Literature DB >> 3527745

The importance of individual nucleotides for the structure and function of rRNA molecules in E. coli. A mutagenesis study.

N Meier, H U Göringer, B Kleuvers, U Scheibe, J Eberle, C Szymkowiak, M Zacharias, R Wagner.   

Abstract

Methods of in vitro mutagenesis were employed to determine the importance of individual nucleotides within the ribosomal RNAs for the structure and function of E. coli ribosomes. A series of defined nucleotides in the genes for the 5 S and 16 S RNA were altered by transition and transversion mutations using either oligonucleotide-directed or bisulfite-catalyzed mutation procedures. Plasmids harbouring the mutated rRNA genes were expressed and the ribosomes containing such altered RNAs were investigated for impairments in RNA-protein interaction assembly and mRNA-coded tRNA binding.

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Year:  1986        PMID: 3527745     DOI: 10.1016/0014-5793(86)81392-8

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  12 in total

1.  Two crystal forms of helix II of Xenopus laevis 5S rRNA with a cytosine bulge.

Authors:  Y Xiong; M Sundaralingam
Journal:  RNA       Date:  2000-09       Impact factor: 4.942

2.  Structure of 5S rRNA within the Escherichia coli ribosome: iodine-induced cleavage patterns of phosphorothioate derivatives.

Authors:  O V Shpanchenko; O A Dontsova; A A Bogdanov; K H Nierhaus
Journal:  RNA       Date:  1998-09       Impact factor: 4.942

3.  The importance of base pairing in the penultimate stem of Escherichia coli 16S rRNA for ribosomal subunit association.

Authors:  M A Firpo; A E Dahlberg
Journal:  Nucleic Acids Res       Date:  1998-05-01       Impact factor: 16.971

4.  A difference in the importance of bulged nucleotides and their parent base pairs in the binding of transcription factor IIIA to Xenopus 5S RNA and 5S RNA genes.

Authors:  F Baudin; P J Romaniuk
Journal:  Nucleic Acids Res       Date:  1989-03-11       Impact factor: 16.971

5.  Physical studies of 5S RNA variants at position 66.

Authors:  P Zhang; P Popieniek; P B Moore
Journal:  Nucleic Acids Res       Date:  1989-11-11       Impact factor: 16.971

6.  Probing the conformational changes in 5.8S, 18S and 28S rRNA upon association of derived subunits into complete 80S ribosomes.

Authors:  L Holmberg; Y Melander; O Nygård
Journal:  Nucleic Acids Res       Date:  1994-07-25       Impact factor: 16.971

7.  Mutations within the decoding site of Escherichia coli 16S rRNA: growth rate impairment, lethality and intragenic suppression.

Authors:  C L Thomas; R J Gregory; G Winslow; A Muto; R A Zimmermann
Journal:  Nucleic Acids Res       Date:  1988-08-25       Impact factor: 16.971

8.  Purification, crystallization and preliminary crystallographic analysis of the 16S rRNA methyltransferase RsmI from Escherichia coli.

Authors:  Mohan Zhao; Li Wang; Heng Zhang; Yuhui Dong; Yong Gong; Linbo Zhang; Jian Wang
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2014-08-27       Impact factor: 1.056

9.  U20, a novel small nucleolar RNA, is encoded in an intron of the nucleolin gene in mammals.

Authors:  M Nicoloso; M Caizergues-Ferrer; B Michot; M C Azum; J P Bachellerie
Journal:  Mol Cell Biol       Date:  1994-09       Impact factor: 4.272

10.  Fine-tuning of the ribosomal decoding center by conserved methyl-modifications in the Escherichia coli 16S rRNA.

Authors:  Satoshi Kimura; Tsutomu Suzuki
Journal:  Nucleic Acids Res       Date:  2009-12-03       Impact factor: 16.971

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