Literature DB >> 35111495

Highly sensitive diagnostic method for colorectal cancer using the ratio of free DNA fragments in serum.

Satoshi Arakawa1, Soji Ozawa2, Takashi Ando3, Hiroya Takeuchi4, Yuko Kitagawa3, Jin Kawase1, Hisanori Oshima1, Hidetoshi Nagata1, Koji Atsuta1, Rie Yoshida1, Norihiko Kawabe1, Shunji Umemoto1, Zenichi Morise5, Akihiko Horiguchi1.   

Abstract

OBJECTIVES: The correlations of the ratio of long-/short-chain DNA fragments in blood with the existence of cancer and the clinicopathological features of colorectal cancer (CRC) were examined. The potential use of this ratio for diagnostic screening was evaluated.
METHODS: DNA concentrations were amplified using Alu247 for long-chain DNA fragments and Alu115 for long- and short-chain DNA fragments. The Alu247/115 ratio was calculated for 60 patients with CRC and 24 healthy volunteers. The correlation of the Alu247/115 ratio with clinicopathological variables and the efficacy of this ratio as a tumor marker were examined. The Alu247/115 ratio cut-off value was set using a receiver operating characteristic (ROC) curve.
RESULTS: The Alu247/115 ratio was significantly higher in patients with CRC than in healthy volunteers (P<0.001). The Alu247/115 ratio was also significantly higher in patients with Dukes stage A or B CRC than in healthy volunteers (P=0.034) as well as in patients with Dukes C or D CRC than in those with Dukes A or B CRC (P=0.016). Among patients with CRC, the Alu247/115 ratio was significantly higher in those with than without venous invasion (P=0.031). Using the cut-off value set from the ROC curve, the sensitivity of the Alu247/115 ratio was significantly higher than that of the carcinoembryonic antigen level (P=0.004) or the carbohydrate antigen 19-9 level (P<0.001).
CONCLUSION: Our data suggest that the Alu247/115 ratio is a promising tool for highly sensitive and early detection of CRC.

Entities:  

Keywords:  Alu247/115 ratio; Colorectal cancer; DNA fragments; Real-time polymerase chain reaction

Year:  2018        PMID: 35111495      PMCID: PMC8766231          DOI: 10.20407/fmj.2017-025

Source DB:  PubMed          Journal:  Fujita Med J        ISSN: 2189-7247


  25 in total

1.  Cell-free DNA in serum and plasma: comparison of ELISA and quantitative PCR.

Authors:  Stefan Holdenrieder; Petra Stieber; Lisa Y S Chan; Sandra Geiger; Andreas Kremer; Dorothea Nagel; Y M Dennis Lo
Journal:  Clin Chem       Date:  2005-08       Impact factor: 8.327

2.  Circulating cell-free DNA in serum as a biomarker of colorectal cancer.

Authors:  Benisio Ferreira da Silva Filho; Ana Pavla Almeida Diniz Gurgel; Manoel Álvaro de Freitas Lins Neto; Dalmo Almeida de Azevedo; Antonio Carlos de Freitas; Jacinto da Costa Silva Neto; Luiz Antonio Ferreira Silva
Journal:  J Clin Pathol       Date:  2013-07-06       Impact factor: 3.411

3.  Insertion and/or deletion of many repeated DNA sequences in human and higher ape evolution.

Authors:  H R Hwu; J W Roberts; E H Davidson; R J Britten
Journal:  Proc Natl Acad Sci U S A       Date:  1986-06       Impact factor: 11.205

4.  DNA fragments in the blood plasma of cancer patients: quantitations and evidence for their origin from apoptotic and necrotic cells.

Authors:  S Jahr; H Hentze; S Englisch; D Hardt; F O Fackelmayer; R D Hesch; R Knippers
Journal:  Cancer Res       Date:  2001-02-15       Impact factor: 12.701

5.  Prediction of breast tumor progression by integrity of free circulating DNA in serum.

Authors:  Naoyuki Umetani; Armando E Giuliano; Suzanne H Hiramatsu; Farin Amersi; Taku Nakagawa; Silvana Martino; Dave S B Hoon
Journal:  J Clin Oncol       Date:  2006-09-10       Impact factor: 44.544

6.  Time course of early and late changes in plasma DNA in trauma patients.

Authors:  Nicole Y L Lam; Timothy H Rainer; Lisa Y S Chan; Gavin M Joynt; Y M Dennis Lo
Journal:  Clin Chem       Date:  2003-08       Impact factor: 8.327

7.  Cancer incidence and incidence rates in Japan in 2002: based on data from 11 population-based cancer registries.

Authors:  Tomohiro Matsuda; Tomomi Marugame; Ken-ichi Kamo; Kota Katanoda; Wakiko Ajiki; Tomotaka Sobue
Journal:  Jpn J Clin Oncol       Date:  2008-08-16       Impact factor: 3.019

8.  Increased plasma DNA integrity in cancer patients.

Authors:  Brant G Wang; Han-Yao Huang; Yu-Chi Chen; Robert E Bristow; Keyanunoosh Kassauei; Chih-Chien Cheng; Richard Roden; Lori J Sokoll; Daniel W Chan; Ie-Ming Shih
Journal:  Cancer Res       Date:  2003-07-15       Impact factor: 12.701

9.  Characterization of circulating DNA in healthy human plasma.

Authors:  Nobuyasu Suzuki; Akihisa Kamataki; Junko Yamaki; Yoshimi Homma
Journal:  Clin Chim Acta       Date:  2007-09-08       Impact factor: 3.786

10.  Increased Free Circulating DNA Integrity Index as a Serum Biomarker in Patients with Colorectal Carcinoma.

Authors:  Dina El-Gayar; Nevine El-Abd; Noha Hassan; Reem Ali
Journal:  Asian Pac J Cancer Prev       Date:  2016
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