Literature DB >> 35190685

Carbon-negative production of acetone and isopropanol by gas fermentation at industrial pilot scale.

Fungmin Eric Liew1, Robert Nogle1, Tanus Abdalla1, Blake J Rasor2,3,4, Christina Canter1, Rasmus O Jensen1, Lan Wang1, Jonathan Strutz1, Payal Chirania5,6, Sashini De Tissera1, Alexander P Mueller1, Zhenhua Ruan1, Allan Gao1, Loan Tran1, Nancy L Engle5, Jason C Bromley1, James Daniell1, Robert Conrado1, Timothy J Tschaplinski5, Richard J Giannone5, Robert L Hettich5, Ashty S Karim2,3,4, Séan D Simpson1, Steven D Brown1, Ching Leang7, Michael C Jewett8,9,10,11,12, Michael Köpke13.   

Abstract

Many industrial chemicals that are produced from fossil resources could be manufactured more sustainably through fermentation. Here we describe the development of a carbon-negative fermentation route to producing the industrially important chemicals acetone and isopropanol from abundant, low-cost waste gas feedstocks, such as industrial emissions and syngas. Using a combinatorial pathway library approach, we first mined a historical industrial strain collection for superior enzymes that we used to engineer the autotrophic acetogen Clostridium autoethanogenum. Next, we used omics analysis, kinetic modeling and cell-free prototyping to optimize flux. Finally, we scaled-up our optimized strains for continuous production at rates of up to ~3 g/L/h and ~90% selectivity. Life cycle analysis confirmed a negative carbon footprint for the products. Unlike traditional production processes, which result in release of greenhouse gases, our process fixes carbon. These results show that engineered acetogens enable sustainable, high-efficiency, high-selectivity chemicals production. We expect that our approach can be readily adapted to a wide range of commodity chemicals.
© 2022. The Author(s), under exclusive licence to Springer Nature America, Inc.

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Year:  2022        PMID: 35190685     DOI: 10.1038/s41587-021-01195-w

Source DB:  PubMed          Journal:  Nat Biotechnol        ISSN: 1087-0156            Impact factor:   68.164


  62 in total

1.  Synthetic metabolic bypass for a metabolic toggle switch enhances acetyl-CoA supply for isopropanol production by Escherichia coli.

Authors:  Yuki Soma; Taiki Yamaji; Fumio Matsuda; Taizo Hanai
Journal:  J Biosci Bioeng       Date:  2017-02-14       Impact factor: 2.894

2.  CRISPR EnAbled Trackable genome Engineering for isopropanol production in Escherichia coli.

Authors:  Liya Liang; Rongming Liu; Andrew D Garst; Thomas Lee; Violeta Sànchez I Nogué; Gregg T Beckham; Ryan T Gill
Journal:  Metab Eng       Date:  2017-02-16       Impact factor: 9.783

Review 3.  Acetone-butanol fermentation revisited.

Authors:  D T Jones; D R Woods
Journal:  Microbiol Rev       Date:  1986-12

4.  Production of isopropanol by metabolically engineered Escherichia coli.

Authors:  Toru Jojima; Masayuki Inui; Hideaki Yukawa
Journal:  Appl Microbiol Biotechnol       Date:  2007-11-07       Impact factor: 4.813

5.  A modified pathway for the production of acetone in Escherichia coli.

Authors:  Antje May; Ralf-Jörg Fischer; Simone Maria Thum; Steffen Schaffer; Stefan Verseck; Peter Dürre; Hubert Bahl
Journal:  Metab Eng       Date:  2012-08-14       Impact factor: 9.783

6.  Purification and characterization of a primary-secondary alcohol dehydrogenase from two strains of Clostridium beijerinckii.

Authors:  A A Ismaiel; C X Zhu; G D Colby; J S Chen
Journal:  J Bacteriol       Date:  1993-08       Impact factor: 3.490

7.  Integration of chemical catalysis with extractive fermentation to produce fuels.

Authors:  Pazhamalai Anbarasan; Zachary C Baer; Sanil Sreekumar; Elad Gross; Joseph B Binder; Harvey W Blanch; Douglas S Clark; F Dean Toste
Journal:  Nature       Date:  2012-11-08       Impact factor: 49.962

8.  Engineered synthetic pathway for isopropanol production in Escherichia coli.

Authors:  T Hanai; S Atsumi; J C Liao
Journal:  Appl Environ Microbiol       Date:  2007-10-12       Impact factor: 4.792

9.  CO2 fixation by anaerobic non-photosynthetic mixotrophy for improved carbon conversion.

Authors:  Shawn W Jones; Alan G Fast; Ellinor D Carlson; Carrissa A Wiedel; Jennifer Au; Maciek R Antoniewicz; Eleftherios T Papoutsakis; Bryan P Tracy
Journal:  Nat Commun       Date:  2016-09-30       Impact factor: 14.919

10.  Inactivation of Severe Acute Respiratory Syndrome Coronavirus 2 by WHO-Recommended Hand Rub Formulations and Alcohols.

Authors:  Annika Kratzel; Daniel Todt; Philip V'kovski; Silvio Steiner; Mitra Gultom; Tran Thi Nhu Thao; Nadine Ebert; Melle Holwerda; Jörg Steinmann; Daniela Niemeyer; Ronald Dijkman; Günter Kampf; Christian Drosten; Eike Steinmann; Volker Thiel; Stephanie Pfaender
Journal:  Emerg Infect Dis       Date:  2020-06-21       Impact factor: 6.883

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  14 in total

1.  Spacer2PAM: A computational framework to guide experimental determination of functional CRISPR-Cas system PAM sequences.

Authors:  Grant A Rybnicky; Nicholas A Fackler; Ashty S Karim; Michael Köpke; Michael C Jewett
Journal:  Nucleic Acids Res       Date:  2022-04-08       Impact factor: 16.971

2.  The race to upcycle CO2 into fuels, concrete and more.

Authors:  Mark Peplow
Journal:  Nature       Date:  2022-03       Impact factor: 49.962

Review 3.  Reprogramming Microbial CO2-Metabolizing Chassis With CRISPR-Cas Systems.

Authors:  Hai-Yan Yu; Shu-Guang Wang; Peng-Fei Xia
Journal:  Front Bioeng Biotechnol       Date:  2022-06-23

4.  Metabolic engineering of Clostridium ljungdahlii for the production of hexanol and butanol from CO2 and H2.

Authors:  Ira Lauer; Gabriele Philipps; Stefan Jennewein
Journal:  Microb Cell Fact       Date:  2022-05-14       Impact factor: 6.352

5.  Turning waste gases into valuables.

Authors:  Huawei Zhu; Yin Li
Journal:  Synth Syst Biotechnol       Date:  2022-04-04

Review 6.  Engineering Acetogenic Bacteria for Efficient One-Carbon Utilization.

Authors:  Hyeonsik Lee; Jiyun Bae; Sangrak Jin; Seulgi Kang; Byung-Kwan Cho
Journal:  Front Microbiol       Date:  2022-05-09       Impact factor: 6.064

Review 7.  Microbial Utilization of Next-Generation Feedstocks for the Biomanufacturing of Value-Added Chemicals and Food Ingredients.

Authors:  Congqiang Zhang; Christoph Ottenheim; Melanie Weingarten; LiangHui Ji
Journal:  Front Bioeng Biotechnol       Date:  2022-04-11

8.  Engineered microbes: Making valuable chemicals from waste gases.

Authors:  Jian Li
Journal:  Synth Syst Biotechnol       Date:  2022-04-13

9.  Molecular biology for green recovery-A call for action.

Authors:  Marta Rodríguez-Martínez; Jens Nielsen; Sam Dupont; Jessica Vamathevan; Beverley J Glover; Lindsey C Crosswell; Brendan Rouse; Ben F Luisi; Chris Bowler; Susan M Gasser; Detlev Arendt; Tobias J Erb; Victor de Lorenzo; Edith Heard; Kiran Raosaheb Patil
Journal:  PLoS Biol       Date:  2022-04-22       Impact factor: 8.029

10.  Reverse β-oxidation pathways for efficient chemical production.

Authors:  Katia Tarasava; Seung Hwan Lee; Jing Chen; Michael Köpke; Michael C Jewett; Ramon Gonzalez
Journal:  J Ind Microbiol Biotechnol       Date:  2022-04-14       Impact factor: 4.258

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