| Literature DB >> 35204652 |
Matic Srdič1,2, Nico D Fessner3, Deniz Yildiz4,5, Anton Glieder6, Markus Spiertz1, Ulrich Schwaneberg2,4.
Abstract
Polycyclic aromatic hydrocarbons (PAHs) and their N- and O-containing derivatives (N-/O-PAHs) are environmental pollutants and synthetically attractive building blocks in pharmaceuticals. Functionalization of PAHs can be achieved via C-H activation by cytochrome P450 enzymes (e.g., P450 CYP3A4) in an environmentally friendly manner. Despite its broad substrate scope, the contribution of CYP3A4 to metabolize common PAHs in humans was found to be small. We recently showcased the potential of CYP3A4 in whole-cell biocatalysis with recombinant yeast Komagataella phaffii (Pichia pastoris) catalysts for the preparative-scale synthesis of naturally occurring metabolites in humans. In this study, we aimed at exploring the substrate scope of CYP3A4 towards (N-/O)-PAHs and conducted a bioconversion experiment at 10 L scale to validate the synthetic potential of CYP3A4 for the preparative-scale production of functionalized PAH metabolites. Hydroxylated products were purified and characterized using HPLC and NMR analysis. In total, 237 mg of fluorenol and 48 mg of fluorenone were produced from 498 mg of fluorene, with peak productivities of 27.7 μmol/L/h for fluorenol and 5.9 μmol/L/h for fluorenone; the latter confirmed that CYP3A4 is an excellent whole-cell biocatalyst for producing authentic human metabolites.Entities:
Keywords: CYP3A4; PAHs; bioreactor; cytochrome P450 3A4; preparative-scale synthesis; whole-cell biotransformation
Mesh:
Substances:
Year: 2022 PMID: 35204652 PMCID: PMC8961652 DOI: 10.3390/biom12020153
Source DB: PubMed Journal: Biomolecules ISSN: 2218-273X
Figure 1Screening of PAHs with CYP3A4. The heat map on the left indicates the conversion efficiency of P450 3A4 towards common PAHs, hydroxylated PAHs, as well as N- and O-containing PAHs. On the right, the synthetic fate of 1, 4 and 8 upon K. phaffii whole-cell biotransformation employing CYP3A4 is depicted.
Figure 2Bioreactor biotransformation conversion of 1 (grey dots) into 2 (green dots) and 3 (purple dots) as analyzed by HPLC. Percentage amounts in sample were determined using calibration curves obtained from commercially bought references.
Figure 3Bioreactor biotransformation conversion of 1 sample chromatograms at time points 0 h (grey line), 7 h (purple) and 26 h (green). Due to greater absorbance of 3 at 256 nm, the chromatographic peak is larger.
Figure 4Stacked 1H NMR spectra at representative time intervals of the bioreactor biotransformation of sample 1 illustrate its conversion to 2 and 3 by the decrease in the aliphatic H-9 peak at 3.91 ppm (orange) and the simultaneous increase in the peak of the carbinol proton at 5.58 ppm (red), or the appearance of new peaks at 7.53–7.43 ppm (blue).
NMR-derived molar percentages of different time point samples.
| 0 min (mol%) | 420 min (mol%) | 1560 min (mol%) | |
|---|---|---|---|
| Fluorene ( | 97.1 | 52.9 | 42.7 |
| Fluorenol ( | 2.9 | 38.8 | 47.6 |
| Fluorenone ( | 0.0 | 8.3 | 9.7 |
| Sampled weight in 200 mL | 15.2 mg | 14.7 mg | 15.4 mg |