Vaibhav Khanna1, Roshan Singh1, Pieterjan Claes2, Minh Tho Nguyen3, André Fielicke4,5, Ewald Janssens2, Peter Lievens2, John E McGrady1. 1. Department of Chemistry, University of Oxford, South Parks Road, Oxford OX1 3QR, U.K. 2. Quantum Solid-State Physics, Department of Physics and Astronomy, KU Leuven, Celestijnenlaan 200 D, B-3001 Leuven, Belgium. 3. Institute for Computational Science and Technology (ICST), Quang Trung Software City, Ho Chi Minh City 53151, Vietnam. 4. Fritz-Haber-Institut der Max-Planck-Gesellschaft, Faradayweg 4-6, 14195 Berlin, Germany. 5. Institut für Optik und Atomare Physik, Technische Universität Berlin, Hardenbergstrasse 36, 10623, Berlin, Germany.
Abstract
A comparison of DFT-computed and measured infrared spectra reveals the ground state structures of a series of gas-phase silicon clusters containing a common Mn2 unit. Mn2Si12 and [Mn2Si13]+ are both axially symmetric, allowing for a clean separation of the vibrational modes into parallel (a1) and perpendicular (e1) components. Information about the Mn-Mn and Mn-Si bonding can be extracted by tracing the evolution of these modes as the cluster increases in size. In [Mn2Si13]+, where the antiprismatic core is capped on both hexagonal faces, a relatively simple spectrum emerges that reflects a pseudo-D6d geometry. In cases where the cluster is more polar, either because there is no capping atom in the lower face (Mn2Si12) or the capping atom is present but displaced off the principal axis (Mn2Si13), the spectra include additional features derived from vibrational modes that are forbidden in the parent antiprism.
A comparison of DFT-computed and measured infrared spectra reveals the ground state structures of a series of gas-phase silicon clusters containing a common Mn2 unit. Mn2Si12 and [Mn2Si13]+ are both axially symmetric, allowing for a clean separation of the vibrational modes into parallel (a1) and perpendicular (e1) components. Information about the Mn-Mn and Mn-Si bonding can be extracted by tracing the evolution of these modes as the cluster increases in size. In [Mn2Si13]+, where the antiprismatic core is capped on both hexagonal faces, a relatively simple spectrum emerges that reflects a pseudo-D6d geometry. In cases where the cluster is more polar, either because there is no capping atom in the lower face (Mn2Si12) or the capping atom is present but displaced off the principal axis (Mn2Si13), the spectra include additional features derived from vibrational modes that are forbidden in the parent antiprism.
Over
the past 2 decades, the spectroscopy and electronic structure
of endohedral clusters of silicon have been explored from both experimental
and computational perspectives, the ultimate goal being to understand
how the electronic properties of the metal impact on the cluster and vice versa.[1−3] Beyond the intrinsic interest in the nature of the
chemical bonds in these clusters, they can be viewed as minimal models
for transition metals impurities in bulk silicon, an issue of considerable
significance in the semiconductor industry. From the outset, this
family of clusters has challenged conventional models of chemical
bonding, and the emergence of Density Functional Theory (DFT) as a
viable means of exploring potential energy surfaces has provided a
platform for many studies that seek to link structure and spectroscopy
to composition. There is, however, still no clear consensus on what
the “best” functional is for clusters of this type,
and the choice is often motivated by the authors’ previous
success in related studies. The influence of Hartree–Fock exchange
(present in hybrid functionals such as the popular B3LYP) on the computed
energies of different spin states is well documented: larger proportions
of Hartree–Fock exchange tend to favor unpaired spin density
and hence higher multiplicities.[4] Less
well documented, but of particular relevance here, is the fact that
even when the multiplicity is fixed, functional choice can have a
substantial impact on the relative energies of different local minima,
particularly in cases where the nature of the chemical bonding differs
qualitatively between them. In the family of M@Si14 clusters
(where M is the encapsulated metal dopant), for example, the BLYP
functional (and its hybrid, B3LYP) tends to favor “open”
structures with three-connected vertices while the PBE functional
(and its hybrid, PBE0), in contrast, stabilizes deltahedral structures
with more highly connected vertices.[5] These
structural differences mark a transition between localized σ/π
bonding (similar to that in the carbon-based fullerenes) in the “open”
structures to multicenter delocalized bonding typical of the heavier
group 14 elements in the deltahedral alternatives. The balance between
these two paradigms appears to be particularly delicate in silicon
clusters, leading to extreme sensitivity of the relative energies
of the different isomers to the choice of functional.[1−3,5−13] Multiconfigurational self-consistent field (MC-SCF) techniques are
increasingly being used as an alternative to DFT in studies of these
clusters, but the balanced treatment of static and dynamic correlation
required to compute meaningful energies remains a challenge.[14−22]Given the inherent difficulties in calculating relative energies,
an alternative strategy is to compare computed spectroscopic fingerprints
for various candidate structures to a measured spectrum. This approach
has been used with some success in the context of vibrational,[23] photoelectron,[24−32] and X-ray absorption spectroscopies,[33] and it underpins much of our current understanding of these clusters.
In this contribution, we use DFT as a tool to interrogate the vibrational
signatures of a series of mass-selected manganese-doped silicon clusters,
Mn2Si10, Mn2Si12, and
Mn2Si13, along with cationic [Mn2Si13]+. The strong electron–electron
repulsions within the 3d orbitals of the first-row transition metals
are a particular challenge to DFT, and these are compounded in this
case by the presence of two Mn atoms and hence the possibility of
metal–metal bonding. As a result, studies of this general class
of clusters have only begun to emerge in the past few years.[34−45] Through careful comparison between experiment and theory across
the Mn2Si series, we can identify
the most plausible structural candidates that are consistent with
the available data. Moreover, by identifying common symmetry elements,
we can trace the evolution of vibrational modes through the series
and connect these observations to the underlying patterns of electronic
structure.
Methodology
Experimental Techniques
All spectroscopic
measurements
are performed in a molecular beam setup[46] coupled to a beamline of the Free Electron Laser for Infrared eXperiments
(FELIX) user facility.[47] The clusters are
produced in a dual-target dual-laser vaporization cluster source by
pulsed ablation of manganese and silicon plate targets.[48] Cluster–xenon complexes are formed by
condensation of the vaporized material in a short pulse of He gas
containing a fraction (2.5%) of isotopically enriched 129Xe and cooled in a thermalization channel attached to the source
(115 K). Resonant absorption of IR light heats the cluster–xenon
complexes through internal vibrational redistribution, which may result
in dissociation of the complex. Infrared multiple photon dissociation
(IR-MPD) spectra are constructed by recording the intensities of the
ionic complexes as a function of the FELIX frequency in the 230–560
cm–1 range using a time-of-flight mass spectrometer.
Neutral clusters are post-ionized, after excitation by the infrared
laser and before extraction into the mass spectrometer, using a weakly
focused beam of 7.87 eV photons from an F2 excimer laser.
Computational Techniques
All DFT calculations were
performed using the Amsterdam Density Functional (ADF) package, version
2020.103.[49] Slater-type basis sets of triple-ζ
and two polarization functions (TZ2P) were used on all atoms.[50] The number of fit functions were increased by
adding the subkey “FitType QZ4P” of the key BASIS, and
a fine grid was used for numerical integration (keyword “BECKEGRID
Quality good”). In previous studies on transition metal-doped
silicon clusters,[14,51] some of us have shown that the
hybrid B3P86 functional gives reasonable treatment of spin states,
relative energies and spectroscopic parameters. In the present work
on doubly Mn-doped Si clusters, we have carried out extensive preliminary
computations using both B3P86 and Perdew–Becke–Ernzerhof
(PBE)[52] functionals. B3P86 was implemented
as a LibXC functional with ADF (LibXC is a library of approximate
exchange-correlation functionals). After careful calibration (documented
in the text), we select the PBE functional which is used in all calculations,
unless stated otherwise. All calculations were performed using spin-unrestricted
DFT. The initial structures were obtained in two ways: by carrying
out literature surveys for reported structures of similar systems
(doubly doped silicon clusters) or obtained by adding a second metal
atom to previously outlined structures for singly doped silicon clusters.
The computed infrared spectra were generated with a Lorentzian line
shape of 5 cm–1 full width at half-maximum. The
calculated frequency values were not scaled.
Results and Discussion
IR-MPD
Spectroscopy of Mn2Si10, Mn2Si12, Mn2Si13, and [Mn2Si13]+
IR-MPD spectra of the
neutral cluster Mn2Si, x = 10, 12, and 13, and cationic [Mn2Si13]+ are collected in Figure . The spectra of Mn2Si12 and
[Mn2Si13]+ appear related in so much
as both have their most intense feature in the window between 250
and 320 cm–1 and less intense bands between 325
and 400 cm–1. The spectrum of Mn2Si13 also features intense absorptions in the 250–300
and 375–425 cm–1 windows, but the bands are
much less distinct. The striking similarities between the spectra
suggest that the clusters may share common structural features that
determine at least the gross features of the vibrational manifold.
The spectrum of Mn2Si12 is also conspicuously
similar to that reported previously for [Co2Si12]+,[53] although the relative
intensities of the bands in the low-frequency region (below 300 cm–1) are somewhat lower for the cobalt analogue. The
spectrum of Mn2Si10 stands out as being quite
different from any of the others: its most intense band is a broad
feature centered at ∼450 cm–1, with less
intense peaks at 260 and 310 cm–1. Again, these
features are mirrored in the published spectrum of [Co2Si10]+, where a pronounced double peak is centered
on ∼430 cm–1.[53] This data set is clearly rich in information, and in the following
sections, we use DFT to explore the potential energy surface and vibrational
properties of these clusters with the aim of establishing the extent
to which shared structural characteristics lead to similarities and
differences in the measured IR-MPD spectra.
Figure 1
IR-MPD spectra of (a)
Mn2Si10, (b) Mn2Si12,
(c) [Mn2Si13]+, and (d) Mn2Si13. The spectra were measured
by monitoring Xe loss from the corresponding Xe-tagged complexes.
The experimental data points (red crosses) are overlaid with a three-point
running average (black line).
IR-MPD spectra of (a)
Mn2Si10, (b) Mn2Si12,
(c) [Mn2Si13]+, and (d) Mn2Si13. The spectra were measured
by monitoring Xe loss from the corresponding Xe-tagged complexes.
The experimental data points (red crosses) are overlaid with a three-point
running average (black line).
Density Functional Theory
Ground-State Structure and Vibrational Spectrum
of Mn2Si12
Our survey of the potential
energy surface
of Mn2Si12 (using the PBE functional) reveals
two low-lying local minima with hexagonal antiprismatic geometries,
one a triplet identified as 12 and the other a quintet, 12 (Figure ). We have
also identified a hexagonal prismatic septet (12). All three isomers have one endohedral Mn and a
second one capping a hexagonal face, with either exact or approximate C6 point symmetry. The most
stable of these is 12, with
the quintet and septet lying 0.59 and 1.13 eV higher in energy, respectively.
The same hexagonal antiprismatic structure was identified as the equilibrium
structure of the 59/60-electron clusters [Mo2Si12] and .[26,54] Taken at face value,
these data appear to be quite definitive in identifying the 12 isomer as the one observed in the experiment,
but we have emphasized above the extreme sensitivity of computed total
energies to functional choice. Our choice of the gradient-corrected
PBE functional was based on its common usage in group-14 cluster chemistry,[3,5,39] but there is a substantial body
of work in the field that employs hybrid functionals such as B3LYP
or B3P86 rather than gradient-corrected alternatives.[8,23,46,51,55] To try to unravel the impact of different
choices of functional, we have recomputed the energies of the low-lying
states of Mn2Si12 using the gradient-corrected
functionals BLYP and BP86 and also the hybrids, PBE0, B3LYP, and B3P86.
In this way, we can separate the influence of the exchange/correlation
functional from the effects of Hartree–Fock exchange. The relative
energies of the three states, shown in Figure , reveal a complex picture, where the identity
of the ground state is indeed highly dependent on functional choice.
While PBE, BLYP, BP86, and B3P86 concur in identifying the 12 isomer as the ground state, PBE0 favors
the quintet, 12, and B3LYP predicts
the hexagonal prismatic septet, 12. The influence of Hartree–Fock exchange is immediately apparent:
it stabilizes the quintet relative to the triplet and the septet relative
to the quintet, the result being that the relative energies of the
three states are very close for all three hybrids. A second, more
subtle, feature is that the LYP correlation functional (in BLYP and
B3LYP) stabilizes the 12 isomer
by ∼0.5 eV relative to the other two, with the result that
this isomer emerges as the global minimum only for B3LYP. This is
precisely the trend identified previously in the family of M@Si14 clusters, where the BLYP functional (and its hybrid) tends
to favor “open” structures with three-connected vertices
(in this case the hexagonal prism) over those with more highly connected
vertices (in this case the hexagonal antiprism). The trends identified
in Figure are also
apparent in the work of Khanna and co-workers on Fe2Si12[39] and Liang et al. on [Cr2Ge12]−.[31] In the first of these, using the PBE functional, the hexagonal antiprismatic
architecture was clearly the most stable whereas in the second, performed
with B3P86, the hexagonal prism was identified as a very low-lying
transition state that could facilitate rapid rearrangement. Our conclusion
here is simply that the calculated total energies using any single
functional are a poor criterion on which to base an assignment of
the ground-state structure.
Figure 2
IR-MPD spectrum of the Mn2Si12·Xe complex
(intensity in arbitrary units), optimized structures and computed
IR spectra of the 12, 12, and 12 states of Mn2Si12, all calculated
with the PBE functional.
Figure 3
Functional dependence
of the relative energies of the low-lying
states (12, 12, 12)
of Mn2Si12. The 12 state (blue) is chosen as the point of reference for all
functionals.
IR-MPD spectrum of the Mn2Si12·Xe complex
(intensity in arbitrary units), optimized structures and computed
IR spectra of the 12, 12, and 12 states of Mn2Si12, all calculated
with the PBE functional.Functional dependence
of the relative energies of the low-lying
states (12, 12, 12)
of Mn2Si12. The 12 state (blue) is chosen as the point of reference for all
functionals.The computed IR spectrum of the 12 isomer (the blue spectrum in Figure ) appears to provide
a good match to the
experimental data. Prominent bands at 272 and 288 cm–1 (both with e1 symmetry) map on to the broad experimental
feature between 260 and 290 cm–1, while the a1-symmetric modes at 345 and 385 cm–1 are
consistent with features at ∼340 cm–1 and
∼380 cm–1, respectively. We show later that
the 345 cm–1 mode has significant Mn–Mn stretching
character and is a direct signature of the presence of the Mn–Mn
bond. Although less prominent, an a1-symmetric vibration
at 317 cm–1 also corresponds to a less intense experimental
feature around 320 cm–1. The 12 isomer shows very similar features, although
the splitting of the two low-frequency peaks is rather more pronounced.
The 12 alternative also has
prominent bands in the 250–300 cm–1 region,
but the spectrum is devoid of intense features above 350 cm–1, and it does not, therefore, offer an obvious assignment for the
peak observed around 380 cm–1 in the experimental
data. On this basis, it seems that the 12 isomer is the most plausible candidate for the experimentally
observed cluster. As a corollary to this observation, the PBE functional
(along with BP86 and BLYP) appears to identify the correct ground
state isomer while the B3LYP functional does not.The identification
of a triplet ground state in Mn2Si12 indicates
that the majority of the intrinsic magnetic moments
of the component Mn atoms are quenched. The role of the Si12 cage in quenching the moment of the endohedral metal has been explored
in detail by Khanna and co-workers in the context of CrSi12[10,56] and also by us in the context of isoelectronic [MnSi12]+:[15] in short, there
is very substantial covalence that delocalizes the electron density
onto the cage, favoring spin pairing. As a result, any residual spin
moment is localized strongly on the external Mn ion, which is only
partially coordinated by one Si6 hexagon. A spin density
plot for Mn2Si12 is shown in the Supporting
Information, Figure S1, and the projected
Mulliken spin densities (PBE functional) are +2.83 and −0.22
on the external and endohedral Mn centers, respectively, with a further
0.61 spin-β electrons localized on the Si12 cage.
The Mn–Mn separation of 2.23 Å in the 12 ground state is much shorter than those for
typical Mn–Mn single bonds (2.895 Å in Mn2(CO)10, for example[57]) and, while bond-length-bond-order
correlations are notoriously difficult to establish with certainty
when bridging ligands (such as Si12, here) are present,
such a short bond is certainly indicative of strong Mn–Mn bonding.
The frontier Kohn–Sham orbitals for the triplet ground state
in Figure (a) include
a doubly occupied Mn–Mn σ orbital, 5a1, and
also a doubly occupied degenerate Mn–Mn π* orbital, 6e1α, and hence a formal Mn=Mn double bond, qualitatively
similar to that in O2. Much like the calculated energies
of the various states, these computed Mulliken spin densities (and
also the values of ⟨S2⟩)
are extremely sensitive to functional choice, and the corresponding
values with the hybrid PBE0 (+4.24 and −2.73 on external and
endohedral Mn, respectively) indicate a much more extreme degree of
polarization. This striking functional dependence indicates substantial
static correlation that we will explore in a forthcoming study using
multi-configurational SCF techniques.
Figure 4
Frontier Kohn–Sham orbitals for
(a) the 12 state of Mn2Si12 and
(b) the 13(a) state of [Mn2Si13]+.
Frontier Kohn–Sham orbitals for
(a) the 12 state of Mn2Si12 and
(b) the 13(a) state of [Mn2Si13]+.
Ground-State Structure and Vibrational Spectrum
of [Mn2Si13]+
The optimized
geometries of
two low-lying states of [Mn2Si13]+ are collected in Figure , along with their computed vibrational fingerprints. The
energies reported in the figure relate to the PBE functional, which
we adopt, on the basis that it identified the equilibrium structure
of Mn2Si12 correctly. Our survey of the potential
energy surface identifies as the global minimum a C6-symmetric isomer, 13(a), derived, at least
conceptually, from the Mn2Si12 antiprism by
capping the remaining hexagonal face with a Si+ ion. The
axial symmetry again allows for a clean separation of the vibrational
peaks into parallel (a1) and perpendicular (e1) modes, and the two prominent peaks in the experimental spectrum
are readily assigned to the computed modes at 310/315 and 359 cm–1, all of which have e1 symmetry. The alternative
’prism-like’ isomer, 13(b), is 0.19 eV higher in energy
with the PBE functional, and the computed spectrum of the 13(b) isomer
offers a significantly worse match to experiment. For this reason,
we assign the ground state as 13(a). It is worth noting, however, that the 13(b) is
computed to be more stable than 13(a) for all other functionals tested (Figure S2), again underlining the pitfalls of
relying solely on computed relative energies to identify structure.
The spin density in the 13(a) ground state is again localized strongly
on the external Mn ion (+3.41) while the moment at the endohedral
metal remains largely quenched (+0.67). The presence of the additional
Si atom on the principal axis serves to weaken the Mn–Mn bond
compared to Mn2Si12, and the Mn–Mn σ*
orbital shown in Figure b is now singly occupied. As a result, the Mn–Mn bond length
is 2.35 Å, 0.12 Å longer than in Mn2Si12. Unlike the Mn2Si12 case, there is no obvious
signature of the Mn–Mn bonding in the vibrational spectrum:
all modes with significant Mn–Mn stretching character are found
at very low frequencies and with low intensities, and in fact the
only a1-symmetric mode with substantial intensity (at 419
cm–1) has dominant Mn–Si, rather than Mn–Mn,
character. The experimental spectrum above 400 cm–1 does not show well-defined peaks, but there is evidence for an increase
in intensity at ∼410 cm–1 that we assign
to this mode.
Figure 5
IR-MPD spectrum of [Mn2Si13]+·Xe
complex (intensity in arbitrary units), optimized structures and computed
IR spectra of the low-lying 13(a) and 13(b) isomers of [Mn2Si13]+ (PBE functional).
IR-MPD spectrum of [Mn2Si13]+·Xe
complex (intensity in arbitrary units), optimized structures and computed
IR spectra of the low-lying 13(a) and 13(b) isomers of [Mn2Si13]+ (PBE functional).
Symmetry Analysis and Comparison of Mn2Si12 and [Mn2Si13]+
The fact
that the computed ground states of Mn2Si12 and
[Mn2Si13]+ share a hexagonal antiprismatic
core with a common 6-fold rotation axis allows for a clean separation
between modes involving motion along the principal axis and perpendicular
to it. The uncapped hexagonal antiprism, [MnSi12]+, therefore represents a natural reference point for the following
discussion. The [MnSi12]+ cation has been the
subject of a number of studies in its own right, and the ground state
is in fact a hexagonal prism rather than the antiprism that we consider
here, which is located 0.46 eV higher in energy (PBE). The [MnSi12]+ anti-prism has open-shell singlet and triplet
states that lie within 0.01 eV: to avoid complications due to spin
contamination in the open-shell singlet, we use the triplet here.
The fact that the hexagonal anti-prism is not the ground state of
[MnSi12]+ is not critical here: its role is
simply to act as a reference point for the discussion of the capped
analogues that are known.The spectra (experimental and computed)
of Mn2Si12 and [Mn2Si13]+ are compared in Figure , alongside the computed spectrum of the antiprismatic
isomer of [MnSi12]+. Atomic displacements for
the significant vibrational modes are shown in Figure , where they are separated into parallel
(a1) and perpendicular (e1) subsets. Modes that
feature prominently in the experimental spectrum are enclosed in red
boxes. The spectrum of the [MnSi12]+ reference
shows many of the features noted above for Mn2Si12 and [Mn2Si13]+, most notably an
intense e1-symmetric vibration at 277 cm–1 that involves the motion of the endohedral Mn in the xy plane. There are two further modes of e1 symmetry that
carry significant intensity, at 190 and 364 cm–1, both involving canting of the two Si6 rings. Among the
parallel set, an intense b2-symmetric mode at 314 cm–1 involves motion of the Mn atom along the principal
axis, coupled to an out-of-phase contraction/expansion of the two
Si6 rings. Although not allowed in the infrared spectrum
of D6-symmetric [MnSi12]+, modes of a1 and e5 symmetry
are also shown in the figures because they correlate with a1 and e1 modes in C6 symmetry, and so become allowed when capping atoms are introduced
in Mn2Si12 and [Mn2Si13]+. Among these, the two a1-symmetric modes
are breathing modes of the Si12 cage, either in the xy plane (300 cm–1) or along the principal
axis (386 cm–1). The e5 modes involve
either canting of the rings (200 cm–1) or deformation
of the individual Si6 rings (295 cm–1).
Figure 6
Evolution of the vibrational spectra of [MnSi12]+, Mn2Si12, and [Mn2Si13]+.
Figure 7
Evolution of the parallel and perpendicular
vibrational modes in
the series [MnSi12]+, Mn2Si12, and [Mn2Si13]+. Modes that feature
prominently in the spectra are enclosed in red boxes.
Evolution of the vibrational spectra of [MnSi12]+, Mn2Si12, and [Mn2Si13]+.Evolution of the parallel and perpendicular
vibrational modes in
the series [MnSi12]+, Mn2Si12, and [Mn2Si13]+. Modes that feature
prominently in the spectra are enclosed in red boxes.The intense 277 cm–1 perpendicular mode
in [MnSi12]+ can be tracked through the 288
cm–1 mode in Mn2Si12 and then
to the 310 cm–1 mode in [Mn2Si13]+, all of which are dominated by motion of the Mn atom
in the xy plane. Similarly, the characteristic canting
of the rings
in the 364 cm–1 mode in [MnSi12]+ is also found in the 364 cm–1 mode of Mn2Si12 and also the 359 cm–1 mode
of [Mn2Si13]+. The most striking
feature of the spectrum of Mn2Si12 is the appearance
of an additional e1-symmetric mode with high intensity,
at 272 cm–1, which is responsible for the striking
broadening in the experimental spectrum in the 250–300 cm–1 window. The displacements in this mode show that
it is derived from a linear combination of the e1 and e5-symmetric modes of [MnSi12]+ at 190 and 295 cm–1, respectively, both
of which transform as e1 in C6 symmetry. The “e5” character
is apparent in the lower Si6 ring while the “e1” character is localized in the upper ring. The significant
intensity of this mode (the most intense peak in the computed spectrum)
is a direct consequence of the presence of the capping Mn atom: without
it, the intensity drops to zero. We can follow the same displacements
through to the 268 cm–1 mode of [Mn2Si13]+, which has much lower intensity and is barely
discernible above the baseline in the experiment. The reduction in
intensity compared to Mn2Si12 signals a return
to a more symmetric, “pseudo-D6” environment for the cage,
where both Si6 faces are capped: the intensity would tend
to zero in the limit that the Mn and Si caps were electronically identical.A similar pattern of behavior can be identified in the parallel
modes. The intense b2-symmetric peak at 314 cm–1 in [MnSi12]+ can be tracked into the 345 cm–1 mode of Mn2Si12, and from there
to the antisymmetric Si–Mn–Mn stretch at 419 cm–1 in [Mn2Si13]+. The
corresponding symmetric stretch at 286 cm–1 is much
less intense, but a small feature in this region just discernible
above the baseline in the experimental spectrum. The second prominent
band of a1 symmetry in the spectrum of Mn2Si12, at 385 cm–1, is closely related to the
axial symmetric breathing of [MnSi12]+ at 386
cm–1 which was strictly forbidden in D6 symmetry. This mode therefore owes
its intensity entirely to the polar environment created by the capping
Mn atom, and it vanishes again when the counterbalancing Si cap is
introduced in [Mn2Si13]+ (373 cm–1). The forbidden a1-symmetric equatorial
breathing mode of [MnSi12]+ at 300 cm–1 also “lights up” in the presence of the capping Mn
atom of Mn2Si12, in the 317 cm–1 mode that appears as a weak feature in the experimental spectrum.
The corresponding 319 cm–1 mode in [Mn2Si13]+ is reduced in intensity, again signaling
a return to a pseudo-D6 symmetric environment.When considered against
the reference point of the rigorously D6-symmetric [MnSi12]+ antiprism,
it becomes clear that we can understand
the spectra of Mn2Si12 and [Mn2Si13]+ in terms of the extent to which the antiprismatic
MnSi12 core deviates from the high-symmetry D6 limit. The intense, allowed, bands
involving motion of the endohedral Mn atom in the xy plane are apparent in both spectra (288 and 364 cm–1 in Mn2Si12; 310 and 359 cm–1 in [Mn2Si13]+) while the parallel
motion of the endohedral Mn atom in [MnSi12]+ (314 cm–1) shifts into an Mn–Mn stretch
at 345 cm–1 in Mn2Si12 and
an antisymmetric Si–Mn–Mn stretch at 419 cm–1 in [Mn2Si13]+. The spectrum of
Mn2Si12 contains additional features because
the polar environment allows bands that are formally forbidden in D6 symmetry to acquire significant
intensity. Thus, we see new features at 272 cm–1 (e1), 317 and 385 cm–1 (both a1) that can be traced to modes that are formally forbidden
at the high-symmetry limit. All three of these extra bands are discernible
in the experimental spectrum. The fact that these additional features
disappear in the spectrum of [Mn2Si13]+ reflects the rather similar electronic effects of the capping Mn
and Si atoms, which restore approximate D6 symmetry to the antiprismatic MnSi12 core.
The more complex spectrum of Mn2Si12 compared
to that of [Mn2Si13]+ is, therefore,
a clear indication of the more polar, less symmetric, structure of
the former.
Vibrational Spectrum of Mn2Si13
The IR-MPD spectrum of Mn2Si13 has a lower
signal-to-noise ratio than those reported above, but nevertheless
we can identify similar features, notably a region of high intensity
in the 275–300 cm–1 region and another between
375 and 425 cm–1. The very broad peaks are immediately
indicative of a lower symmetry structure, and indeed, we find that
while the lowest energy structure, 13(a), has the same bicapped hexagonal antiprismatic structure
as the corresponding cation, the capping Si atom has moved off the
principal axis (Mn–Mn–Si = 159.5°) to give an approximately C-symmetric structure (Figure ). The C6-symmetric structure (13(b) in Figure ) has multiple imaginary frequencies which stem from
an orbitally degenerate ground state. The reduction in symmetry splits
all of the degenerate perpendicular vibrations into distinct a′
and a″ components, and also amplifies the difference between
the upper and lower Si6 hexagonal faces. The result is
a return to a spectrum typical of Mn2Si12, where
the modes involving motion of the endohedral Mn are complemented by
additional features that would be forbidden in the antiprism itself.
The additional (and, as in Mn2Si12, more intense)
bands are exemplified by the a″ mode at 315 cm–1, the analogue of the 272 cm–1 mode in Mn2Si12, and the a′ mode at 373 cm–1, the analogue of the 385 cm–1 breathing mode in
Mn2Si12. The 388 cm–1 mode
contains a large contribution from the asymmetric Mn–Mn–Si
stretch seen at 419 cm–1 in the cation, the lower
frequency reflecting the displacement of the capping Si off the principal
axis. The striking similarities between the spectra of Mn2Si13 and Mn2Si12 therefore reflect
a common polar structure where the upper and lower hexagonal faces
are sharply differentiated, compared to the rather simpler spectrum
of [Mn2Si13]+ where the antiprism
is more symmetrically capped.
Figure 8
IR-MPD spectrum of the Mn2Si13·Xe complex
(intensity in arbitrary units), optimized structures and computed
IR spectra of the low-lying isomers of Mn2Si13 (PBE functional). Vibrational modes corresponding to intense peaks
in the computed spectrum of 13(a) are also shown. Note that 13(b) is a second order saddle point, not a minimum.
IR-MPD spectrum of the Mn2Si13·Xe complex
(intensity in arbitrary units), optimized structures and computed
IR spectra of the low-lying isomers of Mn2Si13 (PBE functional). Vibrational modes corresponding to intense peaks
in the computed spectrum of 13(a) are also shown. Note that 13(b) is a second order saddle point, not a minimum.
Vibrational Spectrum of Mn2Si10
Finally,
we turn to the spectrum of Mn2Si10, which is
strikingly different from all others in so much as the
maximum intensity is found above 400 cm–1. The structures
of two low-lying isomers of Mn2Si10, 10 and 10, both with C symmetry, are compared in Figure . While the lower symmetry makes it harder to classify
the structures, it is clear that the connectivity of the Si vertices
in 10 is high (4 or 5) and in
that sense the structure resembles the hexagonal antiprism of Mn2Si12 (connectivity 4) rather more than the prism
(connectivity 3). Conversely, the 10 isomer bears closer resemblance to the prisms in the sense that
the Si vertices are 2, 3, or 4 connected, and indeed both the multiplicity
(7) and the Mn–Mn bond length (2.75 Å) resemble those
in the 12 structure of Mn2Si12. With the PBE functional, the 10 isomer is the more stable of the two, with
the 10 state 0.23 eV higher,
but the situation is reversed for the hybrids, PBE0 and B3LYP, where
the 10 isomer is the more stable
by 0.25 and 0.42 eV, respectively (see Supporting Information, Figure S4). We see precisely the same systematic
bias of the LYP correlation functional toward low-connectivity structures
that was identified for all other clusters considered in this paper.
Again, we conclude that the computed energies are highly functional
dependent, and they are therefore an unreliable metric upon which
to base any assignment of the ground state.
Figure 9
IR-MPD spectrum of the
Mn2Si10·Xe complex
(intensity in arbitrary units), optimized structures and computed
IR spectra of the low-lying isomers of Mn2Si10. Vibrational modes corresponding to intense peaks in the computed
spectrum of 10 are also shown
(PBE functional).
IR-MPD spectrum of the
Mn2Si10·Xe complex
(intensity in arbitrary units), optimized structures and computed
IR spectra of the low-lying isomers of Mn2Si10. Vibrational modes corresponding to intense peaks in the computed
spectrum of 10 are also shown
(PBE functional).The comparison between
the measured IR-MPD spectrum and the DFT-computed
fingerprints, also shown in Figure , indicates that the 10 isomer provides a good match to the experiment, with three
bands in the 425–475 cm–1 window, coincident
with the broad absorption feature observed in this region. We also
note here that the rather similar spectrum of [Co2Si10]+ was previously assigned to a structure almost
identical with 10, despite the
fact that it was computed (using the hybrid B3P86 functional) to be
less stable than the analogue of 10.[53] The absence of a 3-fold or higher
rotational axis again splits the modes involving motion perpendicular
to the principal axis into distinct a′ and a″ components,
and also mixes the parallel and perpendicular modes in a′ symmetry.
Nevertheless, we can identify the perpendicular motion of the Mn atom
in the a″ mode at 430 cm–1, while the other
two intense features at 448 and 462 cm–1 have mixed
parallel and perpendicular character. The major impact of the smaller
cage (Si10 vs Si12) is therefore to shift the
perpendicular modes to higher frequencies by ∼150 cm–1 where they mix with the parallel modes that are found in a similar
region in all of the spectra discussed previously.
Summary
and Conclusions
In this work we have measured the IR-MPD
spectra of a series of
silicon clusters containing a Mn2 unit, Mn2Si, with x = 10, 12, and 13,
and also the cation [Mn2Si13]+. By
comparison of these spectra to the DFT-computed fingerprints of various
candidate structures, we have been able to identify the isomers which
offer the best match to experiment. In all cases, these are based
on antiprismatic architectures, which are identified consistently
as the most stable only by the PBE functional. The B3LYP functional,
in contrast, shows a systematic bias toward alternative structures
with low-connectivity vertices (prisms rather than antiprisms).The ground-state structures of Mn2Si12 and
[Mn2Si13]+ are both axially symmetric,
which allows us to trace the evolution of the vibrational modes involving
motion parallel (a1) and perpendicular (e1)
to the principal axis. The isomeric D6-symmetric hexagonal antiprismatic [MnSi12]+ is a useful reference point in this regard because
the high symmetry leads to a relatively simple vibrational spectrum.
The major peaks in the spectrum of [Mn2Si13]+ have very similar character (in terms of atomic displacements)
to those in [MnSi12]+, reflecting the fact that
the capping Mn and Si atoms on opposite hexagonal Si6 faces
exert a rather similar electronic influence on the antiprism, giving
a pseudo-D6 environment. The vibrational spectrum of Mn2Si12, in contrast, shows a number of additional features that
can be traced to modes that are forbidden in D6 symmetry but acquire intensity in the polar C6 environment imposed by the
single capping Mn atom. In particular, the prominent peak around 380
cm–1 corresponds to the symmetric breathing mode
of the Si12 cage, and is the clearest manifestation of
the reduced symmetry. The neutral Mn2Si13 cluster
has a similar structure to the cation, except that the capping Si
atom has moved off the principal axis. The resulting loss of axial
symmetry splits the degenerate modes into two, and also amplifies
the difference between the upper and lower Si6 faces that
led to a more complex spectrum in Mn2Si12. It
is no coincidence, therefore, that the IR-MPD spectra of Mn2Si12 and Mn2Si13 are striking similar,
both showing high-intensity features that correspond to vibrations
that are forbidden in the parent antiprism. Our analysis shows that
these spectra are much more than mere fingerprints, and, when fully
assigned, they are rich in information about structure and also the
interplay between Mn–Mn, Mn–Si, and Si–Si bonding.