Literature DB >> 35168376

Detecting (non)parallel evolution in multidimensional spaces: angles, correlations and eigenanalysis.

Junya Watanabe1.   

Abstract

Parallelism between evolutionary trajectories in a trait space is often seen as evidence for repeatability of phenotypic evolution, and angles between trajectories play a pivotal role in the analysis of parallelism. However, properties of angles in multidimensional spaces have not been widely appreciated by biologists. To remedy this situation, this study provides a brief overview on geometric and statistical aspects of angles in multidimensional spaces. Under the null hypothesis that trajectory vectors have no preferred directions (i.e. uniform distribution on hypersphere), the angle between two independent vectors is concentrated around the right angle, with a more pronounced peak in a higher-dimensional space. This probability distribution is closely related to t- and beta distributions, which can be used for testing the null hypothesis concerning a pair of trajectories. A recently proposed method with eigenanalysis of a vector correlation matrix can be connected to the test of no correlation or concentration of multiple vectors, for which simple test procedures are available in the statistical literature. Concentration of vectors can also be examined by tools of directional statistics such as the Rayleigh test. These frameworks provide biologists with baselines to make statistically justified inferences for (non)parallel evolution.

Entities:  

Keywords:  allometric space; directional statistics; high-dimensional data; parallel evolution; phenotypic trajectory analysis

Mesh:

Year:  2022        PMID: 35168376      PMCID: PMC8847891          DOI: 10.1098/rsbl.2021.0638

Source DB:  PubMed          Journal:  Biol Lett        ISSN: 1744-9561            Impact factor:   3.703


  45 in total

1.  Allometric space and allometric disparity: a developmental perspective in the macroevolutionary analysis of morphological disparity.

Authors:  Sylvain Gerber; Gunther J Eble; Pascal Neige
Journal:  Evolution       Date:  2008-03-12       Impact factor: 3.694

2.  Analysis of character divergence along environmental gradients and other covariates.

Authors:  Dean C Adams; Michael L Collyer
Journal:  Evolution       Date:  2007-03       Impact factor: 3.694

3.  A general framework for the analysis of phenotypic trajectories in evolutionary studies.

Authors:  Dean C Adams; Michael L Collyer
Journal:  Evolution       Date:  2009-02-03       Impact factor: 3.694

Review 4.  Convergence, adaptation, and constraint.

Authors:  Jonathan B Losos
Journal:  Evolution       Date:  2011-04-07       Impact factor: 3.694

5.  Seeing the forest for the trees: the limitations of phylogenies in comparative biology. (American Society of Naturalists Address).

Authors:  Jonathan B Losos
Journal:  Am Nat       Date:  2011-06       Impact factor: 3.926

6.  The probability of improvement in Fisher's geometric model: a probabilistic approach.

Authors:  Yoav Ram; Lilach Hadany
Journal:  Theor Popul Biol       Date:  2014-10-26       Impact factor: 1.570

7.  Toward a Predictive Framework for Convergent Evolution: Integrating Natural History, Genetic Mechanisms, and Consequences for the Diversity of Life.

Authors:  Anurag A Agrawal
Journal:  Am Nat       Date:  2017-05-10       Impact factor: 3.926

8.  QUANTITATIVE GENETICS OF DEVELOPMENT: GENETIC CORRELATIONS AMONG AGE-SPECIFIC TRAIT VALUES AND THE EVOLUTION OF ONTOGENY.

Authors:  James M Cheverud; J J Rutledge; William R Atchley
Journal:  Evolution       Date:  1983-09       Impact factor: 3.694

9.  Predictability and Parallelism of Multitrait Adaptation.

Authors:  Randall Brian Langerhans
Journal:  J Hered       Date:  2017-12-21       Impact factor: 2.645

Review 10.  Size, shape, and form: concepts of allometry in geometric morphometrics.

Authors:  Christian Peter Klingenberg
Journal:  Dev Genes Evol       Date:  2016-04-01       Impact factor: 0.900

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