Literature DB >> 35254497

Update on CD164 and LMX1A genes to strengthen their causative role in autosomal dominant hearing loss.

Dominika Oziębło1,2, Sang-Yeon Lee3,4, Marcin Ludwik Leja1,2, Byung Yoon Choi5,6, Monika Ołdak7, Anna Sarosiak1,2, Natalia Bałdyga1, Henryk Skarżyński8, Yehree Kim9, Jin Hee Han9, Hyo Soon Yoo3,9, Min Hyun Park10,4.   

Abstract

Novel hearing loss (HL) genes are constantly being discovered, and evidence from independent studies is essential to strengthen their position as causes of hereditary HL. To address this issue, we searched our genetic data of families with autosomal dominant HL (ADHL) who had been tested with high-throughput DNA sequencing methods. For CD164, only one pathogenic variant in one family has so far been reported. For LMX1A, just two previous studies have revealed its involvement in ADHL. In this study we found two families with the same pathogenic variant in CD164 and one family with a novel variant in LMX1A (c.686C>A; p.(Ala229Asp)) that impairs its transcriptional activity. Our data show recurrence of the same CD164 variant in two HL families of different geographic origin, which strongly suggests it is a mutational hotspot. We also provide further evidence for haploinsufficiency as the pathogenic mechanism underlying LMX1A-related ADHL.
© 2022. The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature.

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Year:  2022        PMID: 35254497     DOI: 10.1007/s00439-022-02443-y

Source DB:  PubMed          Journal:  Hum Genet        ISSN: 0340-6717            Impact factor:   4.132


  31 in total

1.  Identification of deleterious mutations within three human genomes.

Authors:  Sung Chun; Justin C Fay
Journal:  Genome Res       Date:  2009-07-14       Impact factor: 9.043

2.  Localization of the genes encoding two transcription factors, LMX1 and CDX3, regulating insulin gene expression to human chromosomes 1 and 13.

Authors:  M S German; J Wang; A A Fernald; R Espinosa; M M Le Beau; G I Bell
Journal:  Genomics       Date:  1994-11-15       Impact factor: 5.736

3.  REVEL: An Ensemble Method for Predicting the Pathogenicity of Rare Missense Variants.

Authors:  Nilah M Ioannidis; Joseph H Rothstein; Vikas Pejaver; Sumit Middha; Shannon K McDonnell; Saurabh Baheti; Anthony Musolf; Qing Li; Emily Holzinger; Danielle Karyadi; Lisa A Cannon-Albright; Craig C Teerlink; Janet L Stanford; William B Isaacs; Jianfeng Xu; Kathleen A Cooney; Ethan M Lange; Johanna Schleutker; John D Carpten; Isaac J Powell; Olivier Cussenot; Geraldine Cancel-Tassin; Graham G Giles; Robert J MacInnis; Christiane Maier; Chih-Lin Hsieh; Fredrik Wiklund; William J Catalona; William D Foulkes; Diptasri Mandal; Rosalind A Eeles; Zsofia Kote-Jarai; Carlos D Bustamante; Daniel J Schaid; Trevor Hastie; Elaine A Ostrander; Joan E Bailey-Wilson; Predrag Radivojac; Stephen N Thibodeau; Alice S Whittemore; Weiva Sieh
Journal:  Am J Hum Genet       Date:  2016-09-22       Impact factor: 11.025

4.  Discovery of MYH14 as an important and unique deafness gene causing prelingually severe autosomal dominant nonsyndromic hearing loss.

Authors:  Bong Jik Kim; Ah Reum Kim; Jin Hee Han; Chung Lee; Doo Yi Oh; Byung Yoon Choi
Journal:  J Gene Med       Date:  2017-04       Impact factor: 4.565

5.  DFNA8/12 caused by TECTA mutations is the most identified subtype of nonsyndromic autosomal dominant hearing loss.

Authors:  Michael S Hildebrand; Matías Morín; Nicole C Meyer; Fernando Mayo; Silvia Modamio-Hoybjor; Angeles Mencía; Leticia Olavarrieta; Carmelo Morales-Angulo; Carla J Nishimura; Heather Workman; Adam P DeLuca; Ignacio del Castillo; Kyle R Taylor; Bruce Tompkins; Corey W Goodman; Isabelle Schrauwen; Maarten Van Wesemael; K Lachlan; A Eliot Shearer; Terry A Braun; Patrick L M Huygen; Hannie Kremer; Guy Van Camp; Felipe Moreno; Thomas L Casavant; Richard J H Smith; Miguel A Moreno-Pelayo
Journal:  Hum Mutat       Date:  2011-06-07       Impact factor: 4.878

Review 6.  Genetics of Postlingual Sensorineural Hearing Loss.

Authors:  Shadi Ahmadmehrabi; Jason Brant; Douglas J Epstein; Michael J Ruckenstein; Daniel J Rader
Journal:  Laryngoscope       Date:  2020-04-03       Impact factor: 3.325

Review 7.  A contemporary review of AudioGene audioprofiling: a machine-based candidate gene prediction tool for autosomal dominant nonsyndromic hearing loss.

Authors:  Michael S Hildebrand; Adam P DeLuca; Kyle R Taylor; David P Hoskinson; In Ae Hur; Dylan Tack; Sarah J McMordie; Patrick L M Huygen; Thomas L Casavant; Richard J H Smith
Journal:  Laryngoscope       Date:  2009-11       Impact factor: 3.325

8.  Identification of entire LMX1B gene deletions in nail patella syndrome: evidence for haploinsufficiency as the main pathogenic mechanism underlying dominant inheritance in man.

Authors:  Ernie Mhf Bongers; Ilse J de Wijs; Carlo Marcelis; Lies H Hoefsloot; Nine Vam Knoers
Journal:  Eur J Hum Genet       Date:  2008-04-16       Impact factor: 4.246

Review 9.  Cell fate determination, neuronal maintenance and disease state: The emerging role of transcription factors Lmx1a and Lmx1b.

Authors:  Hélène Doucet-Beaupré; Siew-Lan Ang; Martin Lévesque
Journal:  FEBS Lett       Date:  2015-10-23       Impact factor: 4.124

10.  Identifying a high fraction of the human genome to be under selective constraint using GERP++.

Authors:  Eugene V Davydov; David L Goode; Marina Sirota; Gregory M Cooper; Arend Sidow; Serafim Batzoglou
Journal:  PLoS Comput Biol       Date:  2010-12-02       Impact factor: 4.475

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  1 in total

Review 1.  Molecular mechanisms governing development of the hindbrain choroid plexus and auditory projection: A validation of the seminal observations of Wilhelm His.

Authors:  Joel C Glover; Bernd Fritzsch
Journal:  IBRO Neurosci Rep       Date:  2022-10-03
  1 in total

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