| Literature DB >> 35274713 |
Khalil Choucair1, Bassam Ibrahim Mattar2, Quoc Van Truong2, Travis Koeneke2, Phu Van Truong2, Christopher Dakhil2, Michael W Cannon2, Seth Joel Page2, Jeremy Michael Deutsch2, Eric Carlson2, Dennis Frederic Moore2, Nassim H Nabbout2, K James Kallail1, Shaker R Dakhil2, Pavan S Reddy2.
Abstract
BACKGROUND: Liquid biopsy testing offers a significant potential in selecting signal-matched therapies for advanced solid malignancies. The feasibility of liquid biopsy testing in a community-based oncology practice, and its actual impact on selecting signal-matched therapies, and subsequent survival effects have not previously been reported. PATIENTS AND METHODS: A retrospective chart review was conducted on adult patients with advanced solid cancer tested with a liquid-biopsy assay between December 2018 and 2019, in a community oncology practice. The impact of testing on treatment assignment and survival was assessed at 1-year follow-up.Entities:
Keywords: biomarkers; liquid biopsy; neoplasm; precision oncology; survival benefit
Mesh:
Year: 2022 PMID: 35274713 PMCID: PMC8914479 DOI: 10.1093/oncolo/oyac007
Source DB: PubMed Journal: Oncologist ISSN: 1083-7159
Figure 1.Liquid biopsy results: 18 histological subtypes were tested by LBx assays (A). This revealed a total of 481 somatic alterations across all tested patients (B). Of the overall detected actionable mutations (457), alterations in TP53, PIK3CA, EGFR and KRAS genes were the most common (C).
Summary of post-testing therapy assignment based on liquid biopsy signal generation
| Matching Rate (n/N; %) | Matching Score (mean; range) | Reasons for not matching signal to therapy when actionable mutation is available (%) | |
|---|---|---|---|
| Overall matcha | 24/135 (17.8) | - | - 1st Line, non-targeted therapy available (72.6) |
| FDA-approved matched therapy | 16/32 (50.0) | 0.6 (0.33-2.0) | |
| FDA- off label matched therapy | 5/73 (6.9) | 0.8 (0.17-2.0) | |
| Signal-based clinical trial therapy | 3/30 (10.0) | - | |
| Unmatched | 111/135 (82.2) | - |
Includes candidates with actionable mutation (n=105), and without actionable mutation but signal based RCT opportunity (n=30).
Abbreviation: FDA, Food and Drug Administration.
Figure 2.Kaplan-Meier survival curves comparing (A) OS and (B) PFS between matched (blue line) and unmatched (red line) patients following liquid biopsy testing. OS, overall survival; PFS, progression-free survival; CI, confidence interval.
Summary of liquid biopsy testing results in 178 tested patients with potential signal-based therapeutic opportunities. FDA: Food and Drug Administration
| Positive Test (n/N; %) | Negative Test (n/N; %) | |
|---|---|---|
| Total tested patients: 178 | 140/178 (78.7) | 38/178 (21.3) |
| Actionable mutation | 105/140 (75.0) | - |
| |
| - |
| |
| - |
| Non-actionable mutation | 35/140 (25.0) | - |
| |
| - |
Comparison of baseline variables and survival outcomes for the matched vs. unmatched patients
| Parameters | Total (n=66) | Matched (n=22) | Unmatched (n=44) |
|
|---|---|---|---|---|
| Age at diagnosis (Mean; 95% CI) | 65.5 (62-69) | 65.6 (59.6-71.6) | 65 (60.8-69.2) |
|
| Gender, n (%) |
| |||
|
| 46 (69.7) | 16 (72.7) | 30 (68.2) | |
|
| 20 (30.3) | 6 (27.3) | 14 (31.8) | |
| KPS (%) at testing (Mean; 95% CI) | 83.9 (81.5-86.3) | 84 (79.9-88.1) | 84.1 (81.2-87) |
|
| Tumor Type (n;%) | ||||
|
| 46 (69.7) | 14 (63.6) | 32 (72.7) |
|
|
| 13 (19.7) | 6 (27.3) | 7 (15.9) |
|
|
| 7 (10.6) | 2 (9.1) | 5 (11.4) |
|
| Stage at testing (% ≥= III-B) | 65 (98.5) | 22 (100) | 43 (97.7) |
|
| Survival | ||||
|
| 13 (11.4-14.6) | 15 (13.5-16.5) | 13 (11.3-14.7) |
|
|
| 10 (8.4-11.6) | 12 (10.0-13.4) | 5.0 (3.4-6.6) |
|
Abbreviations: CI, confidence interval; KPS: Karnofsky Performance Scale; OS, overall survival; PFS, progression-free survival.