| Literature DB >> 35205365 |
Guido Antoniutti1, Fiama Giuliana Caimi-Martinez1, Jorge Álvarez-Rubio1,2, Paula Morlanes-Gracia3, Jaume Pons-Llinares2,4, Blanca Rodríguez-Picón5, Elena Fortuny-Frau2,4, Laura Torres-Juan2,6, Damian Heine-Suner2,6, Tomas Ripoll-Vera1,2,7.
Abstract
Hypertrophic cardiomyopathy (HCM) is a genetic disease characterised by increased left ventricle (LV) wall thickness caused by mutations in sarcomeric genes. Finding a causal mutation can help to better assess the proband's risk, as it allows the presence of the mutation to be evaluated in relatives and the follow-up to be focused on carriers. We performed an observational study of patients with HCM due to the novel p.Arg652Lys variant in the MYH7 gene. Eight families and 59 patients are described in the follow-up for a median of 63 months, among whom 39 (66%) carry the variant. Twenty-five (64%) of carriers developed HCM. A median maximum LV wall thickness of 16.5 mm was described. The LV hypertrophy was asymmetric septal in 75% of cases, with LV outflow tract obstruction in 28%. The incidence of a composite of serious adverse cardiovascular events (sudden death, aborted sudden death, appropriate implantable cardiac defibrillator discharge, an embolic event, or admission for heart failure) was observed in five (20%) patients. Given the finding of the p.Arg652Lys variant in patients with HCM, but not in controls, with evident segregation in patients with HCM from eight families and the location in an active site of the protein, we can define this variant as likely pathogenic and associated with the development of HCM.Entities:
Keywords: NGS for diagnostics of CVDs; cardiomyopathies; cardiomyopathy; genetic; genetic testing; hypertrophic cardiomyopathy; next-generation sequencing; variant classification; variant interpretation
Mesh:
Substances:
Year: 2022 PMID: 35205365 PMCID: PMC8872101 DOI: 10.3390/genes13020320
Source DB: PubMed Journal: Genes (Basel) ISSN: 2073-4425 Impact factor: 4.096
Figure 1Family tree of a typical family with HCM. (II.5 corresponds to index case N°7 in Table 1) Most HCMs are inherited in an autosomal dominant fashion. Affected individuals are shown in black, and healthy carriers of the p.Arg652Lys variant (E1) are shown with a central black mark. Using a genetic panel, the variant was identified in the proband (arrow) after an episode of aborted sudden death. Other members of the family who inherited the variant were affected clinically but without severe events such as the proband, which shows variable expressivity of the variant. ICD: Implantable Cardiac Defibrillator. −/−: Variant not found. −/+: Heterozygous variant found.
Characteristics of the population with findings of the p.Arg652Lys variant in MYH7.
| Population Characteristics | Clinical Behavior | |||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Family Number | Relation to Index Case | Sex | Age at First Medical Contact | Phenotype | Follow-Up Time (Months) | SD FH in 1st Degree Relatives | Clinical Presentation | AF | NYHA | MLVWT in 1st TTE (mm) | MLVWT in Follow-Up (mm) | LVOT Obstruction | LVEF at Diagnosis (%) | LA Maximum Diameter in Follw-Up (mm) | NSVT | Septal Reduction Therapy | HF | Embolic Event (Age) | SD (Age) | ASD (Age) |
| 1 | Index case | M | 34 | HCM | 127 | No | Sincope | No | 1 | 22 | 24 | Yes | ? | 35 | ||||||
| Sister | F | 39 | Healthy Carrier | 114 | No | Casual or family Screening | No | 1 | 11 | 11 | No | 65 | 35 | |||||||
| 2 | Index case | F | 79 | HCM | 9 | No | Palpitations | Yes | 1 | 15 | 15 | No | 60 | 43,7 | Yes | Yes (70) | ||||
| Son | M | 51 | HCM | 113 | No | Casual or family Screening | No | 1 | 12 | 13 | No | 60 | 35 | |||||||
| Son | M | 45 | HCM | 129 | No | Casual or family Screening | No | 1 | 13 | 13 | No | 60 | 35 | |||||||
| Grandson | M | 15 | Healthy Carrier | 112 | No | Casual or family Screening | No | 1 | 9 | 9 | ? | ? | ? | |||||||
| 3 | Index case | M | 31 | HCM | 198 | No | Angina | No | 1 | 18 | 18 | Yes | 60 | 43 | Yes | |||||
| Mother | F | 73 | HCM | 15 | No | Angina | No | 1 | 22 | 22 | Yes | 71 | 58 | |||||||
| 4 | Index case | F | 53 | HCM | 197 | No | Angina | No | 1 | 11 | 18 | No | ? | 35 | Yes | |||||
| Daughter | F | 30 | Healthy Carrier | 63 | No | Casual or family Screening | No | 1 | 11 | 11 | No | 60 | 35 | |||||||
| Aunt | F | 80 | HCM | 114 | No | Palpitations | Yes | 1 | 12 | 12 | No | 71 | 55 | Yes (92) | ||||||
| 5 | Index case | F | 40 | HCM | 62 | No | Angina | No | 1 | 20 | 21 | Yes | 60 | 51 | ||||||
| Brother | M | 38 | HCM | 74 | No | Casual or family Screening | No | 1 | 19 | 22 | Si | 60 | 39 | Yes | ||||||
| Daughter | F | 16 | Healthy Carrier | 85 | No | Casual or family Screening | No | 1 | 6 | 9 | No | 60 | 35 | |||||||
| Father | M | 70 | HCM | 17 | No | Casual or family Screening | No | 1 | 14 | 14 | No | 55 | 39 | Yes (69) | ||||||
| Niece | F | 31 | HCM | 15 | No | Casual or family Screening | No | 1 | ? | ? | ? | ? | ? | |||||||
| Uncle | M | 65 | HCM | 69 | No | Casual or family Screening | No | 1 | 13 | 13 | No | 65 | 41 | |||||||
| 6 | Index case | M | 45 | HCM | 207 | No | Casual or family Screening | No | ? | 15 | 15 | ? | ? | 35 | Yes (64) | |||||
| Sister | F | 56 | HCM | 0 | Yes | Casual or family Screening | No | 1 | ? | ? | ? | ? | ? | |||||||
| Brother | M | HCM | 0 | No | Casual or family Screening | Yes | ? | ? | ? | ? | ? | ? | ||||||||
| Sister | F | 61 | HCM | 20 | Yes | Casual or family Screening | No | 1 | 15 | 17 | Yes | 70 | 40 | |||||||
| Daughter | F | Unknown | 0 | Yes | Casual or family Screening | No | ? | ? | ? | ? | ? | ? | ||||||||
| Grandson | M | 32 | HCM | 15 | No | Casual or family Screening | No | 1 | 16 | 16 | ? | 62 | 35 | |||||||
| 7 | Index case | F | 41 | HCM | 291 | No | Dyspnoea | No | 2 | ? | ? | ? | ? | ? | Yes (48) | |||||
| Brother | M | Unknown | 0 | Yes | Casual or family Screening | No | ? | ? | ? | ? | ? | ? | Yes (70) | |||||||
| Brother | M | 69 | HCM | 35 | Yes | Casual or family Screening | No | 1 | 22 | 22 | No | 62 | 42 | Yes | ||||||
| Daughter | F | 25 | Healthy Carrier | 63 | Yes | Casual or family Screening | No | 1 | 9 | 9 | No | 65 | 33 | |||||||
| Daughter | F | 24 | Healthy Carrier | 64 | Yes | Casual or family Screening | No | 1 | 12 | 12 | No | 71 | 35 | |||||||
| Niece | F | 37 | Healthy Carrier | 55 | Yes | Casual or family Screening | No | 1 | 8 | 9 | No | 69 | 34 | |||||||
| Nephew | M | 39 | HCM | 65 | Yes | Casual or family Screening | No | ? | 13 | 16 | Yes | 75 | 40 | |||||||
| Niece | F | 41 | Healthy Carrier | 0 | Yes | Casual or family Screening | No | 1 | 8 | 8 | No | 66 | 30 | |||||||
| Niece | F | 46 | HCM | 91 | No | Casual or family Screening | No | 1 | 13 | 22 | Si | 80 | 37 | |||||||
| Nephew | M | 30 | HCM | 92 | No | Casual or family Screening | No | 1 | 16 | 25 | No | 75 | 43 | |||||||
| Grand nephew | M | 11 | Healthy Carrier | 26 | No | Casual or family Screening | No | 1 | 6 | 6 | No | 74 | 26 | |||||||
| Grand nephew | M | 12 | Healthy Carrier | 43 | No | Casual or family Screening | No | 1 | 10 | 11 | No | 71 | 33 | |||||||
| 8 | Index case | F | 59 | HCM | 68 | Yes | Casual or family Screening | No | 1 | 16 | 17 | No | 60 | 39 | ||||||
| Son | M | 19 | Healthy Carrier | 62 | No | Casual or family Screening | No | 1 | 9 | 10 | No | 67 | 37 | |||||||
| Cousin | M | 65 | HCM | 0 | No | Casual or family Screening | No | 1 | 13 | 13 | No | 63 | 39 | |||||||
| Second nephew | M | 32 | Healthy Carrier | 0 | No | Casual or family Screening | No | 1 | 9 | 9 | No | 68 | 33 | |||||||
?: Unknown, ACE: Adverse Cardiovascular Event, AF: Atrial Fibrillation, ASD: Aborted Sudden Death, F: Female, FH: Family History, HCM: Hypertrophic Cardiomyopathy, ICD: Implantable Cardiac Defibrillator, LA: Left Atrium, LVEF: Left Ventricle Ejection Fraction, LVOT: Left Ventricle Outflow Tract, M: Male, MLVWT: Maximum Left Ventricle Wall Thickness, NSVT: Non-sustained Ventricular Tachycardia, NYHA: New York Heart Association dyspnea classification, PCM: Pacemaker, SD: Sudden Death, SDPP: Sudden Death Primary Prevention, SDSP: Sudden Death Secondary Prevention, TTE: Transthoracic Echocardiography.
Demographic, electrocardiographic, and echocardiographic characterization of healthy carriers and HCM patients.
| Healthy Carriers | HCM Patients |
| ||
|---|---|---|---|---|
| Demographic parameters | ||||
| Age at first visit (mean) | 25.1 | 51.4 | <0.0001 | |
| Age at last follow up visit (mean) | 29.6 | 58.2 | <0.0001 | |
| Sex (% female) | 49 | 46 | ns | |
| Electrocardiographic parameters | ||||
| Left Ventricle Hypertrophy (% of patients) | 0 | 30.4 | 0.033 | |
| Pathologic Q waves (% of patients) | 0 | 14.3 | ns | |
| Pathologic Negative T waves (% of patients) | 16.7 | 20 | ns | |
| Echocardiographic parameters | ||||
| LVEF (%) | 66.9 | 64.9 | ns | |
| LV End Diastolic Diameter (mm) | 43.8 | 45.3 | ns | |
| LA Diameter (mm) | 32.3 | 40.3 | 0.0012 | |
| Maximum LV Wall Thickness (mm) | 9 | 16.5 | <0.0001 | |
| RV Hypertrophy (% of patients) | 0 | 4.8 | ns | |
| Altered LV Diastolic Filling Pattern (% of patients) | 8.3 | 27 | ns | |
LA: Left Atrium, LV: Left Ventricle, LVEF: Left Ventricle Ejection Fraction, ns: not significant, RV: Right Ventricle.
Figure 2Family tree of a family studied with the finding of two variants that are potentially associated with heart disease (III.2 corresponds to index case N°5 in Table 1). In genetic studies of patients with HCM and the finding of more than one variant that is not clearly associated with HCM, the pathogenicity of all the variants found should be considered and their family segregation evaluated. In this case, the presence of variants in the MYH7 (E1) and TPM1 (E2) genes is seen in the index case (arrow) with a diagnosis of HCM (effects indicated in black). We observed that only the variant p.Arg652Lys in MYH7 segregates together with the development of HCM in relatives, which is evident in the brother and in a cousin of the index case who presented HCM and only presented the variant in MYH7 without alterations in TPM1. Patients with the MYH7 variant and no HCM phenotype are marked with a central black mark. −/−: Variant not found. −/+: Heterozygous variant found.
Incidence of clinical events in patients with findings of the p.Arg652Lys variant in MYH7.
| Clinical Events | ||
|---|---|---|
| ACE (N-%) | 5 | 20.0% |
| Sudden Death (N-%) | 1 | 4.0% |
| SD under than 50 years of age (N-%) | 0 | 0.0% |
| Aborted SD (N-%) | 1 | 4.0% |
| Apropriate ICD discharge (N-%) | 0 | 0.0% |
| HF (N-%) | 2 | 8.0% |
| HF Admission (N-%) | 0 | 0.0% |
| AF (N-%) | 3 | 12.0% |
| Embolic Event (stroke or peripheral ischemic event) (N-%) | 3 | 12.0% |
| SRT (N-%) | 1 | 4.0% |
| Alcohol Ablation (N-%) | 0 | 0.0% |
| Myectomy (N-%) | 1 | 4.0% |
ACE: Adverse Cardiovascular Event, AF: Atrial Fibrillation, ASD: Aborted Sudden Death, HF: Heart Failure, ICD: Implantable Cardiac Defibrillator, SD: Sudden Death, SRT: Septal Reduction Therapy.
Evidence framework for the pathogenicity classification of the p.Arg652Lys variant according to the criteria of the American College of Medical Genetics and Genomics (ACMG) and the Association for Molecular Pathology (AMP). In this diagram, the criteria are organised according to the type of evidence, as well as their strength.
| ACMG/AMP Clasification. | ||
|---|---|---|
| Class | Criteria for Interpretation | p.Arg652Lys Variant Interpretation [ |
| Pathogenic Moderate (PM1) | Mutational hot spot and/or critical and well-established functional domain | UniProt protein MYH7_HUMAN domain ‘Myosin motor’ has 225 pathogenic variants out of 313 classified variants = 71.9% (greater than 66.7%). |
| Pathogenic Moderate (PM2) | Variant frequency and use of control populations | Variant not found in GnomAD exomes, with good GnomAD exomes coverage (87.1 is greater than 20.0).Variant not found in GnomAD genomes, with good GnomAD genomes coverage (31.3 is greater than 20.0). |
| Pathogenic Moderate (PM5) | Novel missense at the same position | Another amino acid missense variant at this position, Arg652Gly (chr14:23896451 T⇒C), is classified. Pathogenic, two stars (above the minimum of one star) by ClinVar and classified Likely Pathogenic using ACMG. |
| Pathogenic Supporting (PP2) | Variant spectrum | Missense variant in gene |
| Pathogenic Supporting (PP3) | Computational (in silico) data | Pathogenic computational verdict because of six pathogenic predictions from DANN, GERP, dbNSFP.FATHMM, MetaLR, MetaSVM, and MutationTaster (vs. three benign predictions from MutationAssessor, PROVEAN, and SIFT). |