Literature DB >> 35121902

APOBEC3A drives deaminase domain-independent chromosomal instability to promote pancreatic cancer metastasis.

Sonja M Wörmann1,2, Amy Zhang3, Fredrik I Thege4,5, Robert W Cowan4,6, Dhwani N Rupani4,6, Runsheng Wang4,6, Sara L Manning4,6, Chris Gates7, Weisheng Wu7, Rena Levin-Klein8,9,10, Kimal I Rajapakshe4, Meifang Yu11, Asha S Multani12, Ya'an Kang13, Cullen M Taniguchi11, Katharina Schlacher14, Melena D Bellin15, Matthew H G Katz13, Michael P Kim13, Jason B Fleming16, Steven Gallinger3, Ravikanth Maddipati17, Reuben S Harris8,9,10,18, Faiyaz Notta3, Susan R Ross19,20, Anirban Maitra4,5, Andrew D Rhim21,22.   

Abstract

Despite efforts in understanding its underlying mechanisms, the etiology of chromosomal instability (CIN) remains unclear for many tumor types. Here, we identify CIN initiation as a previously undescribed function for APOBEC3A (A3A), a cytidine deaminase upregulated across cancer types. Using genetic mouse models of pancreatic ductal adenocarcinoma (PDA) and genomics analyses in human tumor cells we show that A3A-induced CIN leads to aggressive tumors characterized by enhanced early dissemination and metastasis in a STING-dependent manner and independently of the canonical deaminase functions of A3A. We show that A3A upregulation recapitulates numerous copy number alterations commonly observed in patients with PDA, including co-deletions in DNA repair pathway genes, which in turn render these tumors susceptible to poly (ADP-ribose) polymerase inhibition. Overall, our results demonstrate that A3A plays an unexpected role in PDA as a specific driver of CIN, with significant effects on disease progression and treatment.
© 2021. The Author(s), under exclusive licence to Springer Nature America, Inc.

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Year:  2021        PMID: 35121902     DOI: 10.1038/s43018-021-00268-8

Source DB:  PubMed          Journal:  Nat Cancer        ISSN: 2662-1347


  62 in total

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Authors:  Reuben S Harris; Mark T Liddament
Journal:  Nat Rev Immunol       Date:  2004-11       Impact factor: 53.106

2.  APOBEC3A damages the cellular genome during DNA replication.

Authors:  Abby M Green; Sébastien Landry; Konstantin Budagyan; Daphne C Avgousti; Sophia Shalhout; Ashok S Bhagwat; Matthew D Weitzman
Journal:  Cell Cycle       Date:  2016       Impact factor: 4.534

3.  Preinvasive and invasive ductal pancreatic cancer and its early detection in the mouse.

Authors:  Sunil R Hingorani; Emanuel F Petricoin; Anirban Maitra; Vinodh Rajapakse; Catrina King; Michael A Jacobetz; Sally Ross; Thomas P Conrads; Timothy D Veenstra; Ben A Hitt; Yoshiya Kawaguchi; Don Johann; Lance A Liotta; Howard C Crawford; Mary E Putt; Tyler Jacks; Christopher V E Wright; Ralph H Hruban; Andrew M Lowy; David A Tuveson
Journal:  Cancer Cell       Date:  2003-12       Impact factor: 31.743

4.  EMT and dissemination precede pancreatic tumor formation.

Authors:  Andrew D Rhim; Emily T Mirek; Nicole M Aiello; Anirban Maitra; Jennifer M Bailey; Florencia McAllister; Maximilian Reichert; Gregory L Beatty; Anil K Rustgi; Robert H Vonderheide; Steven D Leach; Ben Z Stanger
Journal:  Cell       Date:  2012-01-20       Impact factor: 41.582

5.  APOBEC3A deaminates transiently exposed single-strand DNA during LINE-1 retrotransposition.

Authors:  Sandra R Richardson; Iñigo Narvaiza; Randy A Planegger; Matthew D Weitzman; John V Moran
Journal:  Elife       Date:  2014-04-24       Impact factor: 8.140

6.  The repertoire of mutational signatures in human cancer.

Authors:  Ludmil B Alexandrov; Jaegil Kim; Gad Getz; Steven G Rozen; Michael R Stratton; Nicholas J Haradhvala; Mi Ni Huang; Alvin Wei Tian Ng; Yang Wu; Arnoud Boot; Kyle R Covington; Dmitry A Gordenin; Erik N Bergstrom; S M Ashiqul Islam; Nuria Lopez-Bigas; Leszek J Klimczak; John R McPherson; Sandro Morganella; Radhakrishnan Sabarinathan; David A Wheeler; Ville Mustonen
Journal:  Nature       Date:  2020-02-05       Impact factor: 49.962

7.  Specificity and heterogeneity of terahertz radiation effect on gene expression in mouse mesenchymal stem cells.

Authors:  Boian S Alexandrov; M Lisa Phipps; Ludmil B Alexandrov; Layla G Booshehri; Anna Erat; Janice Zabolotny; Charles H Mielke; Hou-Tong Chen; George Rodriguez; Kim Ø Rasmussen; Jennifer S Martinez; Alan R Bishop; Anny Usheva
Journal:  Sci Rep       Date:  2013-01-31       Impact factor: 4.379

8.  Signatures of mutational processes in human cancer.

Authors:  Ludmil B Alexandrov; Serena Nik-Zainal; David C Wedge; Samuel A J R Aparicio; Sam Behjati; Andrew V Biankin; Graham R Bignell; Niccolò Bolli; Ake Borg; Anne-Lise Børresen-Dale; Sandrine Boyault; Birgit Burkhardt; Adam P Butler; Carlos Caldas; Helen R Davies; Christine Desmedt; Roland Eils; Jórunn Erla Eyfjörd; John A Foekens; Mel Greaves; Fumie Hosoda; Barbara Hutter; Tomislav Ilicic; Sandrine Imbeaud; Marcin Imielinski; Marcin Imielinsk; Natalie Jäger; David T W Jones; David Jones; Stian Knappskog; Marcel Kool; Sunil R Lakhani; Carlos López-Otín; Sancha Martin; Nikhil C Munshi; Hiromi Nakamura; Paul A Northcott; Marina Pajic; Elli Papaemmanuil; Angelo Paradiso; John V Pearson; Xose S Puente; Keiran Raine; Manasa Ramakrishna; Andrea L Richardson; Julia Richter; Philip Rosenstiel; Matthias Schlesner; Ton N Schumacher; Paul N Span; Jon W Teague; Yasushi Totoki; Andrew N J Tutt; Rafael Valdés-Mas; Marit M van Buuren; Laura van 't Veer; Anne Vincent-Salomon; Nicola Waddell; Lucy R Yates; Jessica Zucman-Rossi; P Andrew Futreal; Ultan McDermott; Peter Lichter; Matthew Meyerson; Sean M Grimmond; Reiner Siebert; Elías Campo; Tatsuhiro Shibata; Stefan M Pfister; Peter J Campbell; Michael R Stratton
Journal:  Nature       Date:  2013-08-14       Impact factor: 49.962

9.  APOBEC3G inhibits elongation of HIV-1 reverse transcripts.

Authors:  Kate N Bishop; Mohit Verma; Eun-Young Kim; Steven M Wolinsky; Michael H Malim
Journal:  PLoS Pathog       Date:  2008-12-05       Impact factor: 6.823

10.  An APOBEC3A hypermutation signature is distinguishable from the signature of background mutagenesis by APOBEC3B in human cancers.

Authors:  Kin Chan; Steven A Roberts; Leszek J Klimczak; Joan F Sterling; Natalie Saini; Ewa P Malc; Jaegil Kim; David J Kwiatkowski; David C Fargo; Piotr A Mieczkowski; Gad Getz; Dmitry A Gordenin
Journal:  Nat Genet       Date:  2015-08-10       Impact factor: 38.330

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  1 in total

1.  A Programmable In Vivo CRISPR Activation Model Elucidates the Oncogenic and Immunosuppressive Functions of MYC in Lung Adenocarcinoma.

Authors:  Fredrik I Thege; Dhwani N Rupani; Bhargavi Brahmendra Barathi; Sara L Manning; Anirban Maitra; Andrew D Rhim; Sonja M Wörmann
Journal:  Cancer Res       Date:  2022-08-03       Impact factor: 13.312

  1 in total

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