Literature DB >> 35218535

Monitoring Cellular Responses to Infection with Fluorescent Biosensors.

Amena Aktar1, Kasia M Wodz1, Bryan Heit2,3.   

Abstract

Fluorescent biosensors are chemically or genetically encoded reporters of cellular processes, signaling pathways, or biomolecule concentration, whose output is quantified using fluorescence microscopy or fluorescence spectrometry. These biosensors can detect the target activity or metabolites via mechanisms including conversion between nonfluorescent and fluorescent forms, changes in reporter intensity, changes in the intensity ratio across fluorescence channels, alterations to the subcellular localization of the bioreporter, and by fluorescence resonance energy transfer. Here, we describe the use of a chemical photoconverting biosensor, and genetically encoded localization and ratiometric biosensors, for monitoring the cellular and signaling processes involved in pathogen-induced apoptosis and the resulting destruction of the pathogen. While this study uses biosensors to monitor responses to infection, these approaches can be readily translated to other cellular systems and other fluorescent biosensors.
© 2022. The Author(s), under exclusive license to Springer Science+Business Media, LLC, part of Springer Nature.

Entities:  

Keywords:  Apoptosis; Bacteria; Biosensors; Fluorescence microscopy; Infection; Lysosome; Phagocytosis; Signaling; Vesicular trafficking; pH

Mesh:

Substances:

Year:  2022        PMID: 35218535     DOI: 10.1007/978-1-0716-2051-9_6

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  31 in total

Review 1.  A Critical and Comparative Review of Fluorescent Tools for Live-Cell Imaging.

Authors:  Elizabeth A Specht; Esther Braselmann; Amy E Palmer
Journal:  Annu Rev Physiol       Date:  2016-11-16       Impact factor: 19.318

2.  Measuring Phagosomal pH by Fluorescence Microscopy.

Authors:  Johnathan Canton; Sergio Grinstein
Journal:  Methods Mol Biol       Date:  2017

Review 3.  Mitochondrial membrane potential probes and the proton gradient: a practical usage guide.

Authors:  Seth W Perry; John P Norman; Justin Barbieri; Edward B Brown; Harris A Gelbard
Journal:  Biotechniques       Date:  2011-02       Impact factor: 1.993

4.  Multiplexed Fluorescence Imaging of ERK and Akt Activities and Cell-cycle Progression.

Authors:  Gembu Maryu; Michiyuki Matsuda; Kazuhiro Aoki
Journal:  Cell Struct Funct       Date:  2016-05-28       Impact factor: 2.212

Review 5.  Fluorescence microscopy.

Authors:  Michael J Sanderson; Ian Smith; Ian Parker; Martin D Bootman
Journal:  Cold Spring Harb Protoc       Date:  2014-10-01

6.  A quantitative protocol for intensity-based live cell FRET imaging.

Authors:  Clemens F Kaminski; Eric J Rees; Gabriele S Kaminski Schierle
Journal:  Methods Mol Biol       Date:  2014

7.  Visualization of phosphoinositides that bind pleckstrin homology domains: calcium- and agonist-induced dynamic changes and relationship to myo-[3H]inositol-labeled phosphoinositide pools.

Authors:  P Várnai; T Balla
Journal:  J Cell Biol       Date:  1998-10-19       Impact factor: 10.539

8.  Ratiometric biosensors based on dimerization-dependent fluorescent protein exchange.

Authors:  Yidan Ding; Jiao Li; Jhon Ralph Enterina; Yi Shen; Issan Zhang; Paul H Tewson; Gary C H Mo; Jin Zhang; Anne Marie Quinn; Thomas E Hughes; Dusica Maysinger; Spencer C Alford; Yan Zhang; Robert E Campbell
Journal:  Nat Methods       Date:  2015-01-26       Impact factor: 28.547

9.  Red fluorescent protein-based cAMP indicator applicable to optogenetics and in vivo imaging.

Authors:  Kazuki Harada; Motoki Ito; Xiaowen Wang; Mika Tanaka; Devina Wongso; Ayumu Konno; Hirokazu Hirai; Hajime Hirase; Takashi Tsuboi; Tetsuya Kitaguchi
Journal:  Sci Rep       Date:  2017-08-04       Impact factor: 4.379

10.  Diversity in ATP concentrations in a single bacterial cell population revealed by quantitative single-cell imaging.

Authors:  Hideyuki Yaginuma; Shinnosuke Kawai; Kazuhito V Tabata; Keisuke Tomiyama; Akira Kakizuka; Tamiki Komatsuzaki; Hiroyuki Noji; Hiromi Imamura
Journal:  Sci Rep       Date:  2014-10-06       Impact factor: 4.379

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