| Literature DB >> 35190590 |
Martin Bicher1,2, Claire Rippinger3,4, Günter Schneckenreither3,4, Nadine Weibrecht5, Christoph Urach3,4, Melanie Zechmeister5, Dominik Brunmeir3,4, Wolfgang Huf6,7, Niki Popper3,4,5.
Abstract
Several systemic factors indicate that worldwide herd immunity against COVID-19 will probably not be achieved in 2021. On the one hand, vaccination programs are limited by availability of doses and on the other hand, the number of people already infected is still too low to have a disease preventing impact and new emerging variants of the virus seem to partially neglect developed antibodies from previous infections. Nevertheless, by February 2021 after one year of observing high numbers of reported COVID-19 cases in most European countries, we might expect that the immunization level should have an impact on the spread of SARS-CoV-2. Here we present an approach for estimating the immunization of the Austrian population and discuss potential consequences on herd immunity effects. To estimate immunization we use a calibrated agent-based simulation model that reproduces the actual COVID-19 pandemic in Austria. From the resulting synthetic individual-based data we can extract the number of immunized persons. We then extrapolate the progression of the epidemic by varying the obtained level of immunization in simulations of an hypothetical uncontrolled epidemic wave indicating potential effects on the effective reproduction number. We compared our theoretical findings with results derived from a classic differential equation SIR-model. As of February 2021, [Formula: see text] of the Austrian population has been affected by a SARS-CoV-2 infection which causes a [Formula: see text] reduction of the effective reproduction number and a [Formula: see text] reduction of the prevalence peak compared to a fully susceptible population. This estimation is now recomputed on a regular basis to publish model based analysis of immunization level in Austria also including the fast growing effects of vaccination programs. This provides substantial information for decision makers to evaluate the necessity of non pharmaceutical intervention measures based on the estimated impact of natural and vaccinated immunization.Entities:
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Year: 2022 PMID: 35190590 PMCID: PMC8861103 DOI: 10.1038/s41598-022-06771-x
Source DB: PubMed Journal: Sci Rep ISSN: 2045-2322 Impact factor: 4.379
Figure 1Disease path of an infected agent in the agent-based COVID-19 model. This chart shows an updated version of the one published in the supplemental material of[2].
Figure 2Calibrated model results for the active, past and daily new infections of SARS-CoV-2 from March 2020 until January 2021. Detected infections denote those people who have received a positive test result and are recorded in the official reporting system. The lower right plot displays a comparison between the calibrated model results and the officially reported case numbers.
Figure 3Active and past infections of SARS-CoV-2 for selected dates. Detected infections denote those people who have received a positive test result and are recorded in the official reporting system. The sum of active and past infections denotes the people who have been in contact with SARS-CoV-2 up to that date.
Figure 7Relative reduction of the effective reproduction number and the peak of the prevalence compared to a fully susceptible population for the results of the classic SIR-model and of the agent-based simulation model.
Figure 4Various outcome measures for scenarios with different initially immunization levels. Simulation results for all scenarios with varying immunization level and distribution of initially immune individuals are depicted. Panel A depicts the number of susceptible individuals and Panel B depicts the number of currently infected individuals. Panel C depicts the daily incidences for all cases of SARS-COV-2 infections and Panel D depicts the daily incidences for the confirmed SARS-COV-2 infections. For each timeline, the maximum of the curve is marked.
Figure 5Estimates of the effective reproduction number for different initial immunization level. The effective reproduction number has been evaluated both on the total new cases as well as on the detected new cases. In the lower plot, the evaluation based on all new cases has been shifted to account for the time delay between infection and detection date. The black dotted line indicates the date (2021-02-14) used for evaluation of and .
Figure 6Effective reproduction number and maximal prevalence as a function of initial immunization level for the results of the agent-based simulation.