recovered from blood cultures were identified as C. cynodegmi by matrix-associated laser desorption/ionization time of flight mass spectrometry (MALDI-TOF MS; Microflex LT Biotyper; Bruker Daltonics, Bremen, Germany). The identification score was 1.70. The isolate was further examined by a 16S rRNA gene sequence analysis. The 1,383-bp sequencing product was compared with sequences deposited in the EzTaxon database, which resulted in a 99.3% identity match with the C. cynodegmi strain (DSM 19736). The isolate was confirmed to be C. cynodegmi using species-specific polymerase chain reaction (PCR) methods (5). A whole-genome sequencing method was applied for further investigation. The average nucleotide identity (ANI), measured using the JSpecies Web Server (JSpeciesES, https://www.ribocon.com/jspeciesws.html) (6). The ANI represents the average nucleotide identity of all orthologous genes shared between any two genomes and offers robust resolution between strains of the same or closely related species. In general, an ANI value 95% is equivalent to DDH value 70%, which is regarded as the threshold for differentiation of the species. The ANI value between our isolate (HP26001) and the C. stomatis strain H2177 was 97.2%, whereas the values between our isolate and DSM 107251 (a type strain of C. felis) and between our isolate and ATCC 49044 (a type strain of C. cynodegmi) were 89.2% and 84.1%, respectively. A whole-genome-based phylogenetic analysis of the isolated genome was performed with the Type (Strain) Genome Server (https://tygs.dsmz.de) to confirm close phylogenetic relationships between our isolate and the H2177 strain (Fig. 2). These results suggested that our isolate and H2177 were genetically different from C. cynodegmi. The isolate did not exhibit hemolytic activity on sheep blood agar plates (Fig. 3). The isolates were also re-analyzed using MALDI-TOF MS 6 times, which generated a score between 1.47-1.68 for C. cynodegmi. An E-test strip (bioMérieux, Marcy-L'Etoile, France) and the disk diffusion test were used to determined antimicrobial susceptibility following incubation on sheep blood agar [Try/Soy Blood Agar (Sheep) No.2, Kyokuto Pharmaceutical Industrial, Tokyo, Japan] at 37°C in 5% CO2 for 48 h (Table 2) (7). Although there is no standard Capnocytophaga species susceptibility testing method, it appears resistant to gentamicin. When applying the Clinical and Laboratory Standards Institute (CLSI) clinical breakpoints for Enterobacterales (8), the zone diameters of beta lactams were regarded as susceptible; however, that of cefazolin (18 mm) was included in the resistant category (≤19 mm).
Figure 2.

Tree inferred with FastME 2.1.6.1 from GBDP distances calculated from whole-genome sequences of the “Canocytophaga stomatis” strain HP26001 and related species. The tree was rooted at the midpoint using Pasteurella multocida as an outgroup sequence. The branch lengths are scaled in terms of the GBDP distance formula d5.

Figure 3.

Colony morphology of the isolate on sheep blood agar, 48 h culture, 37 °C, 5% CO2 atmosphere.

Table 2.

The Results of Antibiotic Susceptibility Test of the Isolate.

Antimicrobial agentsDisk (mm)E-test
Penicillin G270.125
Amoxicillin/clavuate acid250.094
Cefazolin18-
Ceftriaxone340.032
Imipenem360.25
Gentamycin->256
Minocycline390.047
Ciprofloxacin230.75
Azithromycin28-
Clindamycin36-
Tree inferred with FastME 2.1.6.1 from GBDP distances calculated from whole-genome sequences of the “Canocytophaga stomatis” strain HP26001 and related species. The tree was rooted at the midpoint using Pasteurella multocida as an outgroup sequence. The branch lengths are scaled in terms of the GBDP distance formula d5. Colony morphology of the isolate on sheep blood agar, 48 h culture, 37 °C, 5% CO2 atmosphere. The Results of Antibiotic Susceptibility Test of the Isolate.

Discussion

C. stomatis is a putative novel species of zoonotic Capnocytophaga, described by Zangenah et al. (4). It was found to be pathogenic in humans when isolated from an infected wound caused by a dog bite. However, no severe disease cases, including bacteremia caused by C. stomatis, have been reported. Our case revealed the pathogenic potential of C. stomatis to cause severe infection in immunocompromised hosts. Most human infections with Capnocytophaga species are caused by C. canimorsus, and documented cases of bacteremia of non-carnimorsus Capnocytophaga are limited. To our knowledge, only two cases of C. cynodegmi (9,10) and four cases of C. canis (7,11-14) have been reported (Table 3). Most cases of non-canimorsus Capnocytophaga bacteremia occurred in immunocompromised patients, especially anatomical asplenic patients (7,10,13,14) or those with a splenic function reduction due to liver diseases (7,11-13). In our case, humoral immune deficiency due to multiple myeloma and nephrotic syndrome, combined with cellular immune deficiency due to steroid and bortezomib use, appeared to have caused bacteremia. In addition, all non-canimorsus Capnocytophaga bacteremia cases, including our case, were associated with direct contact with cats or dogs, not limited to bites (7,9-14). Physicians should carefully identify patient's animal exposure history when managing cases of skin and soft tissue infections.
Table 3.

Literature Review of the Cases with Non-canimorsus Zoonotic Capnocytophaga Species Bacteremia.

Case No. [Ref.]OrganismAgeSexUnderlying illnessAnimal exposureSource of isolationClinical manifestationOutcome
1 [9] C. cynodegmi 59MaleDiabetes mellitusDog biteBlood, BALF, sputum, pusCellulitis, sepsis, pneumonitisRecovered
2 [10] C. cynodegmi 72FemalePost-splenectomyDog biteBlood, CSFSeptic shock, meningitisDied
3 [11, 14] C. canis 49MaleChronic alcoholic consumptionCat scratchBloodSepsisRecovered
4 [7, 14] C.canis 67FemaleIdiopathic portal hypertension, post-splenectomyCat biteBloodSeptic shockRecovered
5 [12, 14] C. canis 82FemaleLiver cancerContact with dogBloodSepsis, multiple organ failureDied
6 [13] C. canis 70MaleAtrial fibrillation, chronic alcoholic consumption, post-splenectomyCat scratchBloodSeptic shockRecovered
This case C. stomatis 81FemaleMultiple myeloma, nephrotic syndromeContact with catBloodCellulitisRecovered

CSF: cerebrospinal fluid, BALF: bronchoalveolar lavage fluid

Literature Review of the Cases with Non-canimorsus Zoonotic Capnocytophaga Species Bacteremia. CSF: cerebrospinal fluid, BALF: bronchoalveolar lavage fluid Our isolate's MALDI-TOF MS log score was below the cut-off level of 1.7. Zangenah et al. reported the usefulness of MALDI-TOF analysis for C. canimorsus or C. cynodegmi identification (15); however, among the strains identified as C. cynodegmi, three C. stomatis and one C. canis strains were included, which generated log scores below 1.7 (4,15). Our isolate also exhibited log scores of 1.47-1.70. Based on these results, a MALDI-TOF analysis may contribute to identifying C. stomatis and C. cynodegmi. Zangenah et al. described the colony morphologies of C. stomatis on blood agar plates. The colonies of C. stomatis were reportedly flat, larger than those of C. cynodegmi, and formed transparent/greyish colonies similar to those of C. canimorsus, which were clearly distinct from those of other zoonotic Capnocytophaga sp. In addition, the isolates of C. stomatis exhibited beta hemolytic activity on blood agar. However, our isolate showed gliding motility and no beta hemolytic activity, suggesting that the colony morphologies and hemolytic activity of C. stomatis isolates are not uniform, and attention should be paid to the identification of Capnocytophaga species by phenotypic features. Suitable antimicrobial agents for C. stomatis have not yet been determined. Historically, zoonotic Capnocytophaga species, mainly C. canimorsus, have been broadly susceptible to most antimicrobial agents, and penicillin or penicillin/beta-lactamase inhibitor combination is recommended as first-line therapy. However, recent reports have revealed that some strains of Capnocytophaga species, mainly human Capnocytophaga species and zoonotic Capnocytophaga species, harbor beta-lactamases, such as OXA-347, and demonstrate resistance to penicillin, cephalosporins, and imipenem (16). Although our isolate appeared to be susceptible to other beta-lactams, the zone diameter of cefazolin (18 mm) is regarded as resistant when using the CLSI clinical breakpoints for Enterobacterales (8), and the clinical response to cefazolin in this case appeared partially ineffective. More clinical information and antimicrobial susceptibility data of zoonotic Capnocytphaga species are needed. Our case highlights the pathogenic potential of a putative novel Capnocytophaga, C. stomatis, in immunocompromised hosts. Since 16S rRNA sequencing and species-specific PCR cannot differentiate between C. cynodegmi and C. stomatis, molecular surveillance using whole-genome sequencing will help deepen our understanding of the clinical and epidemiological features of zoonotic Capnocytophaga infections. The authors state that they have no Conflict of Interest (COI).
  14 in total

1.  Sepsis and meningitis due to Capnocytophaga cynodegmi after splenectomy.

Authors:  Abbas A Khawari; James W Myers; Donald A Ferguson; Jonathan P Moorman
Journal:  Clin Infect Dis       Date:  2005-06-01       Impact factor: 9.079

2.  Capnocytophaga cynodegmi cellulitis, bacteremia, and pneumonitis in a diabetic man.

Authors:  P S Sarma; S Mohanty
Journal:  J Clin Microbiol       Date:  2001-05       Impact factor: 5.948

3.  Characterization of three strains of Capnocytophaga canis isolated from patients with sepsis.

Authors:  Michio Suzuki; Koichi Imaoka; Yumi Haga; Masahiro Mohri; Ayako Nogami; Yoshio Shimojima; Yoshimi Irie; Satoru Sugimura; Shigeru Morikawa
Journal:  Microbiol Immunol       Date:  2018-09       Impact factor: 1.955

4.  Septic shock caused by Capnocytophaga canis after a cat scratch.

Authors:  Viviane Donner; Marta Buzzi; Vladimir Lazarevic; Nadia Gaïa; Myriam Girard; Francesco Renzi; Gesuele Renzi; Abdessalam Cherkaoui; Jacques Schrenzel
Journal:  Eur J Clin Microbiol Infect Dis       Date:  2020-05-24       Impact factor: 3.267

5.  Prevalence of Capnocytophaga canimorsus and Capnocytophaga cynodegmi in dogs and cats determined by using a newly established species-specific PCR.

Authors:  Michio Suzuki; Masanobu Kimura; Koichi Imaoka; Akio Yamada
Journal:  Vet Microbiol       Date:  2010-01-18       Impact factor: 3.293

6.  Shock following a cat scratch.

Authors:  Umpei Yamamoto; Mutsumi Kunita; Masahiro Mohri
Journal:  BMJ Case Rep       Date:  2013-01-11

7.  Capnocytophaga felis sp. nov. isolated from the feline oral cavity.

Authors:  Michio Suzuki; Kaoru Umeda; Masanobu Kimura; Koichi Imaoka; Shigeru Morikawa; Ken Maeda
Journal:  Int J Syst Evol Microbiol       Date:  2020-05       Impact factor: 2.747

8.  Genomic analysis reveals the presence of a class D beta-lactamase with broad substrate specificity in animal bite associated Capnocytophaga species.

Authors:  S Zangenah; A F Andersson; V Özenci; P Bergman
Journal:  Eur J Clin Microbiol Infect Dis       Date:  2016-12-01       Impact factor: 3.267

9.  Whole genome sequencing identifies a novel species of the genus Capnocytophaga isolated from dog and cat bite wounds in humans.

Authors:  Salah Zangenah; Nasir Abbasi; Anders F Andersson; Peter Bergman
Journal:  Sci Rep       Date:  2016-03-07       Impact factor: 4.379

10.  JSpeciesWS: a web server for prokaryotic species circumscription based on pairwise genome comparison.

Authors:  Michael Richter; Ramon Rosselló-Móra; Frank Oliver Glöckner; Jörg Peplies
Journal:  Bioinformatics       Date:  2015-11-16       Impact factor: 6.937

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