Literature DB >> 35099605

A preliminary study on early postmortem submersion interval (PMSI) estimation and cause-of-death discrimination based on nontargeted metabolomics and machine learning algorithms.

Fu-Yuan Zhang1,2, Lin-Lin Wang1,2,3, Wen-Wen Dong1,2, Miao Zhang1,2,3, Dilichati Tash1,4, Xin-Jie Li1,2, Shu-Kui Du1,2, Hao-Miao Yuan1,2, Rui Zhao5,6,7, Da-Wei Guan8,9,10.   

Abstract

Postmortem submersion interval (PMSI) estimation and cause-of-death discrimination of corpses in water have long been challenges in forensic practice. Recently, many studies have linked postmortem metabolic changes with PMI extension, providing a potential strategy for estimating PMSI using the metabolome. Additionally, there is a lack of potential indicators with high sensitivity and specificity for drowning identification. In the present study, we profiled the untargeted metabolome of blood samples from drowning and postmortem submersion rats at different PMSIs within 24 h by liquid chromatography-tandem mass spectrometry (LC-MS/MS). A total of 601 metabolites were detected. Four different machine learning algorithms, including random forest (RF), partial least squares (PLS), support vector machine (SVM), and neural network (NN), were used to compare the efficiency of the machine learning methods. Nineteen metabolites with obvious temporal regularity were selected as candidate biomarkers according to "IncNodePurity." Robust models were built with these biomarkers, which yielded a mean absolute error of 1.067 h. Additionally, 36 other metabolites were identified to build the classifier model for discriminating drowning and postmortem submersion (AUC = 1, accuracy = 95%). Our results demonstrated the potential application of metabolomics combined with machine learning in PMSI estimation and cause-of-death discrimination.
© 2022. The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature.

Entities:  

Keywords:  Drowning; Forensic medicine; Machine learning; Metabolomics; Postmortem submersion interval

Mesh:

Substances:

Year:  2022        PMID: 35099605     DOI: 10.1007/s00414-022-02783-4

Source DB:  PubMed          Journal:  Int J Legal Med        ISSN: 0937-9827            Impact factor:   2.686


  28 in total

1.  Systems biology: Metabonomics.

Authors:  Jeremy K Nicholson; John C Lindon
Journal:  Nature       Date:  2008-10-23       Impact factor: 49.962

2.  A preliminary study on postmortem interval estimation of suffocated rats by GC-MS/MS-based plasma metabolic profiling.

Authors:  Takako Sato; Kei Zaitsu; Kento Tsuboi; Masakatsu Nomura; Maiko Kusano; Noriaki Shima; Shuntaro Abe; Akira Ishii; Hitoshi Tsuchihashi; Koichi Suzuki
Journal:  Anal Bioanal Chem       Date:  2015-03-08       Impact factor: 4.142

3.  A 1H NMR metabolomic approach for the estimation of the time since death using aqueous humour: an animal model.

Authors:  Emanuela Locci; Matteo Stocchero; Antonio Noto; Alberto Chighine; Luca Natali; Pietro Emanuele Napoli; Roberto Caria; Fabio De-Giorgio; Matteo Nioi; Ernesto d'Aloja
Journal:  Metabolomics       Date:  2019-05-08       Impact factor: 4.290

4.  Comparison of protocols for measuring and calculating postmortem submersion intervals for human analogs in fresh water.

Authors:  Michael K Humphreys; Edward Panacek; William Green; Elizabeth Albers
Journal:  J Forensic Sci       Date:  2012-12-27       Impact factor: 1.832

5.  Postmortem interval estimation: a novel approach utilizing gas chromatography/mass spectrometry-based biochemical profiling.

Authors:  Richard H Kaszynski; Shin Nishiumi; Takeshi Azuma; Masaru Yoshida; Takeshi Kondo; Motonori Takahashi; Migiwa Asano; Yasuhiro Ueno
Journal:  Anal Bioanal Chem       Date:  2016-03-01       Impact factor: 4.142

6.  Muscular hemorrhages around the scapula resulting from excessive upper extremity motion in cases of fatal drowning: autopsy findings for insights on manner of death.

Authors:  Toru Oshima; Maki Ohtani; Sohtaro Mimasaka
Journal:  Forensic Sci Int       Date:  2019-05-01       Impact factor: 2.395

7.  Serum biochemical markers in drowning: diagnostic efficacy of Strontium and other trace elements.

Authors:  M D Pérez-Cárceles; S del Pozo; A Sibón; J A Noguera; E Osuna; M A Vizcaya; A Luna
Journal:  Forensic Sci Int       Date:  2011-08-27       Impact factor: 2.395

Review 8.  Postmortem Changes in Animal Carcasses and Estimation of the Postmortem Interval.

Authors:  J W Brooks
Journal:  Vet Pathol       Date:  2016-03-04       Impact factor: 2.221

9.  Monitoring the modifications of the vitreous humor metabolite profile after death: an animal model.

Authors:  Maria Francesca Rosa; Paola Scano; Antonio Noto; Matteo Nioi; Roberta Sanna; Francesco Paribello; Fabio De-Giorgio; Emanuela Locci; Ernesto d'Aloja
Journal:  Biomed Res Int       Date:  2015-01-22       Impact factor: 3.411

10.  Comparative use of aqueous humour 1H NMR metabolomics and potassium concentration for PMI estimation in an animal model.

Authors:  Emanuela Locci; Matteo Stocchero; Rossella Gottardo; Fabio De-Giorgio; Roberto Demontis; Matteo Nioi; Alberto Chighine; Franco Tagliaro; Ernesto d'Aloja
Journal:  Int J Legal Med       Date:  2020-11-20       Impact factor: 2.686

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