Literature DB >> 35230561

Genome-Wide Identification, Expression, and Interaction Analysis of BEL-Like Homeodomain Gene Family in Peach.

Hui-Feng Li1, Ya-Ting Wu2, Qiang Zhao3, Qing-Long Dong4.   

Abstract

BEL1-like homeodomain (BLH) family genes as homeodomain transcription factors are found ubiquitously in plants to play important regulatory roles in reproductive development, morphological development, and stress response. Although BLH proteins have been reported in some species, there is little information about BLH genes in peach. In this study, we identified 11 peach PpBLH genes based on the conserved domain. Phylogenetic analysis suggested that the PpBLH proteins could be divided into five groups, which might be involved in different aspects of morphogenesis. Genomics structure analysis revealed that there were four exons in the PpBLH gene, and the length of the third exon was 61 bp. Chromosomal location analysis showed that the PpBLH genes were not distributed uniformly on six chromosomes. Promoter analysis showed that the promoter sequences of six PpBLH genes contained multiple cis-acting elements for hormones and stress. Six PpBLH genes were cloned by RT-PCR, and PpBLH1, PpBLH4, and PpBLH7 showed different expression patterns in the tested fruits under common temperature and high temperature. Y2H results indicated that PpBLH7 andPpBLH10 interacted with the PpOFP6 protein, and PpBLH1 interacted with the PpOFP1, PpOFP2, PpOFP4, and PpOFP13 proteins. These results provide new insight for further study of PpBLH genes, and construction of regulatory networks of PpBLH proteins in the growth, development, and stress response of peach.
© 2022. The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature.

Entities:  

Keywords:  BEL-like homeodomain; Expression analysis; Gene cloning; Interaction analysis; Peach

Year:  2022        PMID: 35230561     DOI: 10.1007/s10528-022-10203-w

Source DB:  PubMed          Journal:  Biochem Genet        ISSN: 0006-2928            Impact factor:   1.890


  34 in total

1.  A central role of Arabidopsis thaliana ovate family proteins in networking and subcellular localization of 3-aa loop extension homeodomain proteins.

Authors:  Jana Hackbusch; Klaus Richter; Judith Müller; Francesco Salamini; Joachim F Uhrig
Journal:  Proc Natl Acad Sci U S A       Date:  2005-03-21       Impact factor: 11.205

2.  Homeodomain proteins belong to the ancestral molecular toolkit of eukaryotes.

Authors:  Romain Derelle; Philippe Lopez; Hervé Le Guyader; Michaël Manuel
Journal:  Evol Dev       Date:  2007 May-Jun       Impact factor: 1.930

3.  Structural and functional analyses of genes encoding VQ proteins in apple.

Authors:  Qinglong Dong; Shuang Zhao; Dingyue Duan; Yi Tian; Yanpeng Wang; Ke Mao; Zongshan Zhou; Fengwang Ma
Journal:  Plant Sci       Date:  2018-05-03       Impact factor: 4.729

4.  BELL1-like homeobox genes regulate inflorescence architecture and meristem maintenance in rice.

Authors:  Takuyuki Ikeda; Wakana Tanaka; Taiyo Toriba; Chie Suzuki; Akiteru Maeno; Katsutoshi Tsuda; Toshihiko Shiroishi; Tetsuya Kurata; Tomoaki Sakamoto; Masayuki Murai; Hiroaki Matsusaka; Toshihiro Kumamaru; Hiro-Yuki Hirano
Journal:  Plant J       Date:  2019-03-05       Impact factor: 6.417

5.  The transcription factors BEL1 and SPL are required for cytokinin and auxin signaling during ovule development in Arabidopsis.

Authors:  Stefano Bencivenga; Sara Simonini; Eva Benková; Lucia Colombo
Journal:  Plant Cell       Date:  2012-07-10       Impact factor: 11.277

6.  Genetic and molecular interactions between BELL1 and MADS box factors support ovule development in Arabidopsis.

Authors:  Vittoria Brambilla; Raffaella Battaglia; Monica Colombo; Simona Masiero; Stefano Bencivenga; Martin M Kater; Lucia Colombo
Journal:  Plant Cell       Date:  2007-08-10       Impact factor: 11.277

7.  Determination of the nuclear magnetic resonance solution structure of an Antennapedia homeodomain-DNA complex.

Authors:  M Billeter; Y Q Qian; G Otting; M Müller; W Gehring; K Wüthrich
Journal:  J Mol Biol       Date:  1993-12-20       Impact factor: 5.469

Review 8.  Ring the BELL and tie the KNOX: roles for TALEs in gynoecium development.

Authors:  Nicolas Arnaud; Véronique Pautot
Journal:  Front Plant Sci       Date:  2014-03-20       Impact factor: 5.753

Review 9.  Homeodomain proteins: an update.

Authors:  Thomas R Bürglin; Markus Affolter
Journal:  Chromosoma       Date:  2015-10-13       Impact factor: 4.316

10.  The roles of segmental and tandem gene duplication in the evolution of large gene families in Arabidopsis thaliana.

Authors:  Steven B Cannon; Arvind Mitra; Andrew Baumgarten; Nevin D Young; Georgiana May
Journal:  BMC Plant Biol       Date:  2004-06-01       Impact factor: 4.215

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