Literature DB >> 35138361

Similar Gut Bacterial Composition Between Patients With Ulcerative Colitis and Healthy Controls in a High Incidence Population: A Cross-sectional Study of the Faroe Islands IBD Cohort.

Marjun Á Fríðirksmørk Berbisá1,2, Kári Rubek Nielsen3, Anna Cäcilia Ingham4, Jóngerð Midjord3, Turið Hammer5, Poula Patursson3, Nicolina M O Vest2, Noomi O Gregersen6, Johan Burisch7, Amanda Vang2,8.   

Abstract

BACKGROUND: The Faroe Islands has the world's highest incidence of inflammatory bowel disease (IBD). Epidemiological studies have characterized this unique cohort and a decreased risk of developing IBD with emigration. Therefore, this well-characterized Faroese IBD cohort gives the opportunity to better understand this complex disease. This study represents the first investigation of the gut microbiota for the cohort.
METHODS: This cross-sectional study consisted of 41 patients with established ulcerative colitis and 144 age- and sex-matched healthy controls recruited through the Faroe Genome project. Participants donated a 1-time fecal sample and completed questionnaires on food frequency, background health, and lifestyle. 16S rRNA amplicon sequencing of the V3-V4 region was performed followed by bioinformatic analysis of taxonomy and diversity metrics.
RESULTS: The overall bacterial composition in both groups was dominated by Firmicutes and Bacteroidetes. No significant differences were found based on metrics of alpha or beta diversity. However, discriminatory analysis identified differential abundance of several indicator taxa in healthy controls and ulcerative colitis participants, whereas Akkermansia was completely absent from 27% of all study participants. Food frequency questionnaires revealed similar dietary patterns between the 2 groups.
CONCLUSION: The similarity in bacterial community composition and absence of the beneficial Akkermansia genus in both groups raise further questions concerning the underlying susceptibility toward inflammatory disorders within this high-risk population. Results vary widely by study design and geographic location, which speaks to the need for regionally tuned reference groups and disease-based studies on the Faroe Islands.
© 2022 Crohn’s & Colitis Foundation. Published by Oxford University Press on behalf of Crohn’s & Colitis Foundation.

Entities:  

Keywords:  Faroe Islands; gut microbiome; gut microbiota; isolated population; ulcerative colitis

Mesh:

Substances:

Year:  2022        PMID: 35138361      PMCID: PMC9247847          DOI: 10.1093/ibd/izab355

Source DB:  PubMed          Journal:  Inflamm Bowel Dis        ISSN: 1078-0998            Impact factor:   7.290


  33 in total

Review 1.  Ulcerative colitis. An epidemiological study based on a regional inception cohort, with special reference to disease course and prognosis.

Authors:  E Langholz
Journal:  Dan Med Bull       Date:  1999-11

2.  Molecular genetic basis and prevalence of glycogen storage disease type IIIA in the Faroe Islands.

Authors:  R Santer; M Kinner; U Steuerwald; S Kjaergaard; F Skovby; H Simonsen; W L Shaiu; Y T Chen; R Schneppenheim; J Schaub
Journal:  Eur J Hum Genet       Date:  2001-05       Impact factor: 4.246

Review 3.  Urbanization and the gut microbiota in health and inflammatory bowel disease.

Authors:  Tao Zuo; Michael A Kamm; Jean-Frédéric Colombel; Siew C Ng
Journal:  Nat Rev Gastroenterol Hepatol       Date:  2018-07       Impact factor: 46.802

4.  Regional variation limits applications of healthy gut microbiome reference ranges and disease models.

Authors:  Yan He; Wei Wu; Hui-Min Zheng; Pan Li; Daniel McDonald; Hua-Fang Sheng; Mu-Xuan Chen; Zi-Hui Chen; Gui-Yuan Ji; Zhong-Dai-Xi Zheng; Prabhakar Mujagond; Xiao-Jiao Chen; Zu-Hua Rong; Peng Chen; Li-Yi Lyu; Xian Wang; Chong-Bin Wu; Nan Yu; Yan-Jun Xu; Jia Yin; Jeroen Raes; Rob Knight; Wen-Jun Ma; Hong-Wei Zhou
Journal:  Nat Med       Date:  2018-08-27       Impact factor: 53.440

5.  Depicting the composition of gut microbiota in a population with varied ethnic origins but shared geography.

Authors:  Mélanie Deschasaux; Kristien E Bouter; Andrei Prodan; Evgeni Levin; Albert K Groen; Hilde Herrema; Valentina Tremaroli; Guido J Bakker; Ilias Attaye; Sara-Joan Pinto-Sietsma; Daniel H van Raalte; Marieke B Snijder; Mary Nicolaou; Ron Peters; Aeilko H Zwinderman; Fredrik Bäckhed; Max Nieuwdorp
Journal:  Nat Med       Date:  2018-08-27       Impact factor: 53.440

6.  Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2.

Authors:  Michael I Love; Wolfgang Huber; Simon Anders
Journal:  Genome Biol       Date:  2014       Impact factor: 13.583

7.  Methodology challenges in studying human gut microbiota - effects of collection, storage, DNA extraction and next generation sequencing technologies.

Authors:  Marina Panek; Hana Čipčić Paljetak; Anja Barešić; Mihaela Perić; Mario Matijašić; Ivana Lojkić; Darija Vranešić Bender; Željko Krznarić; Donatella Verbanac
Journal:  Sci Rep       Date:  2018-03-23       Impact factor: 4.379

8.  phyloseq: an R package for reproducible interactive analysis and graphics of microbiome census data.

Authors:  Paul J McMurdie; Susan Holmes
Journal:  PLoS One       Date:  2013-04-22       Impact factor: 3.240

9.  Fecal and Mucosal Microbiota Profiling in Irritable Bowel Syndrome and Inflammatory Bowel Disease.

Authors:  Alessandra Lo Presti; Francesca Zorzi; Federica Del Chierico; Annamaria Altomare; Silvia Cocca; Alessandra Avola; Fabiola De Biasio; Alessandra Russo; Eleonora Cella; Sofia Reddel; Emma Calabrese; Livia Biancone; Giovanni Monteleone; Michele Cicala; Silvia Angeletti; Massimo Ciccozzi; Lorenza Putignani; Michele Pier Luca Guarino
Journal:  Front Microbiol       Date:  2019-07-17       Impact factor: 5.640

10.  Ranking microbiome variance in inflammatory bowel disease: a large longitudinal intercontinental study.

Authors:  Adam G Clooney; Julia Eckenberger; Emilio Laserna-Mendieta; Kathryn A Sexton; Matthew T Bernstein; Kathy Vagianos; Michael Sargent; Feargal J Ryan; Carthage Moran; Donal Sheehan; Roy D Sleator; Laura E Targownik; Charles N Bernstein; Fergus Shanahan; Marcus J Claesson
Journal:  Gut       Date:  2020-06-14       Impact factor: 23.059

View more
  1 in total

Review 1.  Gut Microbiota Shifting in Irritable Bowel Syndrome: The Mysterious Role of Blastocystis sp.

Authors:  Alireza Olyaiee; Amir Sadeghi; Abbas Yadegar; Elnaz Sadat Mirsamadi; Hamed Mirjalali
Journal:  Front Med (Lausanne)       Date:  2022-06-20
  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.