Literature DB >> 35235662

Electron microscopy for imaging organelles in plants and algae.

Ethan Weiner1,2, Justine M Pinskey3, Daniela Nicastro3, Marisa S Otegui1,2.   

Abstract

Recent developments in both instrumentation and image analysis algorithms have allowed three-dimensional electron microscopy (3D-EM) to increase automated image collections through large tissue volumes using serial block-face scanning EM (SEM) and to achieve near-atomic resolution of macromolecular complexes using cryo-electron tomography (cryo-ET) and sub-tomogram averaging. In this review, we discuss applications of cryo-ET to cell biology research on plant and algal systems and the special opportunities they offer for understanding the organization of eukaryotic organelles with unprecedently resolution. However, one of the most challenging aspects for cryo-ET is sample preparation, especially for multicellular organisms. We also discuss correlative light and electron microscopy (CLEM) approaches that have been developed for ET at both room and cryogenic temperatures. © American Society of Plant Biologists 2021. All rights reserved. For permissions, please email: journals.permissions@oup.com.

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Year:  2022        PMID: 35235662      PMCID: PMC8825266          DOI: 10.1093/plphys/kiab449

Source DB:  PubMed          Journal:  Plant Physiol        ISSN: 0032-0889            Impact factor:   8.005


  141 in total

Review 1.  Cryo-electron microscopy of vitreous sections.

Authors:  Ashraf Al-Amoudi; Jiin-Ju Chang; Amélie Leforestier; Alasdair McDowall; Laurée Michel Salamin; Lars P O Norlén; Karsten Richter; Nathalie Sartori Blanc; Daniel Studer; Jacques Dubochet
Journal:  EMBO J       Date:  2004-08-19       Impact factor: 11.598

Review 2.  Challenges and opportunities in cryo-EM single-particle analysis.

Authors:  Dmitry Lyumkis
Journal:  J Biol Chem       Date:  2019-02-25       Impact factor: 5.157

3.  Multiscale Structural Analysis of Plant ER-PM Contact Sites.

Authors:  Heather E McFarlane; Eun Kyoung Lee; Laura S van Bezouwen; Bradford Ross; Abel Rosado; A Lacey Samuels
Journal:  Plant Cell Physiol       Date:  2017-03-01       Impact factor: 4.927

4.  ATG9 regulates autophagosome progression from the endoplasmic reticulum in Arabidopsis.

Authors:  Xiaohong Zhuang; Kin Pan Chung; Yong Cui; Weili Lin; Caiji Gao; Byung-Ho Kang; Liwen Jiang
Journal:  Proc Natl Acad Sci U S A       Date:  2017-01-04       Impact factor: 11.205

5.  ER-to-Golgi transport by COPII vesicles in Arabidopsis involves a ribosome-excluding scaffold that is transferred with the vesicles to the Golgi matrix.

Authors:  Byung-Ho Kang; L Andrew Staehelin
Journal:  Protoplasma       Date:  2008-09-20       Impact factor: 3.356

6.  Structural basis for VIPP1 oligomerization and maintenance of thylakoid membrane integrity.

Authors:  Tilak Kumar Gupta; Sven Klumpe; Karin Gries; Steffen Heinz; Wojciech Wietrzynski; Norikazu Ohnishi; Justus Niemeyer; Benjamin Spaniol; Miroslava Schaffer; Anna Rast; Matthias Ostermeier; Mike Strauss; Jürgen M Plitzko; Wolfgang Baumeister; Till Rudack; Wataru Sakamoto; Jörg Nickelsen; Jan M Schuller; Michael Schroda; Benjamin D Engel
Journal:  Cell       Date:  2021-06-23       Impact factor: 41.582

7.  Friendly mediates membrane depolarization-induced mitophagy in Arabidopsis.

Authors:  Juncai Ma; Zizhen Liang; Jierui Zhao; Pengfei Wang; Wenlong Ma; Keith K Mai; Juan A Fernandez Andrade; Yonglun Zeng; Nenad Grujic; Liwen Jiang; Yasin Dagdas; Byung-Ho Kang
Journal:  Curr Biol       Date:  2021-03-11       Impact factor: 10.834

8.  Native architecture of the Chlamydomonas chloroplast revealed by in situ cryo-electron tomography.

Authors:  Benjamin D Engel; Miroslava Schaffer; Luis Kuhn Cuellar; Elizabeth Villa; Jürgen M Plitzko; Wolfgang Baumeister
Journal:  Elife       Date:  2015-01-13       Impact factor: 8.140

9.  Proteomic Analysis of Lipid Droplets from Arabidopsis Aging Leaves Brings New Insight into Their Biogenesis and Functions.

Authors:  Lysiane Brocard; Françoise Immel; Denis Coulon; Nicolas Esnay; Karine Tuphile; Stéphanie Pascal; Stéphane Claverol; Laëtitia Fouillen; Jean-Jacques Bessoule; Claire Bréhélin
Journal:  Front Plant Sci       Date:  2017-05-29       Impact factor: 5.753

10.  Inner lumen proteins stabilize doublet microtubules in cilia and flagella.

Authors:  Mikito Owa; Takayuki Uchihashi; Haru-Aki Yanagisawa; Takashi Yamano; Hiro Iguchi; Hideya Fukuzawa; Ken-Ichi Wakabayashi; Toshio Ando; Masahide Kikkawa
Journal:  Nat Commun       Date:  2019-03-08       Impact factor: 14.919

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  1 in total

1.  Correlation of vacuole morphology with stomatal lineage development by whole-cell electron tomography.

Authors:  Wenhan Cao; Zhenping Li; Shuxian Huang; Yuwei Shi; Ying Zhu; Man Nga Lai; Pui Lok Lok; Xiangfeng Wang; Yong Cui; Liwen Jiang
Journal:  Plant Physiol       Date:  2022-03-28       Impact factor: 8.340

  1 in total

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