| Literature DB >> 35117430 |
Tianyou Yang1, Yang Wen2, Jiahao Li1, Tianbao Tan1, Jiliang Yang1, Jing Pan1, Chao Hu1, Yuxiao Yao1, Jiao Zhang3, Suhong Li4, Huimin Xia1, Jing He1, Yan Zou1.
Abstract
BACKGROUND: Single-nucleotide polymorphisms (SNPs) in genes may affect gene expression and contribute to cancer susceptibility. This study aimed to explore the association between CMYC gene polymorphisms and hepatoblastoma risk.Entities:
Keywords: CMYC; cancer susceptibility; hepatoblastoma; single-nucleotide polymorphisms (SNPs)
Year: 2020 PMID: 35117430 PMCID: PMC8798278 DOI: 10.21037/tcr.2019.12.19
Source DB: PubMed Journal: Transl Cancer Res ISSN: 2218-676X Impact factor: 1.241
Frequency distributions of selected variables in hepatoblastoma patients and controls
| Variables | Guangdong province | Henan province | Shaanxi province | Shanxi province | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Cases (n=146), n (%) | Controls (n=438), n (%) | P† | Cases (n=42), n (%) | Controls (n=176), n (%) | P† | Cases (n=15), n (%) | Controls (n=186), n (%) | P† | Cases (n=10), n (%) | Controls (n=158), n (%) | P† | ||||
| Age range, months | 0.63–149.97 | 0.07–156.00 | 0.214 | 0.83–108.00 | 0.10–108.00 | 0.285 | 3.60–72.00 | 0.03–60.00 | 0.286 | 0.23–72.00 | 0.004–60.00 | 0.785 | |||
| Mean ± SD | 23.16±24.59 | 23.11±18.62 | 26.73±24.96 | 27.28±18.87 | 21.50±24.20 | 23.66±16.66 | 20.32±20.38 | 21.70±18.28 | |||||||
| <17 | 79 (54.11) | 211 (48.17) | 21 (50.00) | 72 (40.91) | 9 (60.00) | 85 (45.70) | 5 (50.00) | 86 (54.43) | |||||||
| ≥17 | 67 (45.89) | 227 (51.83) | 21 (50.00) | 104 (59.09) | 6 (40.00) | 101 (54.30) | 5 (50.00) | 72 (45.57) | |||||||
| Gender | 0.961 | 0.830 | 0.544 | 0.912 | |||||||||||
| Female | 58 (39.73) | 175 (39.95) | 15 (35.71) | 66 (37.50) | 7 (46.67) | 72 (38.71) | 4 (40.00) | 66 (41.77) | |||||||
| Male | 88 (60.27) | 263 (60.05) | 27 (64.29) | 110 (62.50) | 8 (53.33) | 114 (61.29) | 6 (60.00) | 92 (58.23) | |||||||
| Clinical stages | |||||||||||||||
| I | 6 (4.11) | – | 19 (45.24) | – | 15 (100.00) | – | 2 (20.00) | – | |||||||
| II | 46 (31.51) | – | 3 (7.14) | – | – | – | 6 (60.00) | – | |||||||
| III | 37 (25.34) | – | 3 (7.14) | – | – | – | 0 (0.00) | – | |||||||
| IV | 12 (8.22) | – | 1 (2.38) | – | – | – | 2 (20.00) | – | |||||||
| NAb | 45 (30.82) | – | 16 (38.10) | – | – | – | – | – | |||||||
†, Two-sided 2 test for distributions between hepatoblastoma patients and cancer-free controls. SD, standard deviation; NA, not applicable.
Frequency distributions of selected variables in hepatoblastoma patients and controls
| Variables | Cases (n=213), N (%) | Controls (n=958), N (%) | P† |
|---|---|---|---|
| Age range, months | 0.23–149.97 | 0.004–156.000 | 0.105 |
| Mean ± SD | 23.62±24.36 | 23.75±18.30 | |
| <17 | 114 (53.52) | 454 (47.39) | |
| ≥17 | 99 (46.48) | 504 (52.61) | |
| Sex | 0.973 | ||
| Female | 84 (39.44) | 379 (39.56) | |
| Male | 129 (60.56) | 579 (60.44) | |
| Clinical stages | – | ||
| I | 42 (19.72) | – | |
| II | 55 (25.82) | – | |
| III | 40 (18.78) | – | |
| IV | 15 (7.04) | – | |
| NA‡ | 61 (28.64) | – |
†, Two-sided χ2 test for distributions between hepatoblastoma patients and cancer-free controls; ‡, stage information was absent. SD, standard deviation; NA, not applicable.
Logistic regression analysis of associations between CMYC polymorphisms and hepatoblastoma risk
| Genotype | Cases (N=213) | Controls (N=958) | P† | Crude OR (95% CI) | P | AOR (95% CI)‡ | P‡ |
|---|---|---|---|---|---|---|---|
| rs4645943 C>T (HWE, 0.850) | |||||||
| CC | 105 (49.30) | 496 (51.77) | 1.00 | 1.00 | |||
| CT | 90 (42.25) | 385 (40.19) | – | 1.10 (0.81–1.51) | 0.533 | 1.10 (0.81–1.51) | 0.532 |
| TT | 18 (8.45) | 77 (8.04) | – | 1.10 (0.63–1.92) | 0.726 | 1.10 (0.63–1.92) | 0.726 |
| Additive | – | – | 0.807 | 1.07 (0.85–1.35) | 0.550 | 1.07 (0.85–1.35) | 0.550 |
| Dominant | 108 (50.70) | 462 (48.23) | 0.513 | 1.10 (0.82–1.49) | 0.513 | 1.10 (0.82–1.49) | 0.512 |
| Recessive | 195 (91.55) | 881 (91.96) | 0.842 | 1.06 (0.62–1.81) | 0.842 | 1.06 (0.62–1.81) | 0.842 |
| rs2070583 A>G (HWE, 0.319) | |||||||
| AA | 143 (67.14) | 660 (68.89) | 1.00 | 1.00 | |||
| AG | 64 (30.05) | 265 (27.66) | – | 1.12 (0.80–1.55) | 0.516 | 1.12 (0.80–1.55) | 0.516 |
| GG | 6 (2.82) | 33 (3.44) | – | 0.84 (0.35–2.04) | 0.699 | 0.84 (0.35–2.04) | 0.699 |
| Additive | – | – | 0.727 | 1.04 (0.79–1.36) | 0.783 | 1.04 (0.79–1.36) | 0.783 |
| Dominant | 70 (32.86) | 298 (31.11) | 0.617 | 1.08 (0.79–1.49) | 0.617 | 1.08 (0.79–1.49) | 0.618 |
| Recessive | 207 (97.18) | 925 (96.56) | 0.644 | 0.81 (0.34–1.96) | 0.645 | 0.81 (0.34–1.97) | 0.645 |
| Combined effect of risk genotypes§ | |||||||
| 0–1 | 111 (52.11) | 529 (55.22) | 1.00 | 1.00 | |||
| 2 | 102 (47.89) | 429 (44.78) | 0.410 | 1.13 (0.84–1.53) | 0.410 | 1.13 (0.84–1.53) | 0.410 |
†, χ2 test for genotype distributions between hepatoblastoma patients and cancer-free controls; ‡, adjusted for age and sex; §, risk genotypes were carriers with rs4645943 CT/TT and rs2070583 AA/AG genotypes. AOR, adjusted odds ratio; CI, confidence interval; HWE, Hardy-Weinberg equilibrium.
Stratification analysis for association between CMYC genotypes and hepatoblastoma susceptibility
| Variables | rs4645943 (case/control) | AOR (95% CI)† | P† | rs2070583 (case/control) | AOR (95% CI)† | P† | Combine genotypes (case/control) | AOR (95% CI)† | P† | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CC | CT/TT | AA | AG/GG | 0–1 | 2 | |||||||
| Age, months | ||||||||||||
| <17 | 53/235 | 61/219 | 1.24 (0.82–1.86) | 0.315 | 74/308 | 40/146 | 1.14 (0.74–1.75) | 0.565 | 56/250 | 58/204 | 1.27 (0.84–1.91) | 0.257 |
| ≥17 | 52/261 | 47/243 | 0.97 (0.63–1.49) | 0.892 | 69/352 | 30/152 | 1.01 (0.63–1.61) | 0.979 | 55/279 | 44/225 | 0.99 (0.64–1.53) | 0.971 |
| Sex | ||||||||||||
| Female | 38/196 | 46/183 | 1.31 (0.81–2.10) | 0.273 | 54/266 | 30/113 | 1.32 (0.80–2.17) | 0.280 | 42/211 | 42/168 | 1.27 (0.79–2.03) | 0.332 |
| Male | 67/300 | 62/279 | 1.00 (0.68–1.46) | 0.986 | 89/394 | 40/185 | 0.96 (0.64–1.45) | 0.846 | 69/318 | 60/261 | 1.06 (0.72–1.56) | 0.763 |
| Clinical stage | ||||||||||||
| I + II | 43/496 | 54/462 | 1.35 (0.88–2.05) | 0.166 | 61/660 | 36/298 | 1.31 (0.85–2.02) | 0.225 | 48/529 | 49/429 | 1.26 (0.83–1.91) | 0.285 |
| III + IV | 27/496 | 28/462 | 1.11 (0.65–1.91) | 0.703 | 40/660 | 15/298 | 0.83 (0.45–1.53) | 0.556 | 28/529 | 27/429 | 1.19 (0.69–2.05) | 0.536 |
†, Adjusted for age and sex, omitting the corresponding stratification factor. AOR, adjusted odds ratio; CI, confidence interval.