Literature DB >> 35125451

Recurrent Loss of Heterozygosity in Pancreatic Neuroendocrine Tumors.

Megan Parilla1,2,3, David Chapel1,4, Jaclyn F Hechtman3,5, Pankhuri Wanjari1, Tony El Jabbour3, Aarti Sharma1, Lauren Ritterhouse1,6, Jeremy Segal1, Chad Vanderbilt3, David S Klimstra3, Namrata Setia1, Laura Tang3.   

Abstract

Chromosomal aneuploidies are prognostic markers across a wide variety of tumor types, and recent literature suggests that pancreatic neuroendocrine tumors are no different. In this study 214 patients with grade 1, 2, or 3 pancreatic neuroendocrine tumors had their tissue examined for chromosomal copy number alterations using next-generation sequencing. Univariate and multivariate statistical analyses were performed with all-cause mortality and disease-specific mortality as the end comparators. As such, the cohort stratified into 3 different clinically relevant chromosomal subgroups: an indolent subgroup characterized by loss of chromosome 11 in relative isolation, an aggressive subgroup characterized by losses of chromosomes 1, 2, 3, 6, 10, 11, 16, and 22 and with no loss of chromosomes 4, 5, 7, 12, 14, 17, 19, and 20, and finally a heterogeneous third group with a subset of cases that behave even more aggressively than the aforementioned.
Copyright © 2022 Wolters Kluwer Health, Inc. All rights reserved.

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Year:  2022        PMID: 35125451      PMCID: PMC9106831          DOI: 10.1097/PAS.0000000000001860

Source DB:  PubMed          Journal:  Am J Surg Pathol        ISSN: 0147-5185            Impact factor:   6.298


  22 in total

1.  FACETS: allele-specific copy number and clonal heterogeneity analysis tool for high-throughput DNA sequencing.

Authors:  Ronglai Shen; Venkatraman E Seshan
Journal:  Nucleic Acids Res       Date:  2016-06-07       Impact factor: 16.971

Review 2.  The risk of determining risk with multivariable models.

Authors:  J Concato; A R Feinstein; T R Holford
Journal:  Ann Intern Med       Date:  1993-02-01       Impact factor: 25.391

Review 3.  The first molecular details of ALT in human tumor cells.

Authors:  Alessandra Muntoni; Roger R Reddel
Journal:  Hum Mol Genet       Date:  2005-10-15       Impact factor: 6.150

4.  DAXX/ATRX, MEN1, and mTOR pathway genes are frequently altered in pancreatic neuroendocrine tumors.

Authors:  Yuchen Jiao; Chanjuan Shi; Barish H Edil; Roeland F de Wilde; David S Klimstra; Anirban Maitra; Richard D Schulick; Laura H Tang; Christopher L Wolfgang; Michael A Choti; Victor E Velculescu; Luis A Diaz; Bert Vogelstein; Kenneth W Kinzler; Ralph H Hruban; Nickolas Papadopoulos
Journal:  Science       Date:  2011-01-20       Impact factor: 47.728

5.  Memorial Sloan Kettering-Integrated Mutation Profiling of Actionable Cancer Targets (MSK-IMPACT): A Hybridization Capture-Based Next-Generation Sequencing Clinical Assay for Solid Tumor Molecular Oncology.

Authors:  Donavan T Cheng; Talia N Mitchell; Ahmet Zehir; Ronak H Shah; Ryma Benayed; Aijazuddin Syed; Raghu Chandramohan; Zhen Yu Liu; Helen H Won; Sasinya N Scott; A Rose Brannon; Catherine O'Reilly; Justyna Sadowska; Jacklyn Casanova; Angela Yannes; Jaclyn F Hechtman; Jinjuan Yao; Wei Song; Dara S Ross; Alifya Oultache; Snjezana Dogan; Laetitia Borsu; Meera Hameed; Khedoudja Nafa; Maria E Arcila; Marc Ladanyi; Michael F Berger
Journal:  J Mol Diagn       Date:  2015-03-20       Impact factor: 5.568

6.  ATRX loss is an independent predictor of poor survival in pancreatic neuroendocrine tumors.

Authors:  Angela Chou; Malinda Itchins; Philip R de Reuver; Jennifer Arena; Adele Clarkson; Amy Sheen; Loretta Sioson; Veronica Cheung; Aurel Perren; Christopher Nahm; Anubhav Mittal; Jaswinder S Samra; Marina Pajic; Anthony J Gill
Journal:  Hum Pathol       Date:  2018-08-03       Impact factor: 3.466

7.  Recurrent loss of heterozygosity correlates with clinical outcome in pancreatic neuroendocrine cancer.

Authors:  Ben Lawrence; Cherie Blenkiron; Kate Parker; Peter Tsai; Sandra Fitzgerald; Paula Shields; Tamsin Robb; Mee Ling Yeong; Nicole Kramer; Sarah James; Mik Black; Vicky Fan; Nooriyah Poonawala; Patrick Yap; Esther Coats; Braden Woodhouse; Reena Ramsaroop; Masato Yozu; Bridget Robinson; Kimiora Henare; Jonathan Koea; Peter Johnston; Richard Carroll; Saxon Connor; Helen Morrin; Marianne Elston; Christopher Jackson; Papaarangi Reid; John Windsor; Andrew MacCormick; Richard Babor; Adam Bartlett; Dragan Damianovich; Nicholas Knowlton; Sean Grimmond; Michael Findlay; Cristin Print
Journal:  NPJ Genom Med       Date:  2018-07-20       Impact factor: 8.617

Review 8.  DAXX in cancer: phenomena, processes, mechanisms and regulation.

Authors:  Iqbal Mahmud; Daiqing Liao
Journal:  Nucleic Acids Res       Date:  2019-09-05       Impact factor: 16.971

9.  Copy number variation detection using next generation sequencing read counts.

Authors:  Heng Wang; Dan Nettleton; Kai Ying
Journal:  BMC Bioinformatics       Date:  2014-04-14       Impact factor: 3.169

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