| Literature DB >> 35220423 |
D Catalina Fernández1,2, Sherah L VanLaerhoven1, Esteban Rodríguez-Leyva3, Y Miles Zhang2, Roselyne Labbé4.
Abstract
The pepper weevil Anthonomus eugenii Cano (Coleoptera: Curculionidae) is a pest of economic importance for Capsicum species pepper in North America that attacks the reproductive structures of the plant. The insect is distributed across Mexico, the United States, and the Caribbean, and is occasionally found during the pepper growing season in southern Ontario, Canada. Continuous spread of the insect to new areas is partially the result of global pepper trade. Here, we describe the genetic diversity of the pepper weevil using the mitochondrial COI barcoding region across most of its geographic range. In this study, 44 (H1-H44) highly similar haplotypes were identified, the greatest number of haplotypes and haplotype diversity were observed among specimens from its native Mexico, followed by specimens from the United States. Unlike Mexico, a low haplotype diversity was found among specimens from Canada, the Dominican Republic, Italy, and the Netherlands. Out of these 44 haplotypes, 29 are reported for the first time. Haplotype diversity in the Canadian population suggests either multiple and continuous introductions of the pepper weevil into this area or a single introduction of genetically diverse individuals. We discuss the importance of such population genetic data in tailoring pepper weevil management programs, using Canada as an example.Entities:
Keywords: zzm321990 Anthonomus eugeniizzm321990 ; North America; haplotype analysis; pepper plant
Mesh:
Substances:
Year: 2022 PMID: 35220423 PMCID: PMC8882256 DOI: 10.1093/jisesa/ieac012
Source DB: PubMed Journal: J Insect Sci ISSN: 1536-2442 Impact factor: 1.857
Sample locality, sample size, and haplotypes of pepper weevil specimens amplified and used in analyses
| Population | Sample size | Haplotypes |
|---|---|---|
| Canada | ||
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| ||
| Farm 7 | 8 | H22 |
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| Farm 5 | 5 | H7 |
| Farm 10 | 20 | H22 |
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| Farm 1 | 2 | H22 |
| Farm 2 | 2 | H7, H22 |
| Farm 3 | 1 | H22 |
| Farm 4 | 8 | H22 |
| Farm 6 | 6 | H22 |
| Farm 8 | 11 | H7, H22 |
| Farm 9 | 8 | H22 |
| Farm11 | 15 | H7, H22, H27 |
| Mexico | ||
|
| ||
| Chihuahua | 4 | H16, H33, |
| Coahuila | 3 | H1, H7 |
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| Oaxaca | 16 | H2, H7, |
| Puebla | 21 | H1, |
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| San Luis Potosi | 1 | H8 |
| Tamaulipas | 15 | H2, H7, H8, H10, H19 |
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| Jalisco | 16 | H1, H7, |
| Nayarit | 2 | H8, H11 |
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| Aguascalientes | 1 |
|
| Guanajuato | 22 | H1, H2, H7, H8, H15, H17, H18 |
| Hidalgo | 2 |
|
| Queretaro | 18 | H1, H5, H7, H8, H9, H16 |
| Unknown | 6 | H4, H8, H14, H19, |
|
| 21 | H7, H8, H9, H16, H19, H20, |
|
| 12 | H1, H2, H4, H8, H11, |
| United States | ||
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| Florida | 17 | H1, H7, H8 |
| Georgia | 2 | H1 |
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| New Jersey | 37 | H1, H7, H8 |
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| California | 14 | H1, H26 |
| Dominican Republic | 45 | H1, |
| Italy | 2 | H1 |
| The Netherlands | 32 | H7 |
Singleton haplotypes for each population in bold.
Fig. 1.Haplotype median-joining network of the COI barcoding region (658 bp) of pepper weevil (n = 359) with sample locations differentiated by color. Circles (nodes) refer to the haplotypes (H1–H44) and circle size to haplotype frequency. Dashed lines in links (edges) refer to number of nucleotide differences between haplotypes. Black circles represent unsampled haplotypes.
Fig. 2.Neighbor-joining tree showing the phylogenetic relationship of 44 COI barcoding region (658 bp) haplotypes of the pepper weevil. Colored nodes represent the percentage of bootstrap confidence interval with 100 iterations.
Genetic statistics of pepper weevil populations
| Populations | Haplotypes | Unique Haplotypes | Haplotype diversity | Nucleotide diversity | Tajima’s D |
|---|---|---|---|---|---|
|
| |||||
| Dresden | 1 | 0 | 0 | 0 | - |
| Kingsville | 2 | 0 | 0.33 ± 0.09 | 0.002 ± 0.001 | 0.69 ( |
| Leamington | 3 | 1 | 0.37 ± 0.07 | 0.002 ± 0.001 | 0.57 ( |
|
| |||||
| Northern | 6 | 2 | 0.95 ± 0.05 | 0.007 ± 0.005 | –0.45 ( |
| Southern | 19 | 10 | 0.91 ± 0.03 | 0.004 ± 0.002 | –1.65 ( |
| Eastern | 5 | 0 | 0.72 ± 0.09 | 0.003 ± 0.002 | –1.28 ( |
| Western | 10 | 3 | 0.82 ± 0.07 | 0.004 ± 0.002 | –1.64 ( |
| Central | 16 | 4 | 0.87 ± 0.03 | 0.005 ± 0.003 | –1.30 ( |
| Sinaloa | 9 | 3 | 0.8 ± 0.07 | 0.006 ± 0.004 | –0.17 ( |
| Yucatan | 9 | 3 | 0.95 ± 0.04 | 0.007 ± 0.004 | –0.15 ( |
|
| |||||
| Southern | 3 | 0 | 0.60 ± 0.08 | 0.002 ± 0.001 | 0.78 ( |
| Eastern | 3 | 0 | 0.60 ± 0.03 | 0.002 ± 0.001 | 1.48 ( |
| Western | 2 | 1 | 0.36 ± 0.13 | 0.002 ± 0.002 | 0.53 ( |
|
| 3 | 2 | 0.09 ± 0.06 | 0.0003 ± 0.0004 | –1.87 ( |
|
| 1 | 0 | 0 | 0 | - |
|
| 1 | 0 | 0 | 0 | - |
| Study total | - | - | 0.83 ± 0.01 | 0.004 ± 0.003 | –1.74 ( |
Fig. 3.Haplotype rarefaction curve. Shaded area refers to the 95% confidence interval obtained from 10,000 permutations.
Results of an analysis of molecular variance (AMOVA) following the grouping of COI sequences from specimens with geographic proximity within countries (populations).
| Source of variation |
| Sums of squares | Variance component | % Total variation | Ф-statistic |
|
|---|---|---|---|---|---|---|
| Among countries | 5 | 153.79 | 0.34 | 12.02 | 0.12 | 0.06 |
| Among populations within countries | 11 | 90.01 | 0.31 | 10.77 | 0.12 |
|
| Within populations | 378 | 824.65 | 2.18 | 77.20 | 0.23 |
|
Fig. 4.STRUCTURE plot of the most likely number of populations at K = 2 (top), and the ΔK values at K = 1–6 (bottom).