Literature DB >> 35099803

Dynole 34-2 and Acrylo-Dyn 2-30, Novel Dynamin GTPase Chemical Biology Probes.

Jennifer R Baker1, Nicholas S O'Brien1, Kate L Prichard1, Phillip J Robinson2, Adam McCluskey1, Cecilia C Russell3.   

Abstract

This protocol describes the chemical synthesis of the dynamin inhibitors Dynole 34-2 and Acrylo-Dyn 2-30, and their chemical scaffold matched partner inactive compounds. The chosen active and inactive paired compounds represent potent dynamin inhibitors and very closely related dynamin-inactive compounds, with the synthesis of three of the four compounds readily possible via a common intermediate. Combined with the assay data provided, this allows the interrogation of dynamin in vitro and potentially in vivo.
© 2022. The Author(s), under exclusive license to Springer Science+Business Media, LLC, part of Springer Nature.

Entities:  

Keywords:  Acrylo-Dyn; Chemical synthesis; Dynamin inhibitors; Dynole; Dynole 34-2; Dynole-31-2; Endocytosis; Molecular probes

Mesh:

Substances:

Year:  2022        PMID: 35099803     DOI: 10.1007/978-1-0716-1916-2_17

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  19 in total

1.  Nucleotide-dependent conformational changes in dynamin: evidence for a mechanochemical molecular spring.

Authors:  M H Stowell; B Marks; P Wigge; H T McMahon
Journal:  Nat Cell Biol       Date:  1999-05       Impact factor: 28.824

2.  Proteolytic processing of dynamin by cytoplasmic cathepsin L is a mechanism for proteinuric kidney disease.

Authors:  Sanja Sever; Mehmet M Altintas; Sharif R Nankoe; Clemens C Möller; David Ko; Changli Wei; Joel Henderson; Elizabetta C del Re; Lianne Hsing; Ann Erickson; Clemens D Cohen; Matthias Kretzler; Dontscho Kerjaschki; Alexander Rudensky; Boris Nikolic; Jochen Reiser
Journal:  J Clin Invest       Date:  2007-08       Impact factor: 14.808

3.  HIV infection is influenced by dynamin at 3 independent points in the viral life cycle.

Authors:  Anupriya Aggarwal; Tina L Hitchen; Lars Ootes; Samantha McAllery; Andrew Wong; Khanh Nguyen; Adam McCluskey; Phillip J Robinson; Stuart G Turville
Journal:  Traffic       Date:  2017-04-11       Impact factor: 6.215

4.  Crystal structure of nucleotide-free dynamin.

Authors:  Katja Faelber; York Posor; Song Gao; Martin Held; Yvette Roske; Dennis Schulze; Volker Haucke; Frank Noé; Oliver Daumke
Journal:  Nature       Date:  2011-09-18       Impact factor: 49.962

5.  Direct dynamin-actin interactions regulate the actin cytoskeleton.

Authors:  Changkyu Gu; Suma Yaddanapudi; Astrid Weins; Teresia Osborn; Jochen Reiser; Martin Pollak; John Hartwig; Sanja Sever
Journal:  EMBO J       Date:  2010-10-08       Impact factor: 11.598

6.  A dynamin mutant defines a superconstricted prefission state.

Authors:  Anna C Sundborger; Shunming Fang; Jürgen A Heymann; Pampa Ray; Joshua S Chappie; Jenny E Hinshaw
Journal:  Cell Rep       Date:  2014-07-31       Impact factor: 9.423

7.  Pharmacological targeting of actin-dependent dynamin oligomerization ameliorates chronic kidney disease in diverse animal models.

Authors:  Mario Schiffer; Beina Teng; Changkyu Gu; Valentina A Shchedrina; Marina Kasaikina; Vincent A Pham; Nils Hanke; Song Rong; Faikah Gueler; Patricia Schroder; Irini Tossidou; Joon-Keun Park; Lynne Staggs; Hermann Haller; Sergej Erschow; Denise Hilfiker-Kleiner; Changli Wei; Chuang Chen; Nicholas Tardi; Samy Hakroush; Martin K Selig; Aleksandr Vasilyev; Sandra Merscher; Jochen Reiser; Sanja Sever
Journal:  Nat Med       Date:  2015-05-11       Impact factor: 53.440

8.  A hemi-fission intermediate links two mechanistically distinct stages of membrane fission.

Authors:  Juha-Pekka Mattila; Anna V Shnyrova; Anna C Sundborger; Eva Rodriguez Hortelano; Marc Fuhrmans; Sylvia Neumann; Marcus Müller; Jenny E Hinshaw; Sandra L Schmid; Vadim A Frolov
Journal:  Nature       Date:  2015-06-29       Impact factor: 49.962

9.  Dynamin-2 Stabilizes the HIV-1 Fusion Pore with a Low Oligomeric State.

Authors:  Daniel M Jones; Luis A Alvarez; Rory Nolan; Margarita Ferriz; Raquel Sainz Urruela; Xènia Massana-Muñoz; Hila Novak-Kotzer; Michael L Dustin; Sergi Padilla-Parra
Journal:  Cell Rep       Date:  2017-01-10       Impact factor: 9.423

10.  Cryo-EM of the dynamin polymer assembled on lipid membrane.

Authors:  Leopold Kong; Kem A Sochacki; Huaibin Wang; Shunming Fang; Bertram Canagarajah; Andrew D Kehr; William J Rice; Marie-Paule Strub; Justin W Taraska; Jenny E Hinshaw
Journal:  Nature       Date:  2018-08-01       Impact factor: 49.962

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