Literature DB >> 35273723

Immune infiltration and a ferroptosis-related gene signature for predicting the prognosis of patients with cholangiocarcinoma.

Zhijian Wang1, Xuenuo Chen2, Zheng Jiang1.   

Abstract

Cholangiocarcinoma (CHOL) is a digestive tract tumor with high malignancy and poor prognosis and is extremely challenging to treat. At present, induced cell death holds great promise in tumor therapy. Ferroptosis is a recently proposed pattern of programmed cell death, and numerous studies have shown that it is intimately involved in tumors. However, the roles of differentially expressed ferroptosis-related genes (DEFRGs) in CHOL have not been investigated. Our study was based on The Cancer Genome Atlas (TCGA) database, and DEFRGs were obtained to construct a prognostic riskScore model of CHOL by univariate and multivariate Cox regression analyses. Subsequently, the model was evaluated by nomogram construction, survival analysis, receiver operating characteristic (ROC) analysis, and exploration of the immune microenvironment. The mRNA and protein expression levels of each gene in the model were validated by the Gene Expression Omnibus (GEO) database, quantitative real-time PCR (qRT-PCR) and immunohistochemistry (IHC) staining. Our study found that the construction of a nomogram confirmed the predictive value of the model for overall survival (OS), and it was confirmed to have high diagnostic value by ROC analysis. Our experimental results were almost consistent with our bioinformatics results. In conclusion, we found that the prognostic model showed extremely high diagnostic and prognostic value and could predict the possibility of immunotherapy, thus providing a new direction for individualized treatment of patients with CHOL. AJTR
Copyright © 2022.

Entities:  

Keywords:  Ferroptosis; bioinformatics analysis; cholangiocarcinoma (CHOL); immune microenvironment; prognosis

Year:  2022        PMID: 35273723      PMCID: PMC8902578     

Source DB:  PubMed          Journal:  Am J Transl Res        ISSN: 1943-8141            Impact factor:   4.060


  51 in total

Review 1.  Pathogenesis of Cholangiocarcinoma.

Authors:  Pedro M Rodrigues; Paula Olaizola; Nuno A Paiva; Irene Olaizola; Alona Agirre-Lizaso; Ana Landa; Luis Bujanda; Maria J Perugorria; Jesus M Banales
Journal:  Annu Rev Pathol       Date:  2020-12-02       Impact factor: 23.472

2.  The head and neck cancer immune landscape and its immunotherapeutic implications.

Authors:  Rajarsi Mandal; Yasin Şenbabaoğlu; Alexis Desrichard; Jonathan J Havel; Martin G Dalin; Nadeem Riaz; Ken-Wing Lee; Ian Ganly; A Ari Hakimi; Timothy A Chan; Luc Gt Morris
Journal:  JCI Insight       Date:  2016-10-20

Review 3.  Iron and thiol redox signaling in cancer: An exquisite balance to escape ferroptosis.

Authors:  Shinya Toyokuni; Fumiya Ito; Kyoko Yamashita; Yasumasa Okazaki; Shinya Akatsuka
Journal:  Free Radic Biol Med       Date:  2017-04-19       Impact factor: 7.376

4.  Expert consensus document: Cholangiocarcinoma: current knowledge and future perspectives consensus statement from the European Network for the Study of Cholangiocarcinoma (ENS-CCA).

Authors:  Jesus M Banales; Vincenzo Cardinale; Guido Carpino; Marco Marzioni; Jesper B Andersen; Pietro Invernizzi; Guro E Lind; Trine Folseraas; Stuart J Forbes; Laura Fouassier; Andreas Geier; Diego F Calvisi; Joachim C Mertens; Michael Trauner; Antonio Benedetti; Luca Maroni; Javier Vaquero; Rocio I R Macias; Chiara Raggi; Maria J Perugorria; Eugenio Gaudio; Kirsten M Boberg; Jose J G Marin; Domenico Alvaro
Journal:  Nat Rev Gastroenterol Hepatol       Date:  2016-04-20       Impact factor: 46.802

5.  Adipocytes promote cholangiocarcinoma metastasis through fatty acid binding protein 4.

Authors:  Jihua Nie; Jingying Zhang; Lili Wang; Lunjie Lu; Qian Yuan; Fangmei An; Shuyu Zhang; Yang Jiao
Journal:  J Exp Clin Cancer Res       Date:  2017-12-13

6.  Ferroptosis involves in intestinal epithelial cell death in ulcerative colitis.

Authors:  Minyi Xu; Jin Tao; Yidong Yang; Siwei Tan; Huiling Liu; Jie Jiang; Fengping Zheng; Bin Wu
Journal:  Cell Death Dis       Date:  2020-02-03       Impact factor: 8.469

Review 7.  Iron Dysregulation in Human Cancer: Altered Metabolism, Biomarkers for Diagnosis, Prognosis, Monitoring and Rationale for Therapy.

Authors:  Pierre Lelièvre; Lucie Sancey; Jean-Luc Coll; Aurélien Deniaud; Benoit Busser
Journal:  Cancers (Basel)       Date:  2020-11-26       Impact factor: 6.639

8.  Systematic RNA interference reveals that oncogenic KRAS-driven cancers require TBK1.

Authors:  David A Barbie; Pablo Tamayo; Jesse S Boehm; So Young Kim; Susan E Moody; Ian F Dunn; Anna C Schinzel; Peter Sandy; Etienne Meylan; Claudia Scholl; Stefan Fröhling; Edmond M Chan; Martin L Sos; Kathrin Michel; Craig Mermel; Serena J Silver; Barbara A Weir; Jan H Reiling; Qing Sheng; Piyush B Gupta; Raymond C Wadlow; Hanh Le; Sebastian Hoersch; Ben S Wittner; Sridhar Ramaswamy; David M Livingston; David M Sabatini; Matthew Meyerson; Roman K Thomas; Eric S Lander; Jill P Mesirov; David E Root; D Gary Gilliland; Tyler Jacks; William C Hahn
Journal:  Nature       Date:  2009-10-21       Impact factor: 49.962

9.  Development and Validation of a Robust Ferroptosis-Related Prognostic Signature in Lung Adenocarcinoma.

Authors:  Anran Zhang; Jinpo Yang; Chao Ma; Feng Li; Huan Luo
Journal:  Front Cell Dev Biol       Date:  2021-06-24

10.  N-acetylcysteine targets 5 lipoxygenase-derived, toxic lipids and can synergize with prostaglandin E2 to inhibit ferroptosis and improve outcomes following hemorrhagic stroke in mice.

Authors:  Saravanan S Karuppagounder; Lauren Alin; Yingxin Chen; David Brand; Megan W Bourassa; Kristen Dietrich; Cassandra M Wilkinson; Colby A Nadeau; Amit Kumar; Steve Perry; John T Pinto; Victor Darley-Usmar; Stephanie Sanchez; Ginger L Milne; Domenico Pratico; Theodore R Holman; S Thomas Carmichael; Giovanni Coppola; Frederick Colbourne; Rajiv R Ratan
Journal:  Ann Neurol       Date:  2018-11-29       Impact factor: 10.422

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  1 in total

1.  A ferroptosis-related gene signature for overall survival prediction and immune infiltration in lung squamous cell carcinoma.

Authors:  Ti-Wei Miao; De-Qing Yang; Fang-Ying Chen; Qi Zhu; Xin Chen
Journal:  Biosci Rep       Date:  2022-08-31       Impact factor: 3.976

  1 in total

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