| Literature DB >> 35115008 |
Masaki Yamamoto1,2, Kazuyuki Okazaki3, Yoko Kitai3, Koh Shinohara4, Satomi Yukawa4,3, Taro Noguchi4,3, Michio Tanaka4, Yasufumi Matsumura4,3, Yukiko Nishiyama3, Miki Nagao4,3.
Abstract
INTRODUCTION: In this work, six SARS-CoV-2-specific antibody assays were evaluated, namely, two pan-immunoglobulin (pan-Ig) assays [Roche Elecsys Anti-SARS-CoV-2 (named "Elecsys" in this study) and the PerkinElmer SuperFlex™ Anti-SARS-CoV-2 Ab Assay (SuperFlex_Ab)], two IgM assays [SuperFlex™ Anti-SARS-CoV-2 IgM Assay (SuperFlex_IgM) and YHLO iFlash-SARS-CoV-2 IgM (iFlash_IgM)], and two IgG assays [SuperFlex™ Anti-SARS-CoV-2 IgG Assay (SuperFlex_IgG) and iFlash-SARS-CoV-2 IgG (iFlash_IgG)]. Combination assays of SuperFlex™ (SuperFlex_any) and iFlash (iFlash_any) were also evaluated.Entities:
Keywords: Antibody testing; COVID-19; SARS-CoV-2; Serology
Mesh:
Substances:
Year: 2022 PMID: 35115008 PMCID: PMC8811998 DOI: 10.1186/s12985-022-01752-y
Source DB: PubMed Journal: Virol J ISSN: 1743-422X Impact factor: 4.099
Demographic characteristics of patients in COVID-19 group
| Total COVID-19 patients | Seropositive patients* | Seronegative patients | p value | |
|---|---|---|---|---|
| Age, years old (IQR) | 69.5 (57.25–82.5) | 71 (57.75–83.5) | 65.5 (57.3–73.8) | 0.31 |
| Sex, female (%) | 13 (24.1%) | 10 (20.8%) | 5 (50.0%) | 0.14 |
| < 0.01 | ||||
| Critical | 21 (38.9%) | 21 (43.8%) | 0 (0%) | 0.07 |
| Severe | 17 (31.5%) | 16 (33.3%) | 1 (16.7%) | 0.65 |
| Moderate | 9 (16.7%) | 7 (14.6%) | 2 (33.3%) | 0.26 |
| Mild | 5 (9.3%) | 2 (4.2%) | 3 (50.0%) | < 0.01 |
| Asymptomatic | 2 (3.7%) | 2 (4.2%) | 0 (0%) | 1.00 |
| < 0.01 | ||||
| MV and ECMO | 5 (9.3%) | 5 (10.4%) | 0 (0%) | 1.00 |
| MV | 14 (25.9%) | 14 (29.2%) | 0 (0%) | 0.32 |
| None or oxygen | 35 (64.8%) | 29 (60.4%) | 6 (100%) | 0.08 |
| Collected samples, no. (IQR) | 5 (3–9) | 7 (3–10.25) | 2 (2–2.75) | < 0.01 |
| Days of serum sample collection from onset, median days (IQR) | 18 (12–39) | 19 (12–40) | 6 (3–10) | < 0.01 |
IQR, interquartile range; NA, data not available; MV, mechanical ventilation; ECMO, extra corporeal membrane oxygenation; ICU, intensive care unit
*Patients who were positive for at least one of SARS-CoV-2 specific antibody testing
Patients and Samples analyzed in this study, and result of each assay in each period
| Days from symptom onset | Total patients, no | Seropositive patients*, no. (%) | Total collected samples, no | Samples with positive result**, no. (%) | Elecsys, no. (%) | SuperFlex_Ab, no. (%) | SuperFlex_IgM, no. (%) | SuperFlex_IgG, no. (%) | SuperFlex_any†, no. (%) | iFlash_IgM, no. (%) | iFlash_IgG, no. (%) | iFlash_any#, no. (%) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Day 1–7 | 23 | 14 (60.9%) | 53 | 24 (45.3%) | 16 (30.2%) | 18 (34.0%) | 3 (5.7%) | 11 (20.8%) | 18 (34.0%) | 8 (15.1%) | 19 (35.8%) | 19 (35.8%) |
| Day 8–14 | 39 | 32 (82.1%) | 109 | 82 (75.2%) | 66 (60.6%) | 69 (63.3%) | 18 (16.5%) | 61 (56.0%) | 71 (65.1%) | 34 (31.2%) | 71 (65.1%) | 71 (65.1%) |
| Day 1–14 total | 62 | 46 (74.2%) | 162 | 106 (65.4%) | 82 (50.6%) | 87 (53.7%) | 21 (13.0%) | 72 (44.4%) | 89 (54.9%) | 42 (25.9%) | 90 (55.6%) | 90 (55.6%) |
| Day 15–21 | 29 | 29 (100%) | 78 | 77 (98.7%) | 76 (97.4%) | 76 (97.4%) | 47 (60.3%) | 76 (97.4%) | 76 (97.4%) | 50 (64.1%) | 77 (98.7%) | 77 (98.7%) |
| Day 22–28 | 19 | 19 (100%) | 45 | 45 (100%) | 45 (100%) | 45 (100%) | 33 (73.3%) | 45 (100%) | 45 (100%) | 37 (82.2%) | 45 (100%) | 45 (100%) |
| Day 29–56 | 15 | 15 (100%) | 80 | 80 (100%) | 74 (92.5%) | 80 (100%) | 35 (43.8%) | 80 (100%) | 80 (100%) | 25 (31.3%) | 80 (100%) | 80 (100%) |
| Day 57–84 | 6 | 6 (100%) | 20 | 20 (100%) | 20 (100%) | 20 (100%) | 3 (15.0%) | 20 (100%) | 20 (100%) | 1 (5.0%) | 20 (100%) | 20 (100%) |
| Day 85–112 | 1 | 1 (100%) | 12 | 12 (100%) | 12 (100%) | 12 (100%) | 0 (0%) | 12 (100%) | 12 (100%) | 0 (0%) | 12 (100%) | 12 (100%) |
| Day 113–140 | 2 | 2 (100%) | 14 | 14 (100%) | 14 (100%) | 14 (100%) | 0 (0%) | 14 (100%) | 14 (100%) | 0 (0%) | 14 (100%) | 14 (100%) |
| Day 141–182 | 2 | 2 (100%) | 27 | 27 (100%) | 25 (92.6%) | 27 (100%) | 0 (0%) | 27 (100%) | 27 (100%) | 0 (0%) | 22 (81.5%) | 22 (81.5%) |
| Day 15–182 total | 74 | 74 (100%) | 276 | 275 (99.6%) | 266 (96.4%) | 274 (99.3%) | 118 (42.8%) | 274 (99.3%) | 274 (99.3%) | 113 (40.9%) | 270 (97.8%) | 270 (97.8%) |
| Total | 136 | 120 (88.2%) | 438 | 381 (87.0%) | 348 (79.5%) | 361 (82.4%) | 139 (31.7%) | 346 (79.0%) | 363 (82.9%) | 155 (35.4%) | 360 (82.2%) | 360 (82.2%) |
*Patients who were positive for at least one of SARS-CoV-2 specific antibody testing
**Samples with positive result for at least one of SARS-CoV-2 specific antibody testing
†The SuperFlex_any is the assay combined with SuperFlex_Ab, SuperFlex_IgM, and SuperFlex_IgG
#The iFlash_any is the assay combined with iFlash_IgM and iFlash_IgG
Assays for SARS-CoV-2 antibody testing used in this study
| Assay name (in this study) | Manufacturer (using instrument) | Measurement method | Target protein | Immunoglobulin class | FDA EUA | CE-IVD | |
|---|---|---|---|---|---|---|---|
| 1 | Elecsys Anti-SARS-CoV-2 (Elecsys) | Roche (Cobas e602) | ECLIA | N | Pan-Ig | (+) | (+) |
| 2 | SuperFlex™ Anti-SARS-CoV-2 Ab Assay (SuperFlex_Ab) | PerkinElmer (SuperFlex) | CLIA | S | Pan-Ig | (−) | (−) |
| 3 | SuperFlex™ Anti-SARS-CoV-2 IgM Assay (SuperFlex_IgM) | PerkinElmer (SuperFlex) | CLIA | N and S | IgM | (−) | (−) |
| 4 | SuperFlex™ Anti-SARS-CoV-2 IgG Assay (SuperFlex_IgG) | PerkinElmer (SuperFlex) | CLIA | S | IgG | (−) | (+) |
| 5 | iFlash-SARS-CoV-2 IgM (iFlash_IgM) | Shenzhen YHLO (iFlash 3000) | CLIA | N and (S) | IgM | (−) | (+) |
| 6 | iFlash-SARS-CoV-2 IgG (iFlash_IgG) | Shenzhen YHLO (iFlash 3000) | CLIA | N and (S) | IgG | (−) | (+) |
FDA, Food and Drug Administration; EUA, Emergency Use Authoraization; ECLIA, electro chemiluminescence immunoassay; CLIA, chemiluminescent immunoassay; N, nucleocapsid protein; S, spike protein; Pan-Ig, Pan-immunogulobulin
Fig. 1The positivity rate of each assay on each day from symptom onset. a The positivity rate of the pan-immunoglobulin assays [Elecsys (orange line) and SuperFlex_Ab (cyan line)] and combination assays [SuperFlex_any (purple line) and iFlash_any (red line)]. b The positivity rate of the IgM assays [SuperFlex_IgM (aqua line) and iFlash_IgM (pink line)] and IgG assays [SuperFlex_IgG (purple line) and iFlash_IgG (red line)]
Sensitivity, specificity, positive predicted value, and negative predicted value
| Sensitivity (95% CI) | Specificity (95% CI) | PPV (95% CI) | NPV (95% CI) | |
|---|---|---|---|---|
| Elecsys | 91.3% (88.1–94.0%) | 100% (96.4–100%) | 100% (98.9–100%) | 75.2% (67.0–82.3%) |
| SuperFlex_Ab | 94.8% (92.0–96.8%) | 100% (96.4–100%) | 100% (99.0–100%) | 83.3% (75.4–89.5%) |
| SuperFlex_IgM | 36.5% (31.6–41.5%) | 99.0% (94.6–100%) | 99.3% (96.1–100%) | 29.0% (24.3–34.2%) |
| SuperFlex_IgG | 90.8% (87.5–93.5%) | 100% (96.4–100%) | 100% (98.9–100%) | 74.1% (65.8–81.2%) |
| SuperFlex_any* | 95.3% (92.6–97.2%) | 99.0% (94.6–100%) | 99.7% (98.5–100%) | 84.6% (76.8–90.6%) |
| iFlash_IgM | 40.7% (35.7–45.8%) | 100% (96.4–100%) | 100% (97.6–100%) | 30.7% (25.7–36.0%) |
| iFlash_IgG | 94.5% (91.7–96.6%) | 100% (96.4–100%) | 100% (99.0–100%) | 82.6% (74.7–88.9%) |
| iFlash_any# | 94.5% (91.7–96.6%) | 100% (96.4–100%) | 100% (99.0–100%) | 82.6% (74.7–88.9%) |
| Elecsys | 77.4% (68.2–84.9%) | 100% (96.4–100%) | 100% (95.6–100%) | 80.6% (72.6–87.2%) |
| SuperFlex_Ab | 82.1% (73.4–88.8%) | 100% (96.4–100%) | 100% (95.8–100%) | 84.0% (76.2–90.1%) |
| SuperFlex_IgM | 19.8% (12.7–28.7%) | 99.0% (94.6–100%) | 95.5% (77.2–99.9%) | 53.8% (46.3–61.2%) |
| SuperFlex_IgG | 67.9% (58.2–76.7%) | 100% (96.4–100%) | 100% (95.0–100%) | 74.6% (66.4–81.7%) |
| SuperFlex_any* | 84.0% (75.6–90.4%) | 99.0% (94.6–100%) | 98.9% (94.0–100%) | 85.3% (77.6–91.2%) |
| iFlash_IgM | 39.6% (30.3–49.6%) | 100% (96.4–100%) | 100% (91.6–100%) | 61.0% (53.1–68.5%) |
| iFlash_IgG | 84.9% (76.6–91.1%) | 100% (96.4–100%) | 100% (96.0–100%) | 86.2% (78.6–91.9%) |
| iFlash_any# | 84.9% (76.6–91.1%) | 100% (96.4–100%) | 100% (96.0–100%) | 86.2% (78.6–91.9%) |
| Elecsys | 96.7% (93.9–98.5%) | 100% (96.4–100%) | 100% (98.6–100%) | 91.7% (84.9–96.2%) |
| SuperFlex_Ab | 99.6% (98.0–100%) | 100% (96.4–100%) | 100% (98.7–100%) | 99.0% (94.6–100%) |
| SuperFlex_IgM | 42.9% (37.0–49.0%) | 99.0% (94.6–100%) | 99.2% (95.4–100%) | 38.7% (32.7–44.9%) |
| SuperFlex_IgG | 99.6% (98.0–100%) | 100% (96.4–100%) | 100% (98.7–100%) | 99.0% (94.6–100%) |
| SuperFlex_any* | 99.6% (98.0–100%) | 99.0% (94.6–100%) | 99.6% (98.0–100%) | 99.0% (94.6–100%) |
| iFlash_IgM | 41.1% (35.2–47.2%) | 100% (96.4–100%) | 100% (96.8–100%) | 38.2% (32.3–44.3%) |
| iFlash_IgG | 98.2% (95.8–99.4%) | 100% (96.4–100%) | 100% (98.6–100%) | 95.2% (89.2–98.4%) |
| iFlash_any# | 98.2% (95.8–99.4%) | 100% (96.4–100%) | 100% (98.6–100%) | 95.2% (89.2–98.4%) |
PPV, positive predicted value; NPV, negative predicted value; CI, confidence interval
*The SuperFlex_any is the assay combined with SuperFlex_Ab, SuperFlex_IgM, and SuperFlex_IgG
# The iFlash_any is the assay combined with iFlash_IgM and iFlash_IgG
Fig. 2McNemar's exact test was used to compare each assay (pan-Ig assays and IgG assays). An asterisk indicates significantly different performance
Fig. 3The agreement of each assay using the concordance rate and Gwet's AC1. a-1–c-1 show the results of the concordance rate between each assay in each period. a-2–c-2 show the results of Gwet's AC1 (95% confidence interval)