| Literature DB >> 35186043 |
Lijun Li1, Wei Xiong2, Donghua Li1, Jiangang Cao3.
Abstract
Background: The interleukin10 (IL-10) gene polymorphisms have been indicated to be associated with breast cancer (BC) risk, but the findings are still controversial. To derive a more precise evaluation, we performed a comprehensive meta-analysis.Entities:
Keywords: breast cancer; gene polymorphism; interleukin-10; meta-analysis; species variation
Year: 2022 PMID: 35186043 PMCID: PMC8855208 DOI: 10.3389/fgene.2022.829283
Source DB: PubMed Journal: Front Genet ISSN: 1664-8021 Impact factor: 4.599
FIGURE 1Flowchart of study selection for the present study.
Characteristics of the studies included in the meta-analysis.
| First author | Year | Country | Ethnicity | Genotyping method | SOC | Case/control | Study design | SNP No. | NOS score | |
|---|---|---|---|---|---|---|---|---|---|---|
| Gallegos-Arreola | 2019 | Mexican | Mixed | PCR-RFLP | HB | 368/320 | CC | 3 | 8 | |
| Al-Ankoshy | 2019 | Iraq | Caucasian | PCR–SSP | HB | 70/70 | CC | 1 | 8 | |
| Zeng | 2019 | China | Asian | PCR-RFLP | HB | 208/215 | CC | 3 | 8 | |
| Sabet | 2017 | Egypt | Caucasian | PCR-RFLP | HB | 105/50 | CC | 1,2,3 | 7 | |
| Tian | 2017 | China | Asian | Mass ARRAY | PB | 312/312 | CC | 1,2,3 | 7 | |
| Maruthi | 2017 | India | Mixed | PCR-RFLP | HB | 285/285 | CC | 1 | 7 | |
| Atoum | 2016 | Jordan | Mixed | PCR-RFLP | HB | 202/210 | CC | 1,2,3 | 7 | |
| Alsuhaibani | 2016 | Egypt | Caucasian | PCR-RFLP | HB | 80/80 | CC | 1 | 7 | |
| Vinod | 2015 | India | Mixed | ASPCR | HB | 125/160 | CC | 1 | 8 | |
| Li | 2014 | China | Asian | PCR–SSP | PB | 128/128 | CC | 1,2 | 7 | |
| Wang | 2014 | China | Asian | PCR-RFLP | HB | 474/501 | CC | 2 | 8 | |
| Pooja | 2012 | India | Mixed | PCR-RFLP | PB | 200/200 | CC | 1,2,3 | 7 | |
| He | 2012 | China | Asian | MALDI-TOF MS | HB | 347/500 | CC | 2 | 7 | |
| Kong2010 | 2010 | China | Asian | PCR-RFLP | HB | 315/322 | CC | 1,2,3 | 7 | |
| Pharoah | 2007 | European | Caucasian | TaqMan | PB | 2045/2218 | CC | 3 | 8 | |
| Gonullu | 2007 | Turkey | Caucasian | Mass ARRAY | HB | 38/24 | CC | 1,2,3 | 7 | |
| Scola | 2006 | Italy | Caucasian | PCR-RFLP | HB | 84/106 | CC | 1,2,3 | 7 | |
| Onay | 2006 | Canada | Mixed | TaqMan | PB | 398/372 | CC | 1 | 8 | |
| Balasu bramanian | 2006 | United Kingdom | Caucasian | TaqMan | HB | 497/498 | CC | 1 | 7 | |
| Guzowski | 2005 | America | Mixed | DHPLC | HB | 50/25 | CC | 1,2,3 | 7 | |
| Langsenlehner | 2005 | Australia | Caucasian | TaqMan | PB | 500/496 | CC | 3 | 8 | |
| Abdolrahim | 2005 | Iran | Caucasian | PCR-RFLP | HB | 275/320 | CC | 1,2,3 | 8 | |
| Smith | 2004 | United Kingdom | Caucasian | ARMS-PCR | HB | 144/263 | CC | 1 | 8 | |
SOC, source of controls; HB: hospital-based; PB, population-based; CC, case–control; PCR, polymerase chain reaction; RFLP, restriction fragment length polymorphism; DHPLC, denaturing highperformance liquid chromatography; EPIC, European Prospective Investigation of Cancer (a prospective study of diet and cancer being carried out in nine European countries); ASPCR, allele-specific PCR; SNP, single-nucleotide polymorphisms; SNP No. 1, - 1082A > G (rs1800896); 2: - 819T > C (rs1800871); 3, - 592A > C (rs1800872); NOS, Newcastle-ottawa scale.
IL-10 polymorphisms genotype distribution and allele frequency in cases and controls.
| First author | Case | Control | Cases | Control | MAF | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Genotypes | Alleles | Genotypes | Alleles | ||||||||||
| -1082A > G rs1800896 | AA | AC | CC | A | C | AA | AC | CC | A | C | |||
|
| 202 | 210 | 157 | 29 | 16 | 343 | 61 | 151 | 42 | 17 | 344 | 76 | 0.181 |
|
| 80 | 80 | 16 | 47 | 17 | 79 | 81 | 14 | 50 | 16 | 78 | 82 | 0.512 |
|
| 125 | 160 | 76 | 31 | 18 | 183 | 67 | 67 | 78 | 15 | 212 | 108 | 0.337 |
|
| 200 | 200 | 132 | 60 | 8 | 324 | 76 | 145 | 50 | 5 | 34 | 60 | 0.638 |
|
| 315 | 322 | 285 | 29 | 1 | 599 | 31 | 285 | 35 | 2 | 605 | 39 | 0.061 |
|
| 38 | 24 | 13 | 22 | 3 | 48 | 28 | 16 | 7 | 1 | 39 | 9 | 0.187 |
|
| 50 | 25 | 10 | 28 | 12 | 48 | 52 | 9 | 12 | 4 | 30 | 20 | 0.400 |
|
| 105 | 50 | 15 | 41 | 49 | 71 | 139 | 27 | 21 | 2 | 75 | 25 | 0.250 |
|
| 312 | 312 | 51 | 132 | 129 | 234 | 390 | 27 | 154 | 131 | 208 | 416 | 0.666 |
|
| 275 | 320 | 119 | 116 | 40 | 171 | 373 | 146 | 125 | 49 | 417 | 223 | 0.348 |
|
| 84 | 106 | 28 | 40 | 16 | 96 | 72 | 40 | 45 | 21 | 125 | 87 | 0.410 |
|
| 398 | 372 | 90 | 205 | 103 | 385 | 411 | 107 | 194 | 71 | 408 | 336 | 0.451 |
|
| 497 | 498 | 121 | 253 | 123 | 499 | 495 | 117 | 260 | 121 | 494 | 502 | 0.504 |
|
| 285 | 285 | 80 | 146 | 59 | 262 | 308 | 89 | 159 | 37 | 234 | 336 | 0.589 |
|
| 70 | 70 | 36 | 10 | 24 | 97 | 43 | 16 | 17 | 37 | 44 | 96 | 0.690 |
|
| 144 | 263 | 32 | 58 | 39 | 136 | 122 | 46 | 120 | 57 | 250 | 276 | 0.524 |
|
| 128 | 128 | 96 | 30 | 2 | 222 | 34 | 80 | 44 | 4 | 204 | 52 | 0.203 |
| -819T > C (rs1800871) | TT | TC | CC | T | C | TT | TC | CC | T | C | |||
|
| 202 | 210 | 88 | 47 | 67 | 223 | 181 | 93 | 41 | 76 | 227 | 193 | 0.459 |
|
| 474 | 501 | 90 | 198 | 186 | 378 | 570 | 48 | 219 | 234 | 315 | 687 | 0.685 |
|
| 200 | 200 | 54 | 92 | 54 | 200 | 200 | 65 | 78 | 57 | 208 | 192 | 0.480 |
|
| 315 | 322 | 119 | 135 | 61 | 273 | 257 | 134 | 131 | 57 | 399 | 245 | 0.380 |
|
| 38 | 24 | 5 | 17 | 16 | 27 | 49 | 4 | 10 | 10 | 18 | 30 | 0.625 |
|
| 50 | 25 | 3 | 19 | 28 | 25 | 75 | 1 | 10 | 14 | 12 | 38 | 0.760 |
|
| 105 | 50 | 16 | 47 | 42 | 79 | 131 | 26 | 22 | 2 | 74 | 26 | 0.260 |
|
| 312 | 312 | 124 | 141 | 47 | 389 | 235 | 144 | 128 | 40 | 416 | 208 | 0.333 |
|
| 275 | 320 | 129 | 120 | 26 | 375 | 172 | 166 | 122 | 32 | 454 | 186 | 0.290 |
|
| 347 | 500 | 177 | 141 | 29 | 495 | 199 | 229 | 223 | 44 | 681 | 311 | 0.313 |
|
| 84 | 106 | 5 | 30 | 49 | 40 | 128 | 12 | 35 | 59 | 59 | 177 | 0.721 |
|
| 128 | 128 | 105 | 22 | 1 | 232 | 23 | 96 | 28 | 4 | 220 | 36 | 0.203 |
| -592C > A (rs1800872) | AA | AC | CC | A | C | AA | AC | CC | A | C | |||
|
| 368 | 320 | 42 | 154 | 172 | 238 | 498 | 11 | 100 | 209 | 122 | 518 | 0.190 |
|
| 208 | 215 | 10 | 88 | 110 | 108 | 308 | 22 | 95 | 98 | 139 | 291 | 0.323 |
|
| 202 | 210 | 76 | 84 | 42 | 236 | 168 | 79 | 91 | 40 | 249 | 171 | 0.593 |
|
| 200 | 200 | 45 | 67 | 88 | 157 | 243 | 38 | 84 | 78 | 160 | 240 | 0.400 |
|
| 315 | 322 | 119 | 135 | 61 | 373 | 257 | 134 | 131 | 57 | 399 | 245 | 0.620 |
|
| 38 | 24 | 5 | 17 | 16 | 27 | 49 | 4 | 10 | 10 | 18 | 30 | 0.375 |
|
| 50 | 25 | 3 | 17 | 30 | 23 | 77 | 3 | 10 | 12 | 16 | 34 | 0.320 |
|
| 500 | 496 | 21 | 210 | 269 | 252 | 748 | 36 | 199 | 261 | 271 | 721 | 0.273 |
|
| 105 | 50 | 4 | 36 | 65 | 42 | 166 | 31 | 16 | 6 | 78 | 28 | 0.736 |
|
| 312 | 312 | 131 | 130 | 51 | 392 | 232 | 141 | 127 | 44 | 409 | 215 | 0.655 |
|
| 275 | 320 | 27 | 100 | 148 | 154 | 396 | 29 | 132 | 159 | 190 | 450 | 0.297 |
|
| 84 | 106 | 5 | 30 | 49 | 40 | 128 | 12 | 35 | 59 | 59 | 153 | 0.278 |
|
| 2045 | 218 | 116 | 679 | 1,251 | 367 | 3,181 | 116 | 764 | 1,338 | 996 | 3,440 | 0.225 |
MAFs: minor allele frequencies.
Results of the association of IL-10 polymorphisms with BC risk.
| Subgroup | Genetic model | Type of model | Heterogeneity | Odds Ratio | ||||
|---|---|---|---|---|---|---|---|---|
| I2 (%) | PH | OR | 95% CI | Z test | POR | |||
|
| ||||||||
| Overall | G vs. A | Random | 82 | <0.00001 | 1.06 | 0.87–1.28 | 0.56 | 0.57 |
| GG vs. AA | Random | 71 | <0.00001 | 1.14 | 0.81–1.59 | 0.73 | 0.46 | |
| GA vs. AA | Random | 73 | <0.00001 | 0.91 | 0.71–1.17 | 0.74 | 0.46 | |
| GG + GA vs. AA | Random | 79 | <0.00001 | 0.99 | 0.76–1.28 | 0.11 | 0.92 | |
| GG vs. GA + AA | Random | 53 | 0.006 | 1.18 | 0.94–1.48 | 1.45 | 0.15 | |
| Ethnicity | ||||||||
| Asian | G vs. A | Fixed | 0 | 0.47 | 0.78 | 0.65–0.95 | 2.49 |
|
| GG vs. AA | Fixed | 0 | 0.97 | 0.51 | 0.31–0.84 | 2.68 |
| |
| GA vs. AA | Fixed | 24 | 0.27 | 0.6 | 0.44–0.81 | 3.31 |
| |
| GG + GA vs. AA | Fixed | 6 | 0.34 | 0.6 | 0.45–0.81 | 3.39 |
| |
| GG vs. GA + AA | Fixed | 0 | 0.66 | 0.94 | 0.69–1.28 | 0.39 | 0.7 | |
| Caucasian | G vs. A | Random | 0.0089 | <0.00001 | 1.19 | 0.83–1.72 | 0.94 | 0.35 |
| GG vs. AA | Random | 0.008 | 0.00001 | 1.21 | 0.67–2.16 | 0.63 | 0.53 | |
| GA vs. AA | Random | 72 | 0.0008 | 1.09 | 0.73–1.62 | 0.43 | 0.67 | |
| GG + GA vs. AA | Random | 84 | <0.00001 | 1.19 | 0.74–1.91 | 0.7 | 0.48 | |
| GG vs. GA + AA | Random | 70 | 0.002 | 1.14 | 0.75–1.72 | 0.61 | 0.55 | |
|
| ||||||||
| Overall | C vs. T | Random | 84 | <0.00001 | 1.11 | 088–1.39 | 0.87 | 0.39 |
| CC vs. TT | Random | 75 | <0.00001 | 1.12 | 0.75–1.66 | 0.55 | 0.58 | |
| CT vs. TT | Random | 67 | 0.0004 | 1.11 | 0.85–1.44 | 0.77 | 0.44 | |
| CC + CT vs. TT | Random | 78 | <0.00001 | 1.12 | 0.84–1.50 | 0.77 | 0.44 | |
| CC vs. CT + TT | Random | 50 | 0.03 | 1 | 0.80–1.25 | 0.02 | 0.98 | |
| Ethnicity | ||||||||
| Asian | C vs. T | Random | 89 | <0.00001 | 0.94 | 0.68–1.31 | 0.35 | 0.72 |
| CC vs. TT | Random | 79 | 0.0008 | 0.81 | 0.48–1.40 | 0.74 | 0.46 | |
| CT vs. TT | Random | 76 | 0.002 | 0.86 | 0.61–1.21 | 0.88 | 0.38 | |
| CC + CT vs. TT | Random | 82 | 0.0001 | 0.84 | 0.58–1.22 | 0.93 | 0.35 | |
| CC vs. CT + TT | Random | 38 | 0.17 | 0.93 | 0.72–1.20 | 0.59 | 0.56 | |
| Caucasian | C vs. T | Random | 88 | <0.0001 | 1.57 | 0.81–3.05 | 1.33 | 0.18 |
| CC vs. TT | Random | 84 | 0.0004 | 1.11 | 0.85–1.44 | 0.77 | 0.44 | |
| CT vs. TT | Random | 45 | 0.14 | 1.8 | 1.03–3.13 | 2.07 |
| |
| CC + CT vs. TT | Random | 79 | 0.002 | 2.13 | 0.89–5.13 | 1.69 | 0.09 | |
| CC vs. CT + TT | Random | 78 | 0.003 | 1.64 | 0.69–3.90 | 1.12 | 0.26 | |
|
| ||||||||
| Overall | A vs. C | Random | 89 | <0.00001 | 0.82 | 0.66–1.03 | 1.7 | 0.09 |
| AA vs. CC | Random | 83 | <0.00001 | 0.71 | 0.46–1.08 | 1.6 | 0.11 | |
| AC vs. CC | Random | 59 | 0.004 | 0.93 | 0.78–1.11 | 0.8 | 0.43 | |
| AA + AC vs. CC | Random | 79 | 0.00001 | 0.86 | 0.68–1.08 | 1.31 | 0.19 | |
| AA vs. AC + CC | Random | 60 | 0.004 | 0.95 | 0.75–1.20 | 0.44 | 0.66 | |
| Ethnicity | ||||||||
| Asian | A vs. C | Fixed | 0 | 0.54 | 0.85 | 0.74–0.98 | 2.22 |
|
| AA vs. CC | Fixed | 23 | 0.27 | 0.74 | 0.55–0.99 | 2.04 |
| |
| AC vs. CC | Fixed | 0 | 0.88 | 0.88 | 0.69–1.13 | 0.96 | 0.34 | |
| AA + AC vs. CC | Fixed | 0 | 0.81 | 0.82 | 0.65–1.04 | 1.65 | 0.1 | |
| AA vs. AC + CC | Fixed | 25 | 0.26 | 0.82 | 0.66–1.01 | 1.84 | 0.07 | |
| Caucasian | A vs. C | Random | 93 | <0.00001 | 0.65 | 0.43–0.98 | 2.07 |
|
| AA vs. CC | Random | 89 | <0.00001 | 0.43 | 0.19–1.00 | 1.96 | 0.05 | |
| AC vs. CC | Random | 48 | 0.09 | 0.89 | 0.72–1.11 | 1.02 | 0.31 | |
| AA + AC vs. CC | Random | 82 | <0.00001 | 0.74 | 0.52–1.05 | 1.69 | 0.09 | |
| AA vs. AC + CC | Random | 36 | 0.18 | 0.87 | 0.62–1.21 | 0.84 | 0.4 | |
OR, odds ratio; PH, p value of Heterogeneity; CI, confidence intervals; POR, p value of odds ratio. p value, significant at <0.05. Bold numbers denote statistical significance.
FIGURE 2Forest plots showed a significant association of IL-10 rs1800896 polymorphism and breast cancer risk in Asians. (A) (allele model: G vs. A); (B) (homozygous model: GG vs. AA); (C) (heterozygous model: GA vs. AA); (D) (dominant model: GG + GA vs. AA). The squares and horizontal lines correspond to the study-specific odds ratio (OR) and 95% confidence interval (CI). The area of the squares reflects the weight (inverse of the variance). The diamond represents the summary OR and 95% CI.
FIGURE 5Begg’s and Egger’s funnel plots of IL-10 gene polymorphism and breast cancer risk for publication bias test. (A) rs1800896; (B) rs1800871; (C) rs1800872.
FIGURE 3Forest plots showed a significant association of IL-10 rs1800871 polymorphism and breast cancer risk in the Caucasians (heterozygous model: CT vs. TT). The squares and horizontal lines correspond to the study-specific odds ratio (OR) and 95% confidence interval (CI). The area of the squares reflects the weight (inverse of the variance). The diamond represents the summary OR and 95% CI.
FIGURE 4Forest plots showed a significant association of IL-10 rs1800872 polymorphism and breast cancer risk in Asians and Caucasians. (A) IL-10 rs1800872 polymorphism in Asians (homozygous model: AA vs. CC); (B) IL-10 rs1800872 polymorphism in Asians (allele model: A vs. C); (C) IL-10 rs1800872 polymorphism in Caucasians (allele model: A vs. C). The squares and horizontal lines correspond to the study-specific odds ratio (OR) and 95% confidence interval (CI). The area of the squares reflects the weight (inverse of the variance). The diamond represents the summary OR and 95% CI.