Literature DB >> 35237892

Incorporating Radiomics into Machine Learning Models to Predict Outcomes of Neuroblastoma.

Gengbo Liu1, Mini Poon2, Matthew A Zapala2, William C Temple3, Kieuhoa T Vo3, Kathrine K Matthay3, Debasis Mitra4,5, Youngho Seo6.   

Abstract

Neuroblastoma is one of the most common pediatric cancers. This study used machine learning (ML) to predict the mortality and a few other investigated intermediate outcomes of neuroblastoma patients non-invasively from CT images. Performances of multiple ML algorithms over retrospective CT images of 65 neuroblastoma patients are analyzed. An artificial neural network (ANN) is used on tumor radiomic features extracted from 3D CT images. A pre-trained 2D convolutional neural network (CNN) is used on slices of the same images. ML models are trained for various pathologically investigated outcomes of these patients. A subspecialty-trained pediatric radiologist independently reviewed the manually segmented primary tumors. Pyradiomics library is used to extract 105 radiomic features. Six ML algorithms are compared to predict the following outcomes: mortality, presence or absence of metastases, neuroblastoma differentiation, mitosis-karyorrhexis index (MKI), presence or absence of MYCN gene amplification, and presence of image-defined risk factors (IDRF). The prediction ranges over multiple experiments are measured using the area under the receiver operating characteristic (ROC-AUC) for comparison. Our results show that the radiomics-based ANN method slightly outperforms the other algorithms in predicting all outcomes except classification of the grade of neuroblastic differentiation, for which the elastic regression model performed the best. Contributions of the article are twofold: (1) noninvasive models for the prognosis from CT images of neuroblastoma, and (2) comparison of relevant ML models on this medical imaging problem.
© 2022. The Author(s) under exclusive licence to Society for Imaging Informatics in Medicine.

Entities:  

Keywords:  CT; Machine learning; Neural network; Neuroblastoma; Radiomics

Mesh:

Year:  2022        PMID: 35237892      PMCID: PMC9156639          DOI: 10.1007/s10278-022-00607-w

Source DB:  PubMed          Journal:  J Digit Imaging        ISSN: 0897-1889            Impact factor:   4.903


  3 in total

1.  Molecular and epidemiological characterization of carbapenemase-producing Enterobacteriaceae in Norway, 2007 to 2014.

Authors:  Ørjan Samuelsen; Søren Overballe-Petersen; Jørgen Vildershøj Bjørnholt; Sylvain Brisse; Michel Doumith; Neil Woodford; Katie L Hopkins; Bettina Aasnæs; Bjørg Haldorsen; Arnfinn Sundsfjord
Journal:  PLoS One       Date:  2017-11-15       Impact factor: 3.240

2.  A Comparison of WebRTC and Conventional Videoconferencing for Synchronized Remote Medical Image Presentation.

Authors:  Vishal Patel; Charles H Li; Van Rye; Chia-Shang J Liu; Alexander Lerner; Jay Acharya; Anandh G Rajamohan
Journal:  J Digit Imaging       Date:  2021-12-21       Impact factor: 4.056

3.  The Image Biomarker Standardization Initiative: Standardized Quantitative Radiomics for High-Throughput Image-based Phenotyping.

Authors:  Alex Zwanenburg; Martin Vallières; Mahmoud A Abdalah; Hugo J W L Aerts; Vincent Andrearczyk; Aditya Apte; Saeed Ashrafinia; Spyridon Bakas; Roelof J Beukinga; Ronald Boellaard; Marta Bogowicz; Luca Boldrini; Irène Buvat; Gary J R Cook; Christos Davatzikos; Adrien Depeursinge; Marie-Charlotte Desseroit; Nicola Dinapoli; Cuong Viet Dinh; Sebastian Echegaray; Issam El Naqa; Andriy Y Fedorov; Roberto Gatta; Robert J Gillies; Vicky Goh; Michael Götz; Matthias Guckenberger; Sung Min Ha; Mathieu Hatt; Fabian Isensee; Philippe Lambin; Stefan Leger; Ralph T H Leijenaar; Jacopo Lenkowicz; Fiona Lippert; Are Losnegård; Klaus H Maier-Hein; Olivier Morin; Henning Müller; Sandy Napel; Christophe Nioche; Fanny Orlhac; Sarthak Pati; Elisabeth A G Pfaehler; Arman Rahmim; Arvind U K Rao; Jonas Scherer; Muhammad Musib Siddique; Nanna M Sijtsema; Jairo Socarras Fernandez; Emiliano Spezi; Roel J H M Steenbakkers; Stephanie Tanadini-Lang; Daniela Thorwarth; Esther G C Troost; Taman Upadhaya; Vincenzo Valentini; Lisanne V van Dijk; Joost van Griethuysen; Floris H P van Velden; Philip Whybra; Christian Richter; Steffen Löck
Journal:  Radiology       Date:  2020-03-10       Impact factor: 29.146

  3 in total

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