| Literature DB >> 35173163 |
Paige Van de Vuurst1, M Mónica Díaz2, Annia Rodríguez-San Pedro3, Juan Luis Allendes4, Natalie Brown5, Juan David Gutiérrez6, Heliot Zarza7, Stefan V de Oliveira8, Elsa Cárdenas-Canales9, Rubén M Barquez10, Luis E Escobar11,12,13.
Abstract
The common vampire bat (Desmodus rotundus) is a sanguivorous (i.e., blood-eating) bat species distributed in the Americas from northern Mexico southwards to central Chile and Argentina. Desmodus rotundus is one of only three mammal species known to feed exclusively on blood, mainly from domestic mammals, although large wildlife and occasionally humans can also serve as a food source. Blood feeding makes D. rotundus an effective transmissor of pathogens to its prey. Consequently, this species is a common target of culling efforts by various individuals and organizations. Nevertheless, little is known about the historical distribution of D. rotundus. Detailed occurrence data are critical for the accurate assessment of past and current distributions of D. rotundus as part of ecological, biogeographical, and epidemiological research. This article presents a dataset of D. rotundus historical occurrence reports, including >39,000 locality reports across the Americas to facilitate the development of spatiotemporal studies of the species. Data are available at https://doi.org/10.6084/m9.figshare.15025296 .Entities:
Mesh:
Year: 2022 PMID: 35173163 PMCID: PMC8850563 DOI: 10.1038/s41597-022-01140-9
Source DB: PubMed Journal: Sci Data ISSN: 2052-4463 Impact factor: 6.444
Fig. 1Dataset Workflow. Visual representation of the data curation, formatting, technical validation, and quality control process of this dataset of Desmodus rotundus occurrence reports. 1) Red: the data were first collected from various sources, including public data repositories, natural history museums and institutions, individual contributors, and published scientific literature. These data were formatted to meet Darwin Core archive standards. 2) Blue: the formatted data were then examined for error and underwent the technical validation process where reports which did not meet inclusion criteria were removed (see Technical Validation section). 3) Green: the data were manually examined again after the technical validation process for quality and to detect any remaining errors. This process was repeated as new D. rotundus occurrence reports were collected (dashed arrow). The final dataset was published at the end of this repeated validation and quality check process and is accessible from: 10.6084/m9.figshare.15025296.
Fig. 2Map of occurrence report locations. Geographic locations of all occurrence reports in the final Desmodus rotundus dataset (red points) representing 7576 unique geographic locations available from the 39120 original reports. Inset: number of reports by sex in the final dataset (red bars) showing more reports of male individuals than females.
Fig. 3Data distribution by country and year. (a) The number of occurrence reports in the final Desmodus rotundus dataset is summarized based on the country in which the report occurred. The country with the most recorded occurrences was Mexico (n = 7653), followed by Colombia, Peru, and Argentina, which contributed over 2000 D. rotundus occurrence reports each. (b) Number of occurrence reports in the final D . rotundus dataset shown based on the year in which D. rotundus were recorded.
Data and metadata definitions.
| Column Header | Definition |
|---|---|
| scientificName | Full scientific name and lowest level of taxonomic rank. |
| kingdom | The full scientific name of the kingdom in which the taxon is classified. |
| decimalLongitude | The geographic longitude (in decimal degrees, using the spatial reference system given in geodeticDatum) of the geographic center of Location. Positive values are east of the Greenwich Meridian, and negative values are west of it. Legal values lie between −180 and 180, inclusive. |
| decimalLatitude | The geographic latitude (in decimal degrees, using the spatial reference system given in geodeticDatum) of the geographic center of Location. Positive values are north of the Equator, and negative values are south of it. |
| geodeticDatum | The ellipsoid, geodetic datum, or spatial reference system (SRS) upon which the geographic coordinates are given in decimalLatitude and decimalLongitude as based. |
| countryCode | The standard code for the country in which the occurrence location occurs. |
| elevationInMeters | The elevation of the Location measured in meters (m). |
| individualCount | The number of individuals represented present at the time of the occurrence. |
| institutionID | An identifier for the institution having custody of the object(s) or information referred to in the record. The identifier used by the originating source of the occurrence. |
| family | The full scientific name of the family in which the taxon is classified. |
| taxonRank | The taxonomic rank of the most specific name in the scientificName. |
| coorditeUncertaintyInMeters | The horizontal distance (in meters) from the given decimalLatitude and decimalLongitude describing the smallest circle containing the whole of the Location. |
| stateProvince | The name of the next smaller administrative region than country (state, province, canton, department, region, etc.) in which the Location occurs. |
| locality | The specific description of the place the occurrence was reported. The lowest or most detailed level of geographic information. |
| year | The four-digit year in which the occurrence record occurred, according to the Common Era Calendar. |
| month | The integer month in which the occurrence record occurred. |
| day | The integer day of the month in which the occurrence record occurred. |
| basisOfRecord | The specific nature of the data record. The evidence on which the occurrence is based. |
| institutionCode | The name (or acronym) in use by the institution having custody of the object(s) or information referred to in the record. |
| datasetName | The name identifying the data set from which the record was derived. |
| Reference | Identifiers (publication, bibliographic reference, global unique identifier, URI) of literature associated with the occurrence. |
| sex | The sex of the biological individual(s) is represented in the occurrence. M = male, F = female. |
| lifeStage | The age class or life stage of the biological individual(s) at the time the occurrence was recorded. |
The following table provides standardized descriptions of each occurrence metadata based on the Darwin Core archive format[51]. Each piece of metadata for each occurrence is organized and recorded under the listed column headers.
Literary or published sources of occurrences.
| Reference or Source | Number of Occurrence Reports |
|---|---|
| Abundes-Gallegos, J., Salas-Rojas, M., Galvez-Romero, G., Perea-Martinez, L., Obregon-Morales, C. Y., Morales-Malacara, J. B. & Nogueda-Torres, B. (2018). Detection of dengue virus in bat flies (Diptera: Streblidae) of common vampire bats, | 1 |
| Aguiar, L., Brito, D., & Machado, R. B. (2010). Do current vampire bat ( | 1 |
| Aguirre, L. F. (2002). Structure of a Neotropical savanna bat community. Journal of Mammalogy, 83(3), 775–784. | 1 |
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| Almeida, E. O., Moreira, E. C., & Herrmann, G. P. (2002). Combat of | 3 |
| Alurralde, S. G., Barquez, R. M., & Diaz, M. M. (2017). New records of bats (Mammalia: Chiroptera) for a southern locality of the Argentine Yungas. Check List, 13(3), 2105. | 3 |
| Alviz, A. (2019). Fauna y Flora de Cinaruco - 2014–2016. v2.1. Parques Nacionales Naturales de Colombia. Dataset/Occurrence. | 8 |
| Andrade, F. A., Franta,. S., Souza, V. P., Barreto, M. S., & Fernandes, M. E. (2015). Spatial and temporal analysis of attacks by common vampire bats ( | 1 |
| Anthony, S.J., Ojeda-Flores, R., Rico-Chávez, O., Navarrete-Macias, I., Zambrana-Torrelio, C.M., Rostal, M.K., Epstein, J.H., Tipps, T., Liang, E., Sanchez-Leon, M., Sotomayor-Bonilla, J., Aguirre, A.A., Ávila-Flores, R., Medellín, R.A., Goldstein, T., Suzán, G., Daszak, P., & Lipkin, W.I. (2013). Coronaviruses in bats from Mexico. The Journal of General Virology, 94(5), 1028. | 1 |
| Aragon, G., & Aguirre, M. (2014). Distribucion de murcielagos (Chiroptera) de la Region Tacna, Peru. Idesia, 32(1), 119–127. | 1 |
| Argibay, H.D., Orozco, M.M., Cardinal, M.V., Rinas, M.A., Arnaiz, M., Segura, C.M., Gurtler, R.E. (2016) First finding of Trypanosoma cruzi II in vampire bats from a district free of domestic vector-borne transmission in Northeastern Argentina. Parasitology. 143(11),1358–1368. | 2 |
| Asociación Becarios de Casanare - ABC (2009). Mamíferos laguna El Tinije, 58 records, provided by Ramírez, B. (Publisher, Resource Creator, Metadata Provider), Rodríguez, M. (Author), On line, | 1 |
| Asprilla-Aguilar, A. A., Mantilla-Meluk, H., & Ortega, A. M. J. (2007). Analysis of the non-hematophagous bat species captured within the plan of eradication of | 4 |
| Avila-Gomez, E.S., Moreno, C.E., Garcia-Morales, R., Zuria, I., Sanchez-Rojas, G., Briones-Salas, M. (2015). Deforestation thresholds for phyllostomid bat populations in tropical landscapes in the Huasteca region, Mexico. Tropical Conservation Science. 8 (3), 646–661. | 5 |
| Bahlman, J. W., & Kelt, D. A. (2007). Use of olfaction during prey location by the common vampire bat ( | 1 |
| Bakker, K.M., Rocke, T.E., Osorio, J.E. | 1 |
| Bakker, K.M., Rocke, T.E., Osorio, J.E., Abbott, R.C., Tello, C., Carrera, J.E., Valderrama, W., Shiva, C., Falcon, N., Streicker, D.G. (2019) Fluorescent biomarkers demonstrate prospects for spreadable vaccines to control disease transmission in wild bats. Nature Ecology and Evolution, 3(12), 1697–1704. | 1777 |
| Ballados-González, G. G., S. Sánchez-Montes, D. Romero-Salas, P. Colunga-Salas, R. Gutiérrez-Molina, L. León-Paniagua, I. Becker, M. L. Méndez-Ojeda, C. Barrientos-Salcedo, R. Serna-Lagunes, A. Cruz-Romero. 2018. Detection of pathogenic | 2 |
| Barrera Zambrano, V.A. (2017). Inventarios de flora y fauna en el piedemonte de los municipios Aguazul, Tauramena y Yopal del departamento de Casanare. v1.2. Asociación de Becarios del Casanare - ABC. Dataset/Occurrence. | 9 |
| Barrera Zambrano, V.A. (2018). Inventario y evaluación de fauna silvestre en el campo de exploración petrolera Niscota Sur. v2.1. Asociación de Becarios del Casanare - ABC. Dataset/Occurrence. | 2 |
| Barrera Zambrano, V.A. (2018). Línea base del medio biótico en los bosques dentro de la zona propuesta para Acuerdos de Conservación Voluntaria en la microcuenca de la Quebrada Aguazula - Rincón del Soldado Yopal. v2.0. Asociación de Becarios del Casanare - ABC. Dataset/Occurrence. | 3 |
| Barrera Zambrano, V.A. (2018): Línea base del medio biótico en los bosques para Acuerdos de Conservación Voluntaria en la microcuenca de la Quebrada Aguablanca El Morro Yopal. v2.2. Asociación de Becarios del Casanare - ABC. Dataset/Occurrence. | 6 |
| Barros, M. A. S., Morais Martins Gomes,C., Braga Figueiredo B. M., de Moura Júnior G. B., Fernandes dos Santos Ribeiro F., Marques Almeida Pessoa D., Ito F., & Bernard E.. (2017). Bats (Mammalia, Chiroptera) from the Nísia Floresta National Forest, with new records for the state of Rio Grande do Norte, northeastern Brazil. Biota Neotropica, 17(2), e20170351. | 1 |
| Becker, D.J., Bergner, L.M., Bentz A.B., Orton R.J., Altizer S., | 9 |
| Becker, D. J., Czirják, G. Á., Volokhov, D. V., Bentz, A. B., Carrera, J. E., Camus, M. S., Navara, K. J., Chizhikov, V. E., Fenton, M. B., Simmons, N. B., Recuenco, S. E., Gilbert, A. T., Altizer, S., & Streicker, D. G. (2018). Livestock abundance predicts vampire bat demography, immune profiles and bacterial infection risk. Philosophical transactions of the Royal Society of London. Series B, Biological sciences, 373(1745), 20170089. | 10 |
| Becker, D.J., Nachtmann, C., Argibay, H.D., Botto, G., Escalera-Zamudio, M., Carrera, J.E., Tello, C., Winiarski, E., Greenwood, A.D., Mendez-Ojeda, M.L., Loza-Rubio, E., Lavergne, A., de Thoisy, B., Czirjak, G.A., Plowright, R.K., Altizer, S., Streicker, D.G. (2019). Leukocyte profiles reflect geographic range limits in a widespread neotropical bat. Integrative and Comparative Biology, 59(5),1176–1189. | 33 |
| Bejarano-Bonilla, D. A., Yate-Rivas, Alexander & Bernal-Bautista, M. H. (2007). Bat diversity and distribution along an altitudinal transect in the Tolima region of Colombia. Caldasia, 29(2), 297–308. | 1 |
| Bergner, L.M., Orton, R.J., Benavides, J.A., Becker, D.J., Tello, C., Biek, R., & Streicker, D.G. (2020). Demographic and environmental drivers of metagenomic viral diversity in vampire bats. Molecular Ecology, 29, 6–39. | 8 |
| Bernard, E. (2001). Species list of bats (Mammalia, Chiroptera) of Santarem area, Para state, Brazil. Revista Brasileira de Zoologia, 18(2), 455–463. | 1 |
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| Bichuette, ME; Gimenez, ED; Arnone, IS; & Trajano, E (2018) An important site for conservation of bats in Brazil: Passa Tres cave, Sao Domingos karst area, with an updated checklist for Distrito Federal (DF) and Goias state. Subterranean Biology, 28, 39–51. | 1 |
| Bobrowiec, P. E. D., Lemes, M. R., & Gribel, R. (2015). Prey preference of the common vampire bat ( | 3 |
| Bolívar‐Cimé, B., Cuxim‐Koyoc, A., Reyes‐Novelo, E., Morales‐Malacara, J.B., Laborde, J. and Flores‐Peredo, R. (2018), Habitat fragmentation and the prevalence of parasites (Diptera, Streblidae) on three Phyllostomid bat species. Biotropica, 50, 90–97. | 2 |
| Bruna da Silva, X., Carvalho, W.D., Dias, D., Tabosa, L.O., Santos, C., & Esbérard, C.E.L. (2018). Bat richness (Mammalia: Chiroptera) in an area of montane Atlantic Forest in the Serra da Mantiqueira, state of Minas Gerais, southeast Brazil. Biota Neotropica, 18(2), e20170496. | 1 |
| Camargo, A., Olivera, R., Santiago, M., &González, J. (2018). Genetic relatedness of Desmodus rotundus from northern Uruguay with populations from the remainder of its distribution range. | 1 |
| Carrillo-Araujo, M., Tas, N., Alcantara-Hernandez, R.J., Gaona, O., Schondube, J.E., Medellin, R.A., Jansson, J.K., &Falcon, L.I. (2015) Phyllostomid bat microbiome composition is associated to host phylogeny and feeding strategies. Frontiers in Microbiology, 6, 447. | 1 |
| Carter, G.G., Farine, D.R., Crisp, R.J., Vrtilek, J.K., Ripperger, S.P., &Page, R.A., Development of new food-sharing relationships in vampire bats. Current Biology, 30(7), 307–309. | 2 |
| Castilla, C. M., Torres, R., and Díaz, M. M. (2013). Murciélagos de la provincia de Córdoba, Argentina: riqueza y distribución. Mastozoología Neotropical, 20(2), 243–254. | 12 |
| Castilla, M. C. (2018). Diagnóstico etno-zoológico y biogeográfico del ensamble de murciélagos del dique de escaba: Implicancias para su conservación. Ph.D. Thesis. Universidad Nacional de Córdoba. | 14 |
| 11 | |
| Castillo, L.S., Cardona, D. (2018). Registro de murciélagos del Cañón del Chicamocha, Santander (2013–2014). v1.0. Fundación Chimbilako. Dataset/Occurrence. | 3 |
| Castro M.M., Kim B., Hill E., Fialho M.C., Puga L.C., Freitas M.B., Breton S., Machado-Neves M. (2017). The expression patterns of aquaporin 9, vacuolar H+-ATPase, and cytokeratin 5 in the epididymis of the common vampire bat. Histochemistry Cell Biology. 147(1), 39–48. | 1 |
| Cavelier Franco, I. (2020). Proyecto COL88611 para la conservación y uso sostenible de ecosistemas secos. v2.1. Patrimonio Natural Fondo para la Biodiversidad y Áreas Protegidas Patrimonio Natural. Dataset/Occurrence. | 48 |
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| • de Castro, Mariana Moraes, Wagner Gonzaga Gontalves, Stephanie Assef Millen Valente Teixeira, Maria do Carmo Queiroz Fialho, Felipe Couto Santos, Jerusa Maria Oliveira, Jose Eduardo Serrio, and Mariana Machado-Neves. (2017). Ultrastructure and morphometric features of epididymal epithelium in | 1 |
| Delpietro, H.A., Russo, R.G., Carter, G.G., Lord, R.D., & Delpietro, G.L. (2017). Reproductive seasonality, sex ratio and philopatry in Argentina’s common vampire bats. Royal Society Open Science, 4, e160959 | 1617 |
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| Rick, A. M. (1968). Notes on bats from Tikal, Guatemala. Journal of Mammalogy, 49(3), 516–520. | 1 |
| Ripperger, S., Carter, G., Duba, N., Koelpin, A., Cassens, B., Kapitza, R., Josic, D., Berrio-Martinez, J., Page, R.A., Mayer, F. (2019). Vampire Bats that cooperate in the lab maintain their social networks in the wild. Current Biology, 29(23), 4139–4144. | 2 |
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| Romero-Barrera, C., Osorio-Rodriguez, A., & Juárez-Agis, A. (2021). Distribución, abundancia, control y registros de casos de murciélagos vampiro, | 178 |
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| Wray, A.K., Olival, K.J., Moran, D., Lopez, M.R., Alvarez, D., Navarrete-Macias, I., Liang, E., Simmons, N.B., Lipkin, W.I., Daszak, P., Anthony, S.J. (2016). Viral diversity, prey preference, and bartonella prevalence in | 5 |
| Zarza, H., Martinez-Meyer, E., Suzan, G., Ceballos, G. 2017. Geographic distribution of | 1061 |
The following table lists (alphabetically) the literary and published sources of Desmodus rotundus occurrence reports not from publicly available data reservoirs. The references are verbatim (as initially listed by the source) and therefore may not all follow the same citation format. Note that number of occurrences is based on location, not the number of individuals reported at each location if more than one individual was reported.
Individual contributors.
| Source | Number of Occurrences in Final Dataset |
|---|---|
| Asociacion de Becarios del Casanare | 54 |
| Asociacion para el estudio y conservacion de las aves acuaticas en Colombia - Calidris | 2 |
| Colección Mamíferos Lillo (CML), Universidad Nacional de Tucumán, Argentina | 173 |
| Colegio de La Frontera Sur (ECOSUR) in Mexico and the University of San Carlos in Guatemala | 41 |
| Colegio de La Frontera Sur (ECOSUR) of Mexico | 37 |
| Corporacion Paisajes Rurales | 4 |
| CRC - Corporacion Autonoma Regional del Valle del Cauca | 2 |
| Daniel G. Streicker. Institute of Biodiversity, Animal Health and Comparative Medicine, College of Medical Veterinary and Life Sciences, University of Glasgow, UK. | 55 |
| El Servicio Nacional de Sanidad, Inocuidad y Calidad Agroalimentaria (SENASICA) | 929 |
| Elsa Cárdenas-Canales. Department of Pathobiological Sciences, School of Veterinary Medicine, University of Wisconsin-Madison, USA | 8 |
| Fundacion Chimbilako | 3 |
| Fundacion Humedales | 1 |
| Fundacion Omacha | 3 |
| INERCO Consultora Colombia | 1 |
| Instituto Amazonico de Investigaciones Cientãficas - SINCHI | 18 |
| Instituto de Investigacion de Recursos Biolãgicos Alexander von Humboldt | 191 |
| Instituto de Investigaciones Ambientales del Pacifico John Von Neumann - IIAP | 5 |
| Isagen S.A.S. Institute of Colombia | 2 |
| Museo Argentino de Ciencias Naturales (MACN) “Bernardino Rivadavia” de Buenos Aires. | 85 |
| Museo La Salle (MLS) Bogotá, Colombia. | 38 |
| Museo Provincial de Ciencias Naturales “Florentino Ameghino” (MFA-ZV-M), Santa Fe, La Capital | 3 |
| Museo Provincial de Ciencias Naturales (MG-ZV-M), Rosario, Santa Fe | 1 |
| Natural History Museum, Universidad Nacional Mayor de San Marcos, Peru | 467 |
| Naturalista Colombia | 4 |
| Parques Nacionales Naturales de Colombia | 10 |
| Patrimonio Natural Fondo para la Biodiversidad y Areas Protegidas “Patrimonio Natural” | 48 |
| Programa para la Conservación de los Murciélagos de Chile (PCMCh) | 334 |
| Ruben Barquez and Monica Diaz. Programa de Investigaciones de Biodiversidad Argentina. Facultad de Ciencias Naturales e Instituto Miguel Lillo. Universidad Nacional de Tucumán. Consejo Nacional de Investigaciones Científicas y Técnicas. Tucumán, Argentina | 213 |
| Universidad de Antioquia | 3 |
| Universidad de Caldas | 31 |
| Universidad de la Amazonia | 2 |
| Universidad de Pamplona | 1 |
| Universidad del Valle | 3 |
| Universidad Industrial de Santander | 11 |
| Universidad Nacional de Colombia | 171 |
| Universidad Tecnologica del Choco | 29 |
| Universidade Federal de Uberlândia | 133 |
Individuals and institutions that contributed to the dataset and the number of occurrence reports included in the final dataset.
| Measurement(s) | occurrence report |
| Technology Type(s) | digital curation |
| Sample Characteristic - Organism | Desmodus rotundus |
| Sample Characteristic - Location | North America • South America |