| Literature DB >> 35273211 |
Shan Gao1,2, Zan Zeng3, HaoNing Wang4, FangYuan Chen5, LiYa Huang6, XiaoLong Wang7,8.
Abstract
African horse sickness (AHS) is a devastating equine infectious disease. On 17 March 2020, it first appeared in Thailand and threatened all the South-East Asia equine industry security. Therefore, it is imperative to carry out risk warnings of the AHS in China. The maximum entropy algorithm was used to model AHS and Culicoides separately by using climate and non-climate variables. The least cost path (LCP) method was used to analyze the habitat connectivity of Culicoides with the reclassified land cover and altitude as cost factors. The models showed the mean area under the curve as 0.918 and 0.964 for AHS and Culicoides. The prediction result map shows that there is a high risk area in the southern part of China while the habitats of the Culicoides are connected to each other. Therefore, the risk of introducing AHS into China is high and control of the border area should be strengthened immediately.Entities:
Mesh:
Year: 2022 PMID: 35273211 PMCID: PMC8913660 DOI: 10.1038/s41598-022-07512-w
Source DB: PubMed Journal: Sci Rep ISSN: 2045-2322 Impact factor: 4.379
Figure 1Research area. The elevation depicted by the digital elevation model (DEM). DEM was obtained from USGS Earth Explorer (https://www.earthexplorer.usgs.gov); the boundary was obtained from Natural Earth (http://www.naturalearthdata.com/), which is a schematic line illustrating the relative position of each country and should not be re-used or misinterpreted for any political reason.
Data layer and source, raster/vector, value range/categories and specification of the unit of measurement/impact (proxy) included in the models.
| Source | Variable value range or categories (type) | factors included in the Culicoides models | factors included in the AHS models | |
|---|---|---|---|---|
| Climatea | CHELSA | Current 1979–2013/Forecast 2041–2060 | Y | Y |
| Monthly P | Ibid | 0 to 545 / 0 to 581 mm/month | Y | Y |
| Monthly mean T | Ibid | −17.5 to 29 / −15.5 to 31.3 °C | Y | Y |
| Monthly min T | Ibid | −25.3 to 25.2 / −23.4 to 27.7 °C | Y | Y |
| Monthly max T | Ibid | −11.9 to 32.6 ℃/ −9.3 to 34.9 °C | Y | Y |
| Bioclimatic (19) | Ibid | Supplementary data Table A1 | Y | Y |
| ASTER-GDEM b | ||||
| DEM | Ibid | −553 to 7845 m a.s.l | Y | Y |
| Population | WorldPop c | 0.3 to 3940.9 persons/km2 | Y | Y |
| Land cover/Vegetation | ESAd | Categorical | Y | Y |
| Spatial distribution for cattle | GWL3 | 0–344,862 individual/km2 | Y | N |
| Spatial distribution for sheep | GWL3 | 0–344,862 individual/km2 | Y | N |
| Spatial distribution for goats | GWL3 | 0–344,862 individual/km2 | Y | N |
| Spatial distribution for buffaloes | GWL3 | 0–344,862 individual/km2 | Y | N |
| Spatial distribution for horses | GWL3 | 0–344,862 individual/km2 | Y | Y |
| Spatial distribution for pigs | GWL3 | 0–344,862 individual/km2 | Y | N |
| Spatial distribution for chickens | GWL3 | 0–344,862 individual/km2 | Y | N |
| Spatial distribution for ducks | GWL3 | 0–344,862 individual/km2 | Y | N |
a T = temperature; P = precipitation. Source: http://chelsa-climate.org/.
b Source: http://www.gscloud.cn/.
c Source: https://www.worldpop.org/.
d Land cover: Cropland, Herbaceous, Tree, Shrubland, Grassland, Urban areas, Bare areas, Water bodies and Permanent snow and ice.
eSource: http://www.fao.org/livestock-systems/.
Figure 2AHS and Culicoides overlying high-risk areas and transboundary Least Cost Paths for Culicoides. This map was made in ArcGIS 10.6 using the resulting rasters produced by MaxEnt. Red circle means occurrence sites of Culicoides and green triangle means African horse sickness outbreaks in the research area.occurrence sites of Culicoide. The pink lines shows the LCPs between of Culicoides. The boundary was obtained from Natural Earth (http://www.naturalearthdata.com/), which is a schematic line illustrating the relative position of each country and should not be re-used or misinterpreted for any political reason.
Figure 3The response curves of Model I. The curves show the mean response (red) and the mean standard deviation (blue).
Estimates of contributions of important predictor variables to the model.
| Model I ( | Model II (AHS) | ||||
|---|---|---|---|---|---|
| Variable | Contribution % | Permutation importance | Variable | Contribution % | Permutation importance |
| Landcover | 55.8 | 23.9 | Bio7 | 54 | 60.6 |
| Population | 40.4 | 61.6 | Land cover | 26 | 10.9 |
| Bio16 | 3.8 | 14.6 | Prec12 | 20 | 28.5 |
Figure 4The response curves of Model II. The curves show the mean response (red) and the mean standard deviation (blue).