| Literature DB >> 35118571 |
Mayyas Saleh Jaweesh1, Mohamad Eid Hammadeh2, Fatina W Dahadhah2, Mazhar Salim Al Zoubi3, Houda Amor2.
Abstract
BACKGROUND: Idiopathic male infertility can be attributed to genetic predispositions that affect sperm performance and function. Genetic alterations in the mitochondrial DNA (mtDNA) have been linked to certain types of male infertility and abnormal sperm function. Mutations in the mitochondrial cytochrome B (MT-CYB) gene might lead to some deficiencies in mitochondrial function. Thus, in the current study, we aimed to investigate the effect of mutations in the MT-CYB gene on sperm motility and male infertility. METHODS ANDEntities:
Keywords: Idiopathic infertility; MT-CYB; Polymorphisms; mtDNA mutation
Mesh:
Substances:
Year: 2022 PMID: 35118571 PMCID: PMC9174114 DOI: 10.1007/s11033-022-07200-y
Source DB: PubMed Journal: Mol Biol Rep ISSN: 0301-4851 Impact factor: 2.742
Forward and reverse primers for MT-CYB gene
| Gene | Primer direction | Sequence (5′→3′) | Product length |
|---|---|---|---|
| MT-CYB | MT-CYB-F | CGGACTACAACCACGACCAA | 1246 bp |
| MT-CYB-R | TCCGGTTTACAAGACTGGTGT |
Comparison of the semen analysis parameters between the control group (Fertile) and case groups (Sub-fertile)
| Parameter | Fertile (n = 44) | Subfertile (n = 67) | Mini–max | |
|---|---|---|---|---|
| Age (years) | 34 | 34 | 25–55 | 0.225 |
| Sperm concentration (106/ml) | 78.5 | 28 | 0.4–185 | < 0.0001 |
| Total motility (%) | 67.5 | 20 | 2–90 | < 0.0001 |
| Normal morphology (%) | 24.5 | 15 | 0–30 | < 0.0001 |
Genotypes of MT-CYB polymorphisms between subfertile patients and fertile individuals
| SNP | Contig position | Protein position | Amino Acid change | Genotype | Subfertile | Fertile | |
|---|---|---|---|---|---|---|---|
| RS2853508 A>G | 15326 | Thr194Ala | Missense variant | AA | 0 | 0 | N/A |
| AG | 0 | 0 | |||||
| GG | 67 | 44 | |||||
| RS28357685 G>A | 15110 | Ala122Thr | Missense variant | GG | 0 | 0 | 1.000 |
| GA | 2 | 1 | |||||
| AA | 65 | 43 | |||||
| RS527236194 T>C | 15784 | Pro346 | Synonymous variant | TT | 67 | 40 | |
| TC | 0 | 0 | |||||
| CC | 0 | 4 | |||||
| RS41518645 G>A | 15257 | Asp171Asn | Missense variant | GG | 62 | 41 | 1.000 |
| GA | 0 | 0 | |||||
| AA | 5 | 3 | |||||
| RS2853507 G>A | 15317 | Ala191Thr | Missense variant | GG | 67 | 43 | 0.1560 |
| GA | 0 | 0 | |||||
| AA | 0 | 1 | |||||
| RS28357373 T>C | 15629 | Leu295 | Synonymous variant | TT | 63 | 44 | |
| TC | 1 | 0 | |||||
| CC | 3 | 0 | |||||
| RS28357376 A>G | 15824 | Thr360Ala | Missence variant | AA | 66 | 44 | 0.5193 |
| AG | 0 | 0 | |||||
| GG | 1 | 0 | |||||
| RS35070048 A>G | 15311 | Ile189Val | Missence variant | AA | 66 | 44 | 0.5193 |
| AG | 0 | 0 | |||||
| GG | 1 | 0 | |||||
| RS28357369 A>G | 15244 | Gly166 | Synonymous variant | AA | 64 | 43 | 0.7060 |
| AG | 1 | 0 | |||||
| GG | 2 | 1 | |||||
| RS41504845 C>T | 15833 | Leu363 | Synonymous variant | CC | 61 | 44 | |
| CT | 1 | 0 | |||||
| TT | 5 | 0 | |||||
| RS2853506 A>G | 15218 | Thr158Ala | Missence variant | AA | 67 | 43 | 0.1604 |
| AG | 0 | 0 | |||||
| GG | 0 | 1 | |||||
| RS2854124 C>T | 15136 | Gly130 | Synonymous variant | CC | 67 | 43 | 0.3964 |
| CT | 0 | 1 | |||||
| TT | 0 | 0 | |||||
| RS28660155 T>C | 14871 | Ile42Thr | Missence variant | TT | 63 | 43 | 0.0909 |
| TC | 0 | 1 | |||||
| CC | 4 | 0 |
Alleles frequency of MT-CYB polymorphisms between subfertile patients and fertile individuals
| SNP | Contig position | Protein position | Alleles | Subfertile (N,%) | Fertile (N,%) | OR (95% CI)* | |
|---|---|---|---|---|---|---|---|
| RS2853508 A>G | 15326 | Thr194Ala | A | 0 (0%) | 0 (0%) | N/A | N/A |
| G | 134 (60%) | 88 (40%) | |||||
| RS28357685 G>A | 15110 | Ala122Thr | G | 2 (1%) | 1 (0%) | 1.318 (0.1177 to 14.769) | 0.8221 |
| A | 132 (59%) | 87 (39%) | |||||
| RS527236194 T>C | 15784 | Pro346 | T | 134 (60%) | 80 (36%) | 28.404 (1.617 to 499.07) | |
| C | 0 (0%) | 8 (4%) | |||||
| RS41518645 G>A | 15257 | Asp171Asn | G | 124 (56%) | 82 (37%) | 0.9073 (0.3175 to 2.593) | 0.8559 |
| A | 10 ( 4%) | 6 (3%) | |||||
| RS2853507 G>A | 15317 | Ala191Thr | G | 134 (60%) | 86 (39%) | 7.775 (0.3685 to 164.02) | 0.3044 |
| A | 0 (0%) | 2 (1%) | |||||
| RS28357373 T>C | 15629 | Leu295 | T | 127 (57%) | 88 (40%) | 0.09605 (0.005412 to 1.705) | 0.0741 |
| C | 7 (3%) | 0 (0%) | |||||
| RS28357376 A>G | 15824 | Thr360Ala | A | 132 (59%) | 88 (40%) | 0.2994 (0.01419 to 6.316) | 0.6707 |
| G | 2 (1%) | 0 (0%) | |||||
| RS35070048 A>G | 15311 | Ile189Val | A | 132 (59%) | 88 (40%) | 0.2994 (0.01419 to 6.316) | 0.6707 |
| G | 2 (1%) | 0 (0%) | |||||
| RS28357369 A>G | 15244 | Gly166 | A | 129 (58%) | 86 (39%) | 0.6000 (0.1138 to 3.164) | 0.8292 |
| G | 5 (2%) | 2 (1%) | |||||
| RS41504845 C>T | 15833 | Leu363 | C | 123 (55%) | 88 (40%) | 0.06067 (0.003526 to 1.044) | |
| T | 11 (5%) | 0 (0%) | |||||
| RS2853506 A>G | 15218 | Thr158Ala | A | 134 (60%) | 88 (40%) | 7.599 (0.3603 to 160.28) | 0.3130 |
| G | 0 (0%) | 2 (1%) | |||||
| RS2854124 C>T | 15136 | Gly130 | C | 134 (60%) | 87 (39%) | 4.611 (0.1856 to 114.58) | 0.8319 |
| T | 0 (0%) | 1(0%) | |||||
| RS28660155 T>C | 14871 | Ile42Thr | T | 126 (57%) | 87 (39%) | 0.1810 (0.02223 to 1.474) | 0.1503 |
| C | 8 (4%) | 1 (0%) |
N/A non-applicable