| Literature DB >> 35096580 |
Soudeh Ghafouri-Fard1, Tayyebeh Khoshbakht2, Mohammad Taheri3, Seyedpouzhia Shojaei4.
Abstract
Sprouty RTK signaling antagonist 4-intronic transcript 1 (SPRY4-IT1) is a long non-coding RNA (lncRNA) encoded by a gene located on 5q31.3. This lncRNA has a possible role in the regulation of cell growth, proliferation, and apoptosis. Moreover, since SPRY4-IT1 controls levels of lipin 2, it is also involved in the biosynthesis of lipids. During the process of biogenesis, SPRY4-IT1 is produced as a primary transcript which is then cleaved to generate a mature transcript which is localized in the cytoplasm. SPRY4-IT1 has oncogenic roles in diverse tissues. A possible route of participation of SPRY4-IT1 in the carcinogenesis is through sequestering miRNAs such as miR-101-3p, miR-6882-3p and miR-22-3p. The sponging effect of SPRY4-IT1 on miR-101 has been verified in colorectal cancer, osteosarcoma, cervical cancer, bladder cancer, gastric cancer and cholangiocarcinoma. SPRY4-IT1 has functional interactions with HIF-1α, NF-κB/p65, AMPK, ZEB1, MAPK and PI3K/Akt signaling. We explain the role of SPRY4-IT1 in the carcinogenesis according to evidence obtained from cell lines, xenograft models and clinical studies.Entities:
Keywords: SPRY4-IT1; biomarker; cancer; carcinogenesis; expression
Year: 2022 PMID: 35096580 PMCID: PMC8792834 DOI: 10.3389/fonc.2021.779483
Source DB: PubMed Journal: Front Oncol ISSN: 2234-943X Impact factor: 6.244
Figure 1Oncogenic effect of SPRY4-IT1 in colorectal and breast cancers.
Figure 2Effect of SPRY4-IT1 in the pathogenesis of gastric cancer and osteosarcoma.
Figure 3Effect of SPRY4-IT1 in the pathogenesis of lung, cervical and testicular cancers.
Figure 4Oncogenic role of SPRY4-IT1 in melanoma, glioma and pancreatic cancer.
Figure 5Oncogenic role of SPRY4-IT1 in bladder, liver and esophageal cancers.
Effect of SPRY4-IT1 in cancers based on cell line studies.
| Tumor type | Targets/Regulators and Signaling Pathways | Cell line | Function | Reference |
|---|---|---|---|---|
| Colorectal cancer | PDK1 | NCM460, T84, HT-29, SW480 | Δ SPRY4-IT1: ↓ growth, ↓ viability, ↓ colony formation, ↓ glycolysis | ( |
| _ | HCT116, LoVo, RKO, SW620, SW480, 293T | Δ SPRY4-IT1: ↓ proliferation, ↓ growth, ↓ invasion, ↓ EMT process, ↑ G0/G1 phase arrest, ↑ apoptosis | ( | |
| _ | HT-29, HCT-116, and SW-480, FHC | Δ SPRY4-IT1: ↓ proliferation, ↓ migration, ↓ invasion, ↓ EMT process, ↑ G0/G1 phase arrest | ( | |
| miR-101-3p | LoVo, RKO, SW620, and SW480 | Δ SPRY4-IT1: ↓ proliferation, ↓ invasion, ↓ EMT process | ( | |
| TCEB1, HIF-1α signaling pathways, NF-κB/p65 | HCT 116, Caco-2, HT-29, SW480, SW620 | ↑ SPRY4-IT1: ↑ migration, ↑ invasion | ( | |
| Breast cancer | miR‐6882‐3p, TCF7L2 | MCF‐7, T47D | Δ SPRY4-IT1: ↓ stemness | ( |
| SDF-1α/CXCR4 axis, NT21MP, SKA2 | SKBR-3, MCF-7, MDA-MB-231 | Δ SPRY4-IT1: ↓ proliferation, ↓ migration, ↓ invasion, ↑ G0/G1 phase arrest, ↑ apoptosis | ( | |
| ZNF703 | MD-MB-231, MD-MB-435S, MCF-10A, MCF-7 | Δ SPRY4-IT1: ↓ proliferation, ↑ G0/G1 phase arrest, ↑ apoptosis | ( | |
| TCEB1, HIF-1α signaling pathways, NF-κB/p65 | MCF-7, T-47D, MDA-MB-231 | ↑ SPRY4-IT1: ↑ migration, ↑ invasion | ( | |
| Ovarian cancer | TCEB1, HIF-1α signaling pathways, NF-κB/p65 | Caov-3, SK-OV-3, HEK293T, OVCAR-3 | ↑ SPRY4-IT1: ↑ migration, ↑ invasion | ( |
| _ | SKOV3, HO8910, ES-2, CAOV3, IOSE80 | ↑ SPRY4-IT1: ↓ proliferation, ↓ migration, ↓ invasion, ↓ EMT process, ↑ cell cycle arrest, ↑ apoptosis | ( | |
| Gastric cancer | miR-101-3p, AMPK | GES-1, MKN28, SGC7901, BGC823 | Δ SPRY4-IT1: ↓ proliferation, ↓ migration, ↓ invasion, ↓ self-renewal, ↑ G0/G1 arrest, ↑ apoptosis | ( |
| DNMT1 | SGC7901, BGC823, MGC803, AGS, MKN45, MKN28, HCG-27, GES-1 | Δ SPRY4-IT1: ↑ proliferation, ↑ migration, ↑ invasion, ↑ EMT process | ( | |
| Osteosarcoma | miR-101, ZEB1, ZEB2 | hFOB 1.19, U2OS, MG-63, Saos-2, 293 | Δ SPRY4-IT1: ↓ proliferation, ↓ migration, ↓ invasion, ↑ apoptosis | ( |
| _ | HOS, Saos-2, U2OS, MG-63, NHOst | Δ SPRY4-IT1: ↓ proliferation, ↓ migration, ↓ invasion, ↓ self-renewal, ↑ G0/G1 arrest, ↑ apoptosis | ( | |
| Lung cancer | MPZL-1 | A549/DDP, A549 | ↑ SPRY4-IT1: ↓ proliferation, ↓ EMT process, ↓ DDP resistance, ↑ apoptosis | ( |
| _ | H23, H1299, A549, SPC-A1, HLF | Δ SPRY4-IT1: ↓ migration, ↓ invasion | ( | |
| EZH2 | A549, SPC-A1, NCI-H1975, NCI-H1299, NCI-H1650, (SK-MES-1 | ↑ SPRY4-IT1: ↓ proliferation, ↓ migration, ↓ invasion, ↓ EMT process, ↑ apoptosis | ( | |
| Cervical cancer | miR-101-3p, ZEB1 | HeLa, CaSki | Δ SPRY4-IT1: ↓ proliferation, ↓ migration, ↓ invasion, ↓ EMT process | ( |
| Testicular germ cell tumor | PI3K/Akt signaling pathway | NT2-D1, 833 K | Δ SPRY4-IT1: ↓ proliferation, ↓ migration, ↓ invasion | ( |
| Melanoma | miR-22-3p, MAPK pathway | A375, A875, TE 353.SK | Δ SPRY4-IT1: ↓ proliferation, ↓ migration, ↓ invasion, ↓ EMT process | ( |
| Glioma | SKA2 | astrocytoma U251 | Δ SPRY4-IT1: ↓ proliferation, ↓ migration, ↓ invasion | ( |
| _ | U251, SF295, NHA | Δ SPRY4-IT1: ↓ proliferation, ↓ migration, ↓ EMT process | ( | |
| Pancreatic cancer | Cdc20 | BxPC-3, PANC-1 | Δ SPRY4-IT1: ↓ growth, ↓ migration, ↓ invasion, ↑ G0/G1 arrest, ↑ apoptosis | ( |
| Pancreatic ductal adenocarcinoma | _ | BxPC3, Capan-2, PANC1, SW1990 | Δ SPRY4-IT1: ↓ proliferation, ↑ apoptosis | ( |
| Cholangiocarcinoma | SP1, miR-101-3p, KLF2, LATS2, EZH2, LSD1, DNMT1 | RBE and HCCC-9810, HIBEC, CCLP-1, HuCCT1, Huh-28, KMBC, QBC939 | Δ SPRY4-IT1: ↓ proliferation, ↓ EMT process, ↑ apoptosis | ( |
| Gallbladder carcinoma | _ | EH-GB1, GBC-SD, SGC-996, NOZ, 293T | Δ SPRY4-IT1: ↓ proliferation, ↓ migration, ↓ EMT process, | ( |
| Bladder cancer | miR-101-3p, EZH2 | SV-HUC-1, EJ, UMUC3, T24T | Δ SPRY4-IT1: ↓ proliferation, ↓ migration, ↓ invasion, ↑ apoptosis | ( |
| _ | J82, T24, SW780, SV-40, SV-HUC-1 | Δ SPRY4-IT1: ↓ proliferation, ↓ migration, ↓ invasion | ( | |
| Hepatocellular carcinoma | ERRα | HL7702, MHCC97L, MHCC97H, HepG2, SMMC7721 | Δ SPRY4-IT1: ↓ proliferation, ↓ migration, ↓ invasion, ↓ colony formation, ↑ G0/G1 arrest, ↑ apoptosis | ( |
| Esophageal squamous cell carcinoma | _ | KYSE-450, KYSE-510, KYSE-150, KYSE-180, KYSE-30, KYSE-70s, and KYSE-140 | Δ SPRY4-IT1: ↓ proliferation, ↓ migration, ↓ invasion | ( |
| ZNF703 | TE-13 | Δ SPRY4-IT1: ↓ proliferation, ↓ viability | ( | |
| Clear cell renal cell carcinoma | _ | 786-O, ACHN, Caki-1, Caki-2, HK-2 | Δ SPRY4-IT1: ↓ proliferation, ↓ migration, ↓ invasion | ( |
Δ, knock-down or deletion; DDP, cisplatin.
Role of SPRY4-IT1 in cancers based on animal studies.
| Tumor Type | Animal models | Results | Reference |
|---|---|---|---|
| Breast cancer | 3‐ to 4‐week‐old female BALB/c(nu/nu) mice | ↑ SPRY4-IT1: ↑ tumor size, ↑ tumor weigh, ↑ stemness, ↑ self‐renewal capacity | ( |
| Gastric cancer | 3‐ to 4‐week‐old male BALB/c nude mice | Δ SPRY4-IT1: ↓ tumor weight, ↓ tumor growth, ↓ tumor size | ( |
| 5 weeks female athymic BALB/c nude mice | ↑ SPRY4-IT1: ↓ tumor weight, ↓ tumor size, ↓ metastasis | ( | |
| Osteosarcoma | BALB/c nude mice | Δ SPRY4-IT1: ↓ tumor volume, ↓ tumor weight | ( |
| Lung cancer | 4-week old female athymic BALB/c nude mice | ↑ SPRY4-IT1 + DDP Treatment: ↓ tumor volume, ↓ tumor weight | ( |
| 4-week old female athymic BALB/c nude mice | ↑ SPRY4-IT1: ↓ tumor volume, ↓ tumor weight, ↓ metastasis | ( | |
| Cervical cancer | 4-week old female BALB/c nude mice | Δ SPRY4-IT1: ↓ tumor volume, ↓ tumor weight, ↓ metastasis | ( |
| Pancreatic ductal adenocarcinoma | 6-week old female nude mice | Δ SPRY4-IT1: ↓ tumor weight | ( |
| Cholangiocarcinoma | 6-week old female BALB/c nude mice | Δ SPRY4-IT1: ↓ tumor weight, ↓ tumor growth | ( |
| Bladder cancer | 4-week old female BALB/c nude mice | Δ SPRY4-IT1: ↓ tumor volume, ↓ tumor weight | ( |
| Esophageal squamous cell carcinoma | 4-week old male BALB/c nude mice | Δ SPRY4-IT1: ↓ tumor weight, ↓ tumor growth | ( |
Δ, knock-down or deletion.
Effect of SPRY4-IT1 in cancers based on clinical studies.
| Tumor type | Samples | Expression(Tumor | Kaplan-Meier analysis (impact of SPRY4-IT1 up-regulation) | Univariate/Multivariate cox regression | Association of SPRY4-IT1 expression with Clinicopathologic characteristics | Reference |
|---|---|---|---|---|---|---|
| Colorectal cancer (CRC) | 72 CRC tissues and normal tissues | up | poorer OS | _ | _ | ( |
| 106 CRC tissues and ANCTs | up | poorer OS | SPRY4-IT1 levels are independent factors for CRC prognosis. | tumor bulk, depth of invasion, lymph node positivity, distant invasion, and tumor stage | ( | |
| 96 pair of CRC tissues and ANCTs | up | _ | _ | tumor size | ( | |
| 84 pair of CRC tissues and ANCTs | up | worse OS | SPRY4-IT1 level is an independent prognostic indicator for OS. | advanced TNM stage, depth of invasion, and metastasis | ( | |
| 88 CRC serum samples and 98 healthy controls | up | _ | _ | _ | ||
| 88 pair of CRC tissues and ANCTs | up | _ | _ | tumor size | ( | |
| 113 CRC tissues | up | shorter OS and DFS | _ | lymph node metastasis and advanced-stage disease | ( | |
| Breast cancer | 101 breast cancer patients | up | worse OS and DFS | _ | _ | ( |
| TCGA analysis: | up in patients with CD44+/CD24‐ | _ | _ | _ | ||
| 102 pairs of tumor tissues and ANCTs | up | poorer OS and DFS | SPRY4-IT1 level is an independent prognostic factor for both OS and DFS. | large tumor size, high TNM stage, and lymph node metastasis | ( | |
| 48 pairs of tumor tissues and ANCTs | up | _ | _ | larger tumors with a higher tumor burden, and more advanced tumors | ( | |
| 101 breast cancer tissues | up | shorter OS and DFS | _ | lymph node metastasis and advanced stage | ( | |
| Ovarian cancer | 96 ovarian cancer tissues | up | shorter OS and DFS | _ | lymph node metastasis and advanced-stage disease | ( |
| 15 pairs of tumor tissues and ANCTs | down | higher OS and DFS | _ | _ | ( | |
| Gastric cancer (GC) | 68 pairs of GC tissues and ANCTs | up | _ | _ | larger tumor size and advanced TNM stage | ( |
| 61 pairs of GC tissues and ANCTs | down | higher OS and DFS | _ | Decreased expression of SPRY4-IT1 is correlated with greater tumor bulk, advanced pathological stage, greater depth of invasion, and lymphatic metastasis. | ( | |
| Osteosarcoma | 56 pairs of tumor tissues and ANCTs | up | _ | _ | metastases, recurrence, and tumor maximum diameter | ( |
| Lung cancer | TCGA analysis: 412 LUAD patients | up | shorter OS | _ | _ | ( |
| 88 pairs of tumor tissues and ANCTs | up | poorer prognosis | Levels of SPRY4-IT1 and histological grade were independent prognostic factors for OS. | larger tumor size, and high histological grade | ||
| 121 pairs of NSCLC tissues and ANCTs | down | higher OS | Low levels of SPRY4-IT1 were independent predictors of poor survival for NSCLC. | tumor size, advanced pathological stage, and lymph node metastasis | ( | |
| Cervical cancer | 100 pairs of cervical cancer tissues and ANCTs | up | shorter OS | Expression of SPRY4‐IT1 was an independent prognostic factor for OS of cervical cancer patients. | tumor size, FIGO stage, SCC‐Ag, and lymph node metastasis | ( |
| Testicular germ cell tumor (TGCT) | 13 TGCTs and 11 normal testis samples | up | _ | _ | _ | ( |
| Melanoma | 70 cases of malignant melanoma and 79 normal controls | up | poorer prognosis | SPRY4‐IT1 was found to be an independent prognostic factor for OS in patients. | tumor site and TNM stage | ( |
| Glioma | 64 glioma specimens and 9 normal brain tissue specimens | up | _ | _ | _ | ( |
| 163 glioma tissues and ANCTs | up | poorer OS | Expression of SPRY4-IT1 and WHO grade were independently significant prognostic factors. | WHO grade, and tumor size | ( | |
| 18 pairs of glioma tissues and ANCTs | up | _ | _ | _ | ( | |
| Pancreatic ductal adenocarcinoma (PDAC) | 46 pairs of PDAC tissues and ANCTs | up | worse 5-year OS | SPRY4-IT1 was an independent predictor of poor OS. | advanced tumor stages and poor differentiation grade | ( |
| Cholangiocarcinoma (CCA) | 70 pairs of CCA tissues and ANCTs | up | worse OS and PFS | SPRY4-IT1 was an independent predictor of poor PFS and OS. | late tumor stage and advanced TNM stage | ( |
| Gallbladder carcinoma (GBC) | 38 pairs of GBC tissues and ANCTs | up | _ | _ | tumor sizes and tumor status, lymph node metastasis | ( |
| Bladder cancer | 60 pairs of bladder cancer tissues and ANCTs | up | _ | _ | high tumor grade, lymph node involvement and distant metastasis | ( |
| 68 pairs of UCB tissues and ANCTs | up | shorter OS | Expression of SPRY4-1T1, histological grade, cancer stage and lymph node involvement were found to be independent prognostic factors for patients with UCB. | advanced tumor stage, higher histological grade, and positive lymph node metastasis | ( | |
| Hepatocellular carcinoma (HCC) | 87 pairs of HCC tissues and ANCTs | up | _ | _ | differentiation, tumor size, and TNM stage | ( |
| Plasma of 60 HCC cases, 85 hepatitis B and cirrhosis patients, and 63 controls | higher in pre-operation than that at post-operation, hepatitis B and cirrhosis, and the control groups | _ | _ | _ | ||
| 82 pairs of HCC tissues and ANCTs | up | poor 5-year OS rate | TNM stage and metastasis | ( | ||
| Esophageal squamous cell carcinoma (ESCC) | 92 pairs of ESCC tissues and ANCTs | up | shorter OS | SPRY4-IT1 expression, lymph node metastasis, and TNM stage were found to be independent prognostic factors for OS of ESCC patients. | tumor differentiation, T classification, lymph node involvement, and clinical stage | ( |
| 50 pairs of ESCC tissues and ANCTs | up | _ | _ | advanced clinical stages | ( | |
| 48 pairs of ESCC tissues and ANCTs | up | _ | _ | _ | ( | |
| plasma of 24 clinical samples and 24 normal controls | up | _ | _ | _ | ||
| 92 pairs of esophageal cancer tissues and ANCTs | up | shorter OS and PFS | _ | tumor differentiation, T classification, lymph node metastasis, and pathological stage | ( | |
| Clear cell renal cell carcinoma (ccRCC) | 98 pairs of ccRCC tissues and ANCTs | up | shorter OS | SPRY4-IT1 expression histological grade, tumor stage, lymph node metastasis and distant metastasis were found to be independent prognostic factors for OS of ccRCC patients. | histological grade, tumor stage, lymph node metastasis, and distant metastasis | ( |
ANCTs, adjacent non-cancerous tissues; OS, Overall survival; TNM, tumor‐node‐metastasis; DFS, disease-free survival; LUAD, lung adenocarcinoma; NSCLC, non-small-cell lung cancer; PFS, progression free survival.
Impact of SPRY4-IT1 in cancer diagnosis.
| Tumor Type | Samples | Distinguishing potential | Area Under Curve | Sensitivity (%) | Specificity (%) | Accuracy (%) | References |
|---|---|---|---|---|---|---|---|
| Cervical cancer (CC) | 100 pairs of CC tissues and ANCTs | cervical cancer tissues | 0.741 | 78.3 | 63.6 | _ | ( |
| Melanoma | 70 cases of malignant melanoma and 79 normal subjects | patients with malignant melanoma | 0.813 | 72.2 | 82.4 | _ | ( |
| Esophageal squamous cell carcinoma (ESCC) | 147 ESCC patients and 123 healthy controls | ESCC patients | 0.800 | 48.2 | _ | _ | ( |
ANCTs, adjacent non-cancerous tissues.