| Literature DB >> 35218432 |
Shanshan Feng1, Juping Zhang2, Juan Li2,3, Xiao-Feng Luo1, Huaiping Zhu4, Michael Y Li5, Zhen Jin6,7.
Abstract
In order to understand how Wuhan curbed the COVID-19 outbreak in 2020, we build a network transmission model of 123 dimensions incorporating the impact of quarantine and medical resources as well as household transmission. Using our new model, the final infection size of Wuhan is predicted to be 50,662 (95%CI: 46,234, 55,493), and the epidemic would last until April 25 (95%CI: April 23, April 29), which are consistent with the actual situation. It is shown that quarantining close contacts greatly reduces the final size and shorten the epidemic duration. The opening of Fangcang shelter hospitals reduces the final size by about 17,000. Had the number of hospital beds been sufficient when the lockdown started, the number of deaths would have been reduced by at least 54.26%. We also investigate the distribution of infectious individuals in unquarantined households of different sizes. The high-risk households are those with size from two to four before the peak time, while the households with only one member have the highest risk after the peak time. Our findings provide a reference for the prevention, mitigation and control of COVID-19 in other cities of the world.Entities:
Keywords: COVID-19; Final size; Household basic reproduction number; Household transmission model; Medical resources; Metapopulation network model; Quarantine
Mesh:
Year: 2022 PMID: 35218432 PMCID: PMC8881901 DOI: 10.1007/s11538-021-00989-y
Source DB: PubMed Journal: Bull Math Biol ISSN: 0092-8240 Impact factor: 3.871
Fig. 1a The cumulative confirmed cases; b the number of DHs and FSHs beds in Wuhan
Fig. 2The distribution of household sizes in Hubei Province, China
Fig. 3The metapopulation network of Wuhan. Nodes in this metapopulation network fall into two categories, one representing a household and the other representing a public place. Households are further divided into two types: quarantined households and unquarantined households based on whether the presence or absence of a confirmed case
Fig. 4The flowchart of household model. The dotted arrows indicate the change in the number of households due to the confirmation of I; the solid arrows indicate the change in the number of households due to the infection of S
Definition of variables and parameters
| Variables/Parameters | Definition |
|---|---|
| The number of unquarantined households in which the number of | |
| The number of quarantined households in which the number of susceptible individuals and infectious individuals is | |
| The number of centrally quarantined susceptible individuals at time | |
| The number of centrally quarantined infectious individuals at time | |
| The number of confirmed cases at time | |
| Household quarantined rate (probability of the family members in a unquarantined household being quarantined at home when | |
| Centrally quarantined rate (probability of the family members in a unquarantined household being centrally quarantined when | |
| Transmission rate within household | |
| Transmission rate in the public place | |
| The average time from infection to hospitalization (referred to as diagnosis time) of an infectious individual, which depends on medical resources (the number of beds, etc.) | |
| Removed rate |
Definition and value of parameters
| Parameter | Definition | Value | Confidence interval | Source |
|---|---|---|---|---|
| – | 0.2590 | [0.2589, 0.2591] | MCMC | |
| – | 0.1581 | [0.1580, 0.1582] | MCMC | |
| – | 0.5219 | [0.5213, 0.5225] | MCMC | |
| – | 0.3919 | [0.3915, 0.3924] | MCMC | |
| – | 1/10 | – | Ref. Luo et al. ( | |
| – | 5 | – | See Footnote 5 | |
| – | [9, 21] | – | See Footnote 5 | |
| – | 3,108,800 | – | See Footnote 13 | |
| – | 10,892,900 | – | See Footnote 13 | |
| – | – | – | Calculated by Footnote 14 | |
| – | – | – | Eq. ( | |
| – | 11,123 | – | Calculated by Footnote 13 | |
| – | – | – | Eq. ( | |
| – | 2503 | – | Calculated by Footnotes 3 and 15 | |
| The number of individuals who are household quarantined | – | – | Eq. ( | |
| The number of | – | – | Eq. ( | |
| The number of quarantined household with size | – | – | Eq. ( | |
| The number of | – | – | Eq. ( |
The initial values of variables
| Variable | Initial value | Source |
|---|---|---|
| – | Eq. ( | |
| – | Eq. ( | |
| 441 | Calculated by Footnote 3 | |
| – | Eq. ( | |
| – | Eq. ( |
Fig. 5Fitting model solution to actual data. The solid blue line shows the solution curve of the household model. The red five-pointed stars are the actual data. The gray area is 95%CI (Color figure online)
Fig. 6The total number and the distribution of I in the unquarantined households
Fig. 7The number of quarantined infectious individuals (blue line) and confirmed cases (red line) (Color figure online)
Fig. 8The effect of quarantining close contacts on the transmission of COVID-19. Subfigure a shows three extreme cases: purple means no close contacts are quarantined; black means all close contacts are quarantined at home; red means all close contacts are centrally quarantined. Subfigure b compares the case where the centralized quarantine rate and the home quarantine rate are both greater than 0, and the sum of the two is 1 and 0.8, respectively (Color figure online)
Fig. 9The impact of the implementation time of complete centralized quarantine on the spread of COVID-19
Fig. 10The necessity of FSHs
Fig. 11The effect of beds on deaths
Fig. 12The flowchart of household model with more detailed division. The black solid lines represent infection; the black dashed lines are caused by the transformation of C; the yellow lines mean that I is confirmed and that his family members are quarantined; the gray line indicates the release of quarantine (Color figure online)