Literature DB >> 35269785

Molecular Interactions of Tannic Acid with Proteins Associated with SARS-CoV-2 Infectivity.

Mohamed Haddad1,2, Roger Gaudreault3, Gabriel Sasseville3, Phuong Trang Nguyen4, Hannah Wiebe5, Theo Van De Ven5, Steve Bourgault4, Normand Mousseau3, Charles Ramassamy1,2.   

Abstract

The overall impact of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) on our society is unprecedented. The identification of small natural ligands that could prevent the entry and/or replication of the coronavirus remains a pertinent approach to fight the coronavirus disease (COVID-19) pandemic. Previously, we showed that the phenolic compounds corilagin and 1,3,6-tri-O-galloyl-β-D-glucose (TGG) inhibit the interaction between the SARS-CoV-2 spike protein receptor binding domain (RBD) and angiotensin-converting enzyme 2 (ACE2), the SARS-CoV-2 target receptor on the cell membrane of the host organism. Building on these promising results, we now assess the effects of these phenolic ligands on two other crucial targets involved in SARS-CoV-2 cell entry and replication, respectively: transmembrane protease serine 2 (TMPRSS2) and 3-chymotrypsin like protease (3CLpro) inhibitors. Since corilagin, TGG, and tannic acid (TA) share many physicochemical and structural properties, we investigate the binding of TA to these targets. In this work, a combination of experimental methods (biochemical inhibition assays, surface plasmon resonance, and quartz crystal microbalance with dissipation monitoring) confirms the potential role of TA in the prevention of SARS-CoV-2 infectivity through the inhibition of extracellular RBD/ACE2 interactions and TMPRSS2 and 3CLpro activity. Moreover, molecular docking prediction followed by dynamic simulation and molecular mechanics Poisson-Boltzmann surface area (MMPBSA) free energy calculation also shows that TA binds to RBD, TMPRSS2, and 3CLpro with higher affinities than TGG and corilagin. Overall, these results suggest that naturally occurring TA is a promising candidate to prevent and inhibit the infectivity of SARS-CoV-2.

Entities:  

Keywords:  3CLpro; COVID-19; RBD; SARS-CoV-2; TMPRSS2; molecular dynamics; polyphenols

Mesh:

Substances:

Year:  2022        PMID: 35269785      PMCID: PMC8910432          DOI: 10.3390/ijms23052643

Source DB:  PubMed          Journal:  Int J Mol Sci        ISSN: 1422-0067            Impact factor:   5.923


  87 in total

1.  Development and testing of a general amber force field.

Authors:  Junmei Wang; Romain M Wolf; James W Caldwell; Peter A Kollman; David A Case
Journal:  J Comput Chem       Date:  2004-07-15       Impact factor: 3.376

2.  Tannic acid as a precipitating agent of human plasma proteins.

Authors:  Aline Ferreira Pinto; Jéssica Miranda do Nascimento; Renata Vitória da Silva Sobral; Elba Lúcia Cavalcanti de Amorim; Ricardo Oliveira Silva; Ana Cristina Lima Leite
Journal:  Eur J Pharm Sci       Date:  2019-07-29       Impact factor: 4.384

3.  Canonical dynamics: Equilibrium phase-space distributions.

Authors: 
Journal:  Phys Rev A Gen Phys       Date:  1985-03

Review 4.  Automated docking of flexible ligands: applications of AutoDock.

Authors:  D S Goodsell; G M Morris; A J Olson
Journal:  J Mol Recognit       Date:  1996 Jan-Feb       Impact factor: 2.137

5.  Tannic acid suppresses SARS-CoV-2 as a dual inhibitor of the viral main protease and the cellular TMPRSS2 protease.

Authors:  Shao-Chun Wang; Yeh Chen; Yu-Chuan Wang; Wei-Jan Wang; Chia-Shin Yang; Chia-Ling Tsai; Mei-Hui Hou; Hsiao-Fan Chen; Yi-Chun Shen; Mien-Chie Hung
Journal:  Am J Cancer Res       Date:  2020-12-01       Impact factor: 6.166

6.  Self-Assembly of Soft Cellulose Nanospheres into Colloidal Gel Layers with Enhanced Protein Adsorption Capability for Next-Generation Immunoassays.

Authors:  Katariina Solin; Marco Beaumont; Sabine Rosenfeldt; Hannes Orelma; Maryam Borghei; Markus Bacher; Martina Opietnik; Orlando J Rojas
Journal:  Small       Date:  2020-11-20       Impact factor: 15.153

7.  Interaction of small molecules with the SARS-CoV-2 main protease in silico and in vitro validation of potential lead compounds using an enzyme-linked immunosorbent assay.

Authors:  Eleni Pitsillou; Julia Liang; Chris Karagiannis; Katherine Ververis; Kevion K Darmawan; Ken Ng; Andrew Hung; Tom C Karagiannis
Journal:  Comput Biol Chem       Date:  2020-10-23       Impact factor: 2.877

8.  Identification of potential plant-based inhibitor against viral proteases of SARS-CoV-2 through molecular docking, MM-PBSA binding energy calculations and molecular dynamics simulation.

Authors:  Bhaskarjyoti Gogoi; Purvita Chowdhury; Nabajyoti Goswami; Neelutpal Gogoi; Tufan Naiya; Pankaj Chetia; Saurov Mahanta; Dipak Chetia; Bhaben Tanti; Probodh Borah; Pratap Jyoti Handique
Journal:  Mol Divers       Date:  2021-04-15       Impact factor: 3.364

Review 9.  Therapeutic Potential of Glycosyl Flavonoids as Anti-Coronaviral Agents.

Authors:  Patrícia I C Godinho; Raquel G Soengas; Vera L M Silva
Journal:  Pharmaceuticals (Basel)       Date:  2021-06-07

10.  Exploring the Binding Mechanism of PF-07321332 SARS-CoV-2 Protease Inhibitor through Molecular Dynamics and Binding Free Energy Simulations.

Authors:  Bilal Ahmad; Maria Batool; Qurat Ul Ain; Moon Suk Kim; Sangdun Choi
Journal:  Int J Mol Sci       Date:  2021-08-24       Impact factor: 5.923

View more
  3 in total

Review 1.  Natural tannins as anti-SARS-CoV-2 compounds.

Authors:  Shao-Chun Wang; I-Wen Chou; Mien-Chie Hung
Journal:  Int J Biol Sci       Date:  2022-07-11       Impact factor: 10.750

2.  Role of tannic acid against SARS-cov-2 cell entry by targeting the interface region between S-protein-RBD and human ACE2.

Authors:  Xi Chen; Ziyuan Wang; Jing Wang; Yifan Yao; Qian Wang; Jiahao Huang; Xianping Xiang; Yifan Zhou; Yintong Xue; Yan Li; Xiang Gao; Lijun Wang; Ming Chu; Yuedan Wang
Journal:  Front Pharmacol       Date:  2022-08-08       Impact factor: 5.988

3.  Corilagin: A Novel Antivirulence Strategy to Alleviate Streptococcus pneumoniae Infection by Diminishing Pneumolysin Oligomers.

Authors:  Qiushuang Sheng; Xiaoning Hou; Nan Wang; Minda Liu; Haoyu Zhu; Xuming Deng; Xiaoying Liang; Gefu Chi
Journal:  Molecules       Date:  2022-08-09       Impact factor: 4.927

  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.