Literature DB >> 35238638

Amino acid sensor conserved from bacteria to humans.

Vadim M Gumerov1,2, Ekaterina P Andrianova1,2, Miguel A Matilla3, Karen M Page4, Elizabet Monteagudo-Cascales3, Annette C Dolphin4, Tino Krell3, Igor B Zhulin1,2.   

Abstract

SignificanceAmino acids are the building blocks of life and important signaling molecules. Despite their common structure, no universal mechanism for amino acid recognition by cellular receptors is currently known. We discovered a simple motif, which binds amino acids in various receptor proteins from all major life-forms. In humans, this motif is found in subunits of calcium channels that are implicated in pain and neurodevelopmental disorders. Our findings suggest that γ-aminobutyric acid-derived drugs bind to the same motif in human proteins that binds natural ligands in bacterial receptors, thus enabling future improvement of important drugs.

Entities:  

Keywords:  evolution; gabapentin; ion channels; serine/threonine kinases; signal transduction

Mesh:

Substances:

Year:  2022        PMID: 35238638      PMCID: PMC8915833          DOI: 10.1073/pnas.2110415119

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  43 in total

1.  Structural basis for amino-acid recognition and transmembrane signalling by tandem Per-Arnt-Sim (tandem PAS) chemoreceptor sensory domains.

Authors:  Yu C Liu; Mayra A Machuca; Simone A Beckham; Menachem J Gunzburg; Anna Roujeinikova
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2015-09-30

2.  Paralogous chemoreceptors mediate chemotaxis towards protein amino acids and the non-protein amino acid gamma-aminobutyrate (GABA).

Authors:  Miriam Rico-Jiménez; Francisco Muñoz-Martínez; Cristina García-Fontana; Matilde Fernandez; Bertrand Morel; Alvaro Ortega; Juan Luis Ramos; Tino Krell
Journal:  Mol Microbiol       Date:  2013-05-22       Impact factor: 3.501

3.  Three-dimensional structures of the ligand-binding domain of the bacterial aspartate receptor with and without a ligand.

Authors:  M V Milburn; G G Privé; D L Milligan; W G Scott; J Yeh; J Jancarik; D E Koshland; S H Kim
Journal:  Science       Date:  1991-11-29       Impact factor: 47.728

4.  Mechanism of transmembrane signaling by sensor histidine kinases.

Authors:  Ivan Gushchin; Igor Melnikov; Vitaly Polovinkin; Andrii Ishchenko; Anastasia Yuzhakova; Pavel Buslaev; Gleb Bourenkov; Sergei Grudinin; Ekaterina Round; Taras Balandin; Valentin Borshchevskiy; Dieter Willbold; Gordon Leonard; Georg Büldt; Alexander Popov; Valentin Gordeliy
Journal:  Science       Date:  2017-05-18       Impact factor: 47.728

5.  MAFFT multiple sequence alignment software version 7: improvements in performance and usability.

Authors:  Kazutaka Katoh; Daron M Standley
Journal:  Mol Biol Evol       Date:  2013-01-16       Impact factor: 16.240

6.  Accelerated Profile HMM Searches.

Authors:  Sean R Eddy
Journal:  PLoS Comput Biol       Date:  2011-10-20       Impact factor: 4.475

7.  Identification of a Vibrio cholerae chemoreceptor that senses taurine and amino acids as attractants.

Authors:  So-ichiro Nishiyama; Yohei Takahashi; Kentaro Yamamoto; Daisuke Suzuki; Yasuaki Itoh; Kazumasa Sumita; Yumiko Uchida; Michio Homma; Katsumi Imada; Ikuro Kawagishi
Journal:  Sci Rep       Date:  2016-02-16       Impact factor: 4.379

Review 8.  Voltage-gated calcium channels and their auxiliary subunits: physiology and pathophysiology and pharmacology.

Authors:  Annette C Dolphin
Journal:  J Physiol       Date:  2016-07-05       Impact factor: 5.182

Review 9.  Mirogabalin: could it be the next generation gabapentin or pregabalin?

Authors:  Jae-Yeon Kim; Salahadin Abdi; Billy Huh; Kyung-Hoon Kim
Journal:  Korean J Pain       Date:  2021-01-01

10.  Structural insights into the activation of metabotropic glutamate receptors.

Authors:  Antoine Koehl; Hongli Hu; Dan Feng; Bingfa Sun; Yan Zhang; Michael J Robertson; Matthew Chu; Tong Sun Kobilka; Toon Laeremans; Jan Steyaert; Jeffrey Tarrasch; Somnath Dutta; Rasmus Fonseca; William I Weis; Jesper M Mathiesen; Georgios Skiniotis; Brian K Kobilka
Journal:  Nature       Date:  2019-01-23       Impact factor: 49.962

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  4 in total

1.  Signal binding at both modules of its dCache domain enables the McpA chemoreceptor of Bacillus velezensis to sense different ligands.

Authors:  Haichao Feng; Yu Lv; Tino Krell; Ruixin Fu; Yunpeng Liu; Zhihui Xu; Wenbin Du; Qirong Shen; Nan Zhang; Ruifu Zhang
Journal:  Proc Natl Acad Sci U S A       Date:  2022-07-13       Impact factor: 12.779

2.  Biallelic CACNA2D1 loss-of-function variants cause early-onset developmental epileptic encephalopathy.

Authors:  Shehrazade Dahimene; Leonie von Elsner; Tess Holling; Lauren S Mattas; Jess Pickard; Davor Lessel; Kjara S Pilch; Ivan Kadurin; Wendy S Pratt; Igor B Zhulin; Hongzheng Dai; Maja Hempel; Maura R Z Ruzhnikov; Kerstin Kutsche; Annette C Dolphin
Journal:  Brain       Date:  2022-08-27       Impact factor: 15.255

3.  ADAM17 Mediates Proteolytic Maturation of Voltage-Gated Calcium Channel Auxiliary α2δ Subunits, and Enables Calcium Current Enhancement.

Authors:  Ivan Kadurin; Shehrazade Dahimene; Karen M Page; Joseph I J Ellaway; Kanchan Chaggar; Linda Troeberg; Hideaki Nagase; Annette C Dolphin
Journal:  Function (Oxf)       Date:  2022-03-17

4.  Pseudomonas syringae pv. tomato infection of tomato plants is mediated by GABA and l-Pro chemoperception.

Authors:  Saray Santamaría-Hernando; Álvaro López-Maroto; Clara Galvez-Roldán; Martí Munar-Palmer; Elizabet Monteagudo-Cascales; José-Juan Rodríguez-Herva; Tino Krell; Emilia López-Solanilla
Journal:  Mol Plant Pathol       Date:  2022-06-10       Impact factor: 5.520

  4 in total

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