| Literature DB >> 35223700 |
Congcong Shi1, Sitao Li2, Yu Gao3, Zhirong Deng2, Hu Hao2, Xin Xiao2.
Abstract
Methylmalonic acidaemia (MMA) and ornithine transcarbamylase deficiency (OTCD) are both intoxication-type inborn errors of metabolism (IEM). Presently, genetic testing is the primary method for prenatally diagnosing these diseases. However, some reports have demonstrated that mass spectrometry approaches can prenatally diagnose some forms of inborn errors of metabolism using amniotic fluid. Therefore, in this study, genetic and mass spectrometry approaches were used for prenatally diagnosing MMA and OTCD. We collected amniotic fluid samples from 19 foetuses referred, 15 cases were referred for MMA and 4 for OTCD. Of the 15 MMA cases, seven were affected, as determined by genetic testing and the metabolite levels; the characteristic metabolites propionylcarnitine (C3), C3/acetylcarnitine (C2) ratio, methylmalonic acid and methylcitrate levels were significantly higher than the reference range. Eight foetuses were unaffected, and the C3, C3/C2 ratio, methylmalonic acid and methylcitrate levels were within the reference range. The C3, C3/C2, methylmalonic acid, and methylcitrate levels in the amniotic fluid significantly differed between the affected and unaffected foetuses (P = 0.0014, P = 0.0014, P = 0.0003, P = 0.0014, respectively). Moreover, the homocysteine level increased in the amniotic fluid of affected foetuses with MMACHC gene mutations. Of the four OTCD cases, genetic testing confirmed that two foetuses were affected and two were unaffected. However, the characteristic metabolite levels were within the reference range for all foetuses, including citrulline, orotic acid, and uracil. The genetic testing results were confirmed to be correct through the abortion tissue of the foetus and the postnatal follow-up. Our results suggest that mass spectrometry approaches are convenient method for improving the prenatal diagnosis of MMA. The characteristic metabolites C3, C3/C2, methylmalonic acid, and methylcitrate levels in amniotic fluid were reliable biochemical markers for the prenatal diagnosis of MMA.Entities:
Keywords: gas chromatography mass spectrometry; methylmalonic acidaemia; ornithine transcarbamylase deficiency; prenatal diagnosis; tandem mass spectrometry
Year: 2022 PMID: 35223700 PMCID: PMC8864115 DOI: 10.3389/fped.2022.824399
Source DB: PubMed Journal: Front Pediatr ISSN: 2296-2360 Impact factor: 3.418
Gene mutations and clinical diagnosis of 19 probands.
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| F1 | Female |
| c.1741C > T (p.Arg581Ter) | c.385 + 5G > A (splicing) | mut-type MMA |
| F2 | Male |
| c.1630_1631del insTA (p.Gly544Ter) | c.753G > T (p.Lys251Asn) | mut-type MMA |
| F3 | Male |
| c.1106C > T (p.Arg369His) | c.1159T > G (p.Thr387Pro) | mut-type MMA |
| F4 | Female |
| c.424A > G (p.Thr142Ala) | c.323G > A (p.Arg108His) | mut-type MMA |
| F5 | Male |
| c.729_730insTT (p.Asp244LeufsTer39) | c.1850T > C (p. Leu617Arg) | mut-type MMA |
| F6 | Male |
| c.729_730insTT (p.Asp244LeufsTer39) | c.1663G > A (p.Ala555Thr) | mut-type MMA |
| F7 | Male |
| c.323G > A(p.Arg108His) | c.323G > A(p.Arg108His) | mut-type MMA |
| F8 | Female |
| c.1280G > A (p.Gly427Asp) | c.1031C > A (p.Ser344Cys) | mut-type MMA |
| F9 | Male |
| c.1106G > A (p.Arg369His) | c.1677-1G > A (splicing) | mut-type MMA |
| F10 | Female |
| c.289_290delGG (p.Gly97ValfsTer120) | c.566G > A (p.Cys189Tyr) | cblB-type MMA |
| F11 | Female |
| c.482G > A (p.Arg161Gln) | c.80A > G (p.Gln27Arg) | cblC-type MMA |
| F12 | Male |
| c.228_231delTGAC (p.Asp77GlnfsTer22) | c.609G > A (p.Trp203Ter) | cblC-type MMA |
| F13 | Female |
| c.567dupT (p.Ile190TyrfsTer13) | c.609G > A (p.Trp203Ter) | cblC-type MMA |
| F14 | Male |
| c.80A > G (p.Gln27Arg) | c.217C > T (p.Arg73Ter) | cblC-type MMA |
| F15 | Male |
| c.609G > A (p.Trp203Ter) | c.658_660del (p.Lys220del) | cblC-type MMA |
| F16 | Male |
| - | c.782T > C (p.Ile261Thr) | OTCD |
| F17 | Male |
| - | c.867 + 1G > C (splicing) | OTCD |
| F18 | Male |
| - | c.103insA (p.Val35SerfsX7) | OTCD |
| F19 | Male |
| - | c.512A > G (p.Gln171Arg) | OTCD |
MMA, Methylmalonic Acidemia; OTCD, Ornithine transcarbamylase deficiency.
The Mutation is Hemizygous.
The characteristic metabolite levels and DNA sequencing results in the amniotic fluid samples of 15 foetuses from MMA families referred.
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| F1 | 17 weeks |
| 0.25 | 1.58 | 0.17 |
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| – | c.385 + 5G > A (splicing) | Unaffected |
| F2 | 19 weeks |
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| 4.31 |
| c.1630_1631delinsTA (p.Gly544Ter) | c.753G > T (p.Lys251Asn) | Affected |
| F3 | 17 weeks |
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| 5.77 |
| c.1106C > T (p.Arg369His) | c.1159T > G (p.Thr387Pro) | Affected |
| F4 | 16 weeks |
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| 4.68 |
| c.424A > G (p.Thr142Ala) | c.323G > A (p.Arg108His) | Affected |
| F5 | 17 weeks |
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| 6.07 |
| c.729_730insTT (p.Asp244LeufsTer39) | c.1850T > C (p. Leu617Arg) | Affected |
| F6 | 16 weeks | 1.09 | 0.13 | 1.63 | 0.02 | 4.66 |
| – | – | Unaffected |
| F7 | 18 weeks | 0.82 | 0.17 | 1.15 | 0.52 | 2.37 |
| – | – | Unaffected |
| F8 | 16 weeks | 1.29 | 0.18 | 1.30 | 0.46 | 6.29 |
| – | c.1031C > A (p.Ser344Cys) | Unaffected |
| F9 | 18 weeks |
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| 6.44 |
| c.1106G > A (p.Arg369His) | c.1677-1G > A (splicing) | Affected |
| F10 | 20 weeks | 0.48 | 0.07 | 1.24 | 0.26 | 4.27 |
| c.289_290delGG (p.Gly97ValfsTer120) | – | Unaffected |
| F11 | 17 weeks |
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| c.482G > A (p.Arg161Gln) | c.80A > G (p.Gln27Arg) | Affected |
| F12 | 19 weeks |
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| c.228_231delTGAC (p.Asp77GlnfsTer22) | c.609G > A (p.Trp203Ter) | Affected |
| F13 | 18 weeks | 0.77 | 0.24 | 1.28 | 0.10 | 4.07 |
| – | – | Unaffected |
| F14 | 18 weeks | 0.79 | 0.14 | 1.53 | 0.10 | 3.84 |
| c.80A > G (p.Gln27Arg) | – | Unaffected |
| F15 | 17 weeks | 0.91 | 0.14 | 0.8 | 0.7 | 1.3 |
| c.609G > A (p.Trp203Ter) | – | Unaffected |
MMA, Methylmalonic Acidemia; C3, Propionylcarnitine; C2, Acetylcarnitine; Hcy, Homocysteine. Reference range: C3 (0.16–1.53) μmol/L, C3/C2 (0.08–0.57), Methylmalonic acid (0.97–1.81)μmol/L, Methylcitrate (0.01–0.79) μmol/L, Hcy (2.40–6.95) μmol/L. Elevated metabolites are shown in bold.
Figure 1Scatterplot showing the distribution of characteristic metabolite levels in unaffected and affected of 15 cases amniotic fluids referred for MMA. (A) The distribution of C3 levels in amniotic fluids between affected and unaffected samples. (B) The distribution of C3/C2 ratios in amniotic fluids between affected and unaffected samples. (C) The distribution of methylmalonic acid levels in amniotic fluids between affected and unaffected samples. (D) The distribution of methylcitrate in amniotic fluids between affected and unaffected samples. (E) The distribution of Hcy in amniotic fluids between two foetuses with compound heterogeneous MMACHC gene mutations and other amniotic fluid samples unaffected for the MMACHC gene. Horizontal lines, median values. P values were determined by the Wilcoxon rank sum test.
The characteristic metabolites levels and DNA sequencing results in the amniotic fluid samples of four foetuses from OTCD families referred.
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| F16 | 17weeks | 15.27 | 0 | 0 |
| – | Unaffected |
| F17 | 17weeks | 8.99 | 0 | 0 |
| c.867 + 1G > C (splicing) | Affected |
| F18 | 18weeks | 9.86 | 0 | 0 |
| – | Unaffected |
| F19 | 16weeks | 8.86 | 0 | 0 |
| c.512A > G (p.Gln171Arg) | Affected |
OTCD, Ornithine transcarbamylase deficiency; Cit, Citrulline; orotic acid, Orotate; Reference range: citrulline > 3.30 μmol/L, orotic acid (Orotate) = 0.00 mmol/mol creatinine, and Uracil = 0.00 mmol/mol creatinine.
The Mutation is Hemizygous.