| Literature DB >> 35267276 |
Clara Tramuta1, Lucia Decastelli1, Elisa Barcucci1, Francesco Ingravalle2, Sandra Fragassi1, Samantha Lupi1, Daniela Manila Bianchi1.
Abstract
Food safety laboratories rely on validated methods that detect hidden allergens in food to ensure the safety and health of allergic consumers. Here we present test results for the validation and accreditation of a real-time PCR assay for the detection of peanut traces in food products. The method was tested on five classes of food matrices: bakery and pastry products, meats, ready-to-eat and dairy products, and grains and milling products. Blank samples were spiked starting with the peanut samples (Arachis hypogaea) at a concentration of 1000 ppm. Serial dilutions were then prepared with the DNA extracted from the blank samples to a final concentration of 0.5 ppm. The limit of detection in grains and milling products, ready-to-eat, meats, bakery and pastry products was 0.5 ppm (range, Ct 27-34) and 2.5 ppm in dairy products (range, Ct 25-34). In order to determine the exclusivity parameter of the method, the ragù matrix was contaminated with Prunus dulcis (almonds), Glycine max (soy), Sinapis alba (mustard), Apium graveolens (celery), Allium cepa (onion), Pisum sativum (peas), Daucus carota (carrots), and Theobroma cacao (cocoa); no cross-reactions were observed. The method was rated satisfactory for sensitivity (98%), specificity (100%), robustness, and repeatability and it was fully validated and accredited.Entities:
Keywords: food allergen; peanut; real-time PCR; validation
Year: 2022 PMID: 35267276 PMCID: PMC8909111 DOI: 10.3390/foods11050643
Source DB: PubMed Journal: Foods ISSN: 2304-8158
Origin of ingredients for preparation of blank samples.
| Matrix | True Negative Food | Ingredient | Origin |
|---|---|---|---|
| Bakery and pastry products | Chocolate cookies | Corn flour | Field harvest |
| Egg | Farm shell egg | ||
| Oil | Commercial | ||
| Sugar | Commercial | ||
| Cocoa beans | Commercial, negative for peanuts after testing | ||
| Grains and milling products | Rice and barley flour | Rice in grains | Commercial, negative for peanuts after testing |
| Barley in grains | Commercial, negative for peanuts after testing | ||
| Ready-to-eat | Olivier salad | Egg | Farm shell egg |
| Oil | Commercial | ||
| Carrot | Family vegetable garden | ||
| Peas | Family vegetable garden | ||
| Dairy product | Yogurt | Milk | Bovine farm bulk milk tank |
| Lyophilized bacterial cultures | Commercial | ||
| Meats | Ragù | Beef | Muscle taken at slaughtering |
| Tomato | Family vegetable garden | ||
| Onion | Family vegetable garden | ||
| Carrot | Family vegetable garden |
Real-time PCR cycle threshold (Ct) for spiking food matrix to LOD.
| Extraction | Cookies | Ragù | Flour | Olivier Salad | Yogurt |
|---|---|---|---|---|---|
| 1 | 28.07 | 29.34 | 28.69 | 28.42 | 32.05 |
| 2 | 27.04 | 30.28 | 28.54 | 28.98 | 33.52 |
| 3 | 27.73 | 29.09 | 29.16 | 28.32 | 31.63 |
| 4 | 28.61 | Not detected | 30.29 | 30.83 | 30.04 |
| 5 | 31.27 | 31.24 | 29.37 | 32.36 | 31.27 |
| 6 | 28.07 | 39.62 | 29.48 | 27.26 | 25.9 |
| 7 | 27.71 | 28.38 | 29.27 | 27.58 | 31.24 |
| 8 | 28.27 | 29.08 | 28.81 | 28.16 | 31.49 |
| 9 | 28.04 | 32.04 | 28.54 | 27.62 | 32.38 |
| 10 | 28.36 | 28.46 | 28.7 | 29.63 | 32.36 |
| Mean | 28.32 | 29.73 | 29.09 | 28.92 | 31.19 |
| Sd | 1.12 | 1.24 | 0.55 | 1.61 | 2.07 |
| Median | 28.07 | 29.34 | 28.99 | 28.37 | 31.56 |
| Minimum | 27.04 | 28.38 | 28.54 | 27.26 | 25.90 |
| Maximum | 31.27 | 32.04 | 30.29 | 32.36 | 33.52 |
Real-time PCR cycle threshold (Ct) for spiking food matrix to 10XLOD.
| Extraction | Cookies | Ragù | Flour | Olivier Salad | Yogurt |
|---|---|---|---|---|---|
| 1 | 25.09 | 25.67 | 25.85 | 25.4 | 27.73 |
| 2 | 24.3 | 26.53 | 26.56 | 25.66 | 29.27 |
| 3 | 24.7 | 25.23 | 26.22 | 25.35 | 27.96 |
| 4 | 25.54 | 32.05 | 27.05 | 27.68 | 26.44 |
| 5 | 28.19 | 27.12 | 26.21 | 29.47 | 25.71 |
| 6 | 24.65 | 26.04 | 27.22 | 24.29 | 22.62 |
| 7 | 25.03 | 25.01 | 26.03 | 24.43 | 28.27 |
| 8 | 25.17 | 25.51 | 26 | 25.28 | 27.85 |
| 9 | 25.58 | 27.6 | 25.54 | 24.67 | 28.52 |
| 10 | 24.88 | 25.21 | 26.14 | 26.54 | 28.65 |
| Mean | 25.31 | 26.60 | 26.28 | 25.88 | 27.30 |
| Sd | 1.08 | 2.10 | 0.52 | 1.62 | 1.95 |
| Median | 25.06 | 25.86 | 26.18 | 25.38 | 27.91 |
| Minimum | 24.30 | 25.01 | 25.54 | 24.29 | 22.62 |
| Maximum | 28.19 | 32.05 | 27.22 | 29.47 | 29.27 |
Figure 1Standard curve of real-time PCR obtained by analyzing serial dilutions of DNA extracted (0.5, 5, 50, 500 ppm) from the ragù spiked samples (range, 0.5–500 ppm).
Pairwise comparisons with p-value (p) and significance level of the two-sample Wilcoxon (Mann–Whitney) rank-sum test.
| Pairwise Comparisons | LOD | 10XLOD | ||||
|---|---|---|---|---|---|---|
| Cookies | vs. | Olivier salad | 0.4055 | 0.4057 | ||
| Cookies | vs. | Flour | 0.0040 | ** | 0.0036 | ** |
| Cookies | vs. | Ragù | 0.0042 | ** | 0.0233 | * |
| Cookies | vs. | Yogurt | 0.0046 | ** | 0.0082 | ** |
| Olivier salad | vs. | Flour | 0.2263 | 0.0963 | ||
| Olivier salad | vs. | Ragù | 0.1025 | 0.3643 | ||
| Olivier salad | vs. | Yogurt | 0.0140 | * | 0.0412 | * |
| Flour | vs. | Ragù | 0.4140 | 0.4963 | ||
| Flour | vs. | Yogurt | 0.0032 | ** | 0.0343 | * |
| Ragù | vs. | Yogurt | 0.0199 | * | 0.0696 | |
* p < 0.05; ** p < 0.01.