Literature DB >> 35168791

Multiplexed quantitative neuropeptidomics via DiLeu isobaric tagging.

Christopher S Sauer1, Lingjun Li2.   

Abstract

Neuropeptides are key signaling molecules in many pathways and can serve as potential biomarkers or therapeutics. Mass spectrometry has emerged as a powerful tool for studying neuropeptides with high sensitivity and accuracy. Isobaric tagging can further enhance this method by improving throughput and reducing sampling needs. In this chapter, we discuss the benefits and limitations of using isobaric tags to analyze neuropeptides. Methods for optimizing the data acquisition are also presented to enable a greater number of neuropeptides to be identified and quantified when using isobaric tags, specifically N,N-dimethyl leucine (DiLeu).
Copyright © 2022 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Data-dependent acquisition; DiLeu; Isobaric labeling; Mass spectrometry; Neuropeptides; Optimization

Mesh:

Substances:

Year:  2021        PMID: 35168791      PMCID: PMC9055872          DOI: 10.1016/bs.mie.2021.10.011

Source DB:  PubMed          Journal:  Methods Enzymol        ISSN: 0076-6879            Impact factor:   1.682


  35 in total

1.  Multifaceted Mass Spectrometric Investigation of Neuropeptide Changes in Atlantic Blue Crab, Callinectes sapidus, in Response to Low pH Stress.

Authors:  Yang Liu; Amanda R Buchberger; Kellen DeLaney; Zihui Li; Lingjun Li
Journal:  J Proteome Res       Date:  2019-06-10       Impact factor: 4.466

2.  Protein labeling by iTRAQ: a new tool for quantitative mass spectrometry in proteome research.

Authors:  Sebastian Wiese; Kai A Reidegeld; Helmut E Meyer; Bettina Warscheid
Journal:  Proteomics       Date:  2007-02       Impact factor: 3.984

Review 3.  The Taguchi methodology as a statistical tool for biotechnological applications: a critical appraisal.

Authors:  Ravella Sreenivas Rao; C Ganesh Kumar; R Shetty Prakasham; Phil J Hobbs
Journal:  Biotechnol J       Date:  2008-04       Impact factor: 4.677

4.  Factorial experimental designs elucidate significant variables affecting data acquisition on a quadrupole Orbitrap mass spectrometer.

Authors:  Shan M Randall; Helene L Cardasis; David C Muddiman
Journal:  J Am Soc Mass Spectrom       Date:  2013-08-03       Impact factor: 3.109

5.  Identification, Quantitation, and Imaging of the Crustacean Peptidome.

Authors:  Kellen DeLaney; Amanda Buchberger; Lingjun Li
Journal:  Methods Mol Biol       Date:  2018

Review 6.  Peptidomics for the discovery and characterization of neuropeptides and hormones.

Authors:  Elena V Romanova; Jonathan V Sweedler
Journal:  Trends Pharmacol Sci       Date:  2015-07-01       Impact factor: 14.819

7.  Relative Quantitation of Neuropeptides at Multiple Developmental Stages of the American Lobster Using N, N-Dimethyl Leucine Isobaric Tandem Mass Tags.

Authors:  Xiaoyue Jiang; Feng Xiang; Chenxi Jia; Amanda Rae Buchberger; Lingjun Li
Journal:  ACS Chem Neurosci       Date:  2018-02-07       Impact factor: 4.418

Review 8.  Peptides in the brain: mass spectrometry-based measurement approaches and challenges.

Authors:  Lingjun Li; Jonathan V Sweedler
Journal:  Annu Rev Anal Chem (Palo Alto Calif)       Date:  2008       Impact factor: 10.745

9.  Isobaric Labeling Strategy Utilizing 4-Plex N,N-Dimethyl Leucine (DiLeu) Tags Reveals Proteomic Changes Induced by Chemotherapy in Cerebrospinal Fluid of Children with B-Cell Acute Lymphoblastic Leukemia.

Authors:  Qinying Yu; Xiaofang Zhong; Bingming Chen; Yu Feng; Min Ma; Carol A Diamond; Julie S Voeller; Miriam Kim; Kenneth B DeSantes; Christian M Capitini; Neha J Patel; Margo L Hoover-Regan; Michael J Burke; Kimberly Janko; Diane M Puccetti; Chrysanthy Ikonomidou; Lingjun Li
Journal:  J Proteome Res       Date:  2020-05-27       Impact factor: 4.466

10.  TMTpro reagents: a set of isobaric labeling mass tags enables simultaneous proteome-wide measurements across 16 samples.

Authors:  Jiaming Li; Jonathan G Van Vranken; Laura Pontano Vaites; Devin K Schweppe; Edward L Huttlin; Chris Etienne; Premchendar Nandhikonda; Rosa Viner; Aaron M Robitaille; Andrew H Thompson; Karsten Kuhn; Ian Pike; Ryan D Bomgarden; John C Rogers; Steven P Gygi; Joao A Paulo
Journal:  Nat Methods       Date:  2020-03-16       Impact factor: 28.547

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