Literature DB >> 35098263

Topological Learning and Its Application to Multimodal Brain Network Integration.

Tananun Songdechakraiwut1, Li Shen2, Moo Chung1.   

Abstract

A long-standing challenge in multimodal brain network analyses is to integrate topologically different brain networks obtained from diffusion and functional MRI in a coherent statistical framework. Existing multimodal frameworks will inevitably destroy the topological difference of the networks. In this paper, we propose a novel topological learning framework that integrates networks of different topology through persistent homology. Such challenging task is made possible through the introduction of a new topological loss that bypasses intrinsic computational bottlenecks and thus enables us to perform various topological computations and optimizations with ease. We validate the topological loss in extensive statistical simulations with ground truth to assess its effectiveness of discriminating networks. Among many possible applications, we demonstrate the versatility of topological loss in the twin imaging study where we determine the extend to which brain networks are genetically heritable.

Entities:  

Keywords:  Multimodal brain networks; Persistent homology; Topological data analysis; Twin brain imaging study; Wasserstein distance

Year:  2021        PMID: 35098263      PMCID: PMC8797159          DOI: 10.1007/978-3-030-87196-3_16

Source DB:  PubMed          Journal:  Med Image Comput Comput Assist Interv


  18 in total

1.  Heritability of "small-world" networks in the brain: a graph theoretical analysis of resting-state EEG functional connectivity.

Authors:  Dirk J A Smit; Cornelis J Stam; Danielle Posthuma; Dorret I Boomsma; Eco J C de Geus
Journal:  Hum Brain Mapp       Date:  2008-12       Impact factor: 5.038

2.  Network structure of cerebral cortex shapes functional connectivity on multiple time scales.

Authors:  Christopher J Honey; Rolf Kötter; Michael Breakspear; Olaf Sporns
Journal:  Proc Natl Acad Sci U S A       Date:  2007-06-04       Impact factor: 11.205

3.  A Bayesian Double Fusion Model for Resting-State Brain Connectivity Using Joint Functional and Structural Data.

Authors:  Hakmook Kang; Hernando Ombao; Christopher Fonnesbeck; Zhaohua Ding; Victoria L Morgan
Journal:  Brain Connect       Date:  2017-04-24

4.  Persistent brain network homology from the perspective of dendrogram.

Authors:  Hyekyoung Lee; Hyejin Kang; Moo K Chung; Bung-Nyun Kim; Dong Soo Lee
Journal:  IEEE Trans Med Imaging       Date:  2012-09-19       Impact factor: 10.048

5.  Persistent homology analysis of protein structure, flexibility, and folding.

Authors:  Kelin Xia; Guo-Wei Wei
Journal:  Int J Numer Method Biomed Eng       Date:  2014-06-24       Impact factor: 2.747

6.  Heritability of working memory brain activation.

Authors:  Gabriëlla A M Blokland; Katie L McMahon; Paul M Thompson; Nicholas G Martin; Greig I de Zubicaray; Margaret J Wright
Journal:  J Neurosci       Date:  2011-07-27       Impact factor: 6.167

7.  Genetic control over the resting brain.

Authors:  D C Glahn; A M Winkler; P Kochunov; L Almasy; R Duggirala; M A Carless; J C Curran; R L Olvera; A R Laird; S M Smith; C F Beckmann; P T Fox; J Blangero
Journal:  Proc Natl Acad Sci U S A       Date:  2010-01-19       Impact factor: 11.205

Review 8.  Complex brain networks: graph theoretical analysis of structural and functional systems.

Authors:  Ed Bullmore; Olaf Sporns
Journal:  Nat Rev Neurosci       Date:  2009-02-04       Impact factor: 34.870

9.  Exact topological inference of the resting-state brain networks in twins.

Authors:  Moo K Chung; Hyekyoung Lee; Alex DiChristofano; Hernando Ombao; Victor Solo
Journal:  Netw Neurosci       Date:  2019-07-01

10.  Multiple Kernel Learning Model for Relating Structural and Functional Connectivity in the Brain.

Authors:  Sriniwas Govinda Surampudi; Shruti Naik; Raju Bapi Surampudi; Viktor K Jirsa; Avinash Sharma; Dipanjan Roy
Journal:  Sci Rep       Date:  2018-02-19       Impact factor: 4.379

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