Literature DB >> 35138437

Defining the caprine γδ T cell WC1 multigenic array and evaluation of its expressed sequences and gene structure conservation among goat breeds and relative to cattle.

Alehegne W Yirsaw1, Alexandra Gillespie1, Fengqiu Zhang1, Timothy P L Smith2, Derek M Bickhart3, Karthick P Gunasekaran4, Maria Amir1, Haeree Park1,5, Janice C Telfer1,6, Cynthia L Baldwin7,8.   

Abstract

Workshop cluster 1 (WC1) molecules are part of the scavenger receptor cysteine-rich (SRCR) superfamily and act as hybrid co-receptors for the γδ T cell receptor and as pattern recognition receptors for binding pathogens. These members of the CD163 gene family are expressed on γδ T cells in the blood of ruminants. While the presence of WC1+ γδ T cells in the blood of goats has been demonstrated using monoclonal antibodies, there was no information available about the goat WC1 gene family. The caprine WC1 multigenic array was characterized here for number, structure and expression of genes, and similarity to WC1 genes of cattle and among goat breeds. We found sequence for 17 complete WC1 genes and evidence for up to 30 SRCR a1 or d1 domains which represent distinct signature domains for individual genes. This suggests substantially more WC1 genes than in cattle. Moreover, goats had seven different WC1 gene structures of which 4 are unique to goats. Caprine WC1 genes also had multiple transcript splice variants of their intracytoplasmic domains that eliminated tyrosines shown previously to be important for signal transduction. The most distal WC1 SRCR a1 domains were highly conserved among goat breeds, but fewer were conserved between goats and cattle. Since goats have a greater number of WC1 genes and unique WC1 gene structures relative to cattle, goat WC1 molecules may have expanded functions. This finding may impact research on next-generation vaccines designed to stimulate γδ T cells.
© 2022. The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature.

Entities:  

Keywords:  Caprine genome annotation; Gamma delta T cells; WC1

Mesh:

Substances:

Year:  2022        PMID: 35138437     DOI: 10.1007/s00251-022-01254-9

Source DB:  PubMed          Journal:  Immunogenetics        ISSN: 0093-7711            Impact factor:   2.846


  58 in total

1.  Basic local alignment search tool.

Authors:  S F Altschul; W Gish; W Miller; E W Myers; D J Lipman
Journal:  J Mol Biol       Date:  1990-10-05       Impact factor: 5.469

Review 2.  Gamma delta T cell receptors.

Authors:  Y-h Chien; M Bonneville
Journal:  Cell Mol Life Sci       Date:  2006-09       Impact factor: 9.261

3.  Single-molecule sequencing and chromatin conformation capture enable de novo reference assembly of the domestic goat genome.

Authors:  Derek M Bickhart; Benjamin D Rosen; Sergey Koren; Brian L Sayre; Alex R Hastie; Saki Chan; Joyce Lee; Ernest T Lam; Ivan Liachko; Shawn T Sullivan; Joshua N Burton; Heather J Huson; John C Nystrom; Christy M Kelley; Jana L Hutchison; Yang Zhou; Jiajie Sun; Alessandra Crisà; F Abel Ponce de León; John C Schwartz; John A Hammond; Geoffrey C Waldbieser; Steven G Schroeder; George E Liu; Maitreya J Dunham; Jay Shendure; Tad S Sonstegard; Adam M Phillippy; Curtis P Van Tassell; Timothy P L Smith
Journal:  Nat Genet       Date:  2017-03-06       Impact factor: 38.330

Review 4.  γδ T cells: first line of defense and beyond.

Authors:  Yueh-hsiu Chien; Christina Meyer; Marc Bonneville
Journal:  Annu Rev Immunol       Date:  2014-01-02       Impact factor: 28.527

5.  Signal transduction by different forms of the γδ T cell-specific pattern recognition receptor WC1.

Authors:  Chuang Chen; Haoting Hsu; Edward Hudgens; Janice C Telfer; Cynthia L Baldwin
Journal:  J Immunol       Date:  2014-05-21       Impact factor: 5.422

Review 6.  γδ T cells in livestock: Responses to pathogens and vaccine potential.

Authors:  Cynthia L Baldwin; Alehegne Yirsaw; Alexandria Gillespie; Lauren Le Page; Fengqiu Zhang; Payal Damani-Yokota; Janice C Telfer
Journal:  Transbound Emerg Dis       Date:  2019-09-12       Impact factor: 5.005

7.  Genome Annotation and Curation Using MAKER and MAKER-P.

Authors:  Michael S Campbell; Carson Holt; Barry Moore; Mark Yandell
Journal:  Curr Protoc Bioinformatics       Date:  2014-12-12

Review 8.  The need for animal source foods by Kenyan children.

Authors:  Nimrod O Bwibo; Charlotte G Neumann
Journal:  J Nutr       Date:  2003-11       Impact factor: 4.798

9.  Gene number determination and genetic polymorphism of the gamma delta T cell co-receptor WC1 genes.

Authors:  Chuang Chen; Carolyn T A Herzig; Leeson J Alexander; John W Keele; Tara G McDaneld; Janice C Telfer; Cynthia L Baldwin
Journal:  BMC Genet       Date:  2012-10-16       Impact factor: 2.797

10.  Early changes in cytokine expression in peste des petits ruminants disease.

Authors:  Jana Baron; Abdelghani Bin-Tarif; Rebecca Herbert; Lorraine Frost; Geraldine Taylor; Michael D Baron
Journal:  Vet Res       Date:  2014-02-22       Impact factor: 3.683

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