David Ribeaucourt1,2,3, Georg T Höfler4, Mehdi Yemloul2, Bastien Bissaro1, Fanny Lambert3, Jean-Guy Berrin1, Mickael Lafond2, Caroline E Paul4. 1. INRAE, Aix Marseille Univ, UMR1163 Biodiversité et Biotechnologie Fongiques, 13009 Marseille, France. 2. Aix Marseille Univ, CNRS, Centrale Marseille, iSm2, 13013 Marseille, France. 3. V. Mane Fils, 620 route de Grasse, 06620 Le Bar sur Loup, France. 4. Biocatalysis, Department of Biotechnology, Delft University of Technology, Van der Maasweg 9, 2629 HZ Delft, The Netherlands.
Abstract
Biocatalytic pathways for the synthesis of (-)-menthol, the most sold flavor worldwide, are highly sought-after. To access the key intermediate (R)-citronellal used in current major industrial production routes, we established a one-pot bienzymatic cascade from inexpensive geraniol, overcoming the problematic biocatalytic reduction of the mixture of (E/Z)-isomers in citral by harnessing a copper radical oxidase (CgrAlcOx) and an old yellow enzyme (OYE). The cascade using OYE2 delivered 95.1% conversion to (R)-citronellal with 95.9% ee, a 62 mg scale-up affording high yield and similar optical purity. An alternative OYE, GluER, gave (S)-citronellal from geraniol with 95.3% conversion and 99.2% ee.
Biocatalytic pathways for the synthesis of (-)-menthol, the most sold flavor worldwide, are highly sought-after. To access the key intermediate (R)-citronellal used in current major industrial production routes, we established a one-pot bienzymatic cascade from inexpensive geraniol, overcoming the problematic biocatalytic reduction of the mixture of (E/Z)-isomers in citral by harnessing a copper radical oxidase (CgrAlcOx) and an old yellow enzyme (OYE). The cascade using OYE2 delivered 95.1% conversion to (R)-citronellal with 95.9% ee, a 62 mg scale-up affording high yield and similar optical purity. An alternative OYE, GluER, gave (S)-citronellal from geraniol with 95.3% conversion and 99.2% ee.
The acyclic terpene citronellal–which
gives off an intense lemon-, citronella-, and rose-type odor[1]–is a valuable molecule for its use in
flavors and fragrances[2] and is also of
utmost importance as a precursor for the industrial synthesis of (−)-menthol,
one of the chiral compounds with the largest commercial importance[3] and one of the most sold flavors.[4] Among the eight stereoisomers of menthol, only (−)-menthol
holds the characteristic “cooling” effect and the peppermint
minty odor, clean of off-flavor.[5] Two of
the three main industrial chemical synthesis routes to (−)-menthol
(Supporting Information (SI) Scheme S1)
employ (R)-citronellal (Scheme S2A) as an intermediate.[6,7] In order to improve
process sustainability and to provide access to alternative feedstock,
alleviating the dependency on fossil or unstable natural resources,[8] (R)-citronellal could be advantageously
produced via biocatalytic approaches. Alternative routes harnessing
inexpensive achiral substrates are especially sought-after.[6] An ideal biocatalytic route would be the production
of (R)-citronellal from the available, industrially
relevant citral.[9] This reduction reaction
can be carried out using flavin mononucleotide (FMN)-containing ene-reductases
of the old yellow enzyme (OYE; EC 1.6.99.1) family.[10−12] Ubiquitous
in Nature, OYEs are found in bacteria, fungi, plants, cyanobacteria,
and recently algae[13] and catalyze the asymmetric
reduction reaction of a wide variety of α,β-unsaturated
compounds.[14−16] However, such a biocatalytic route remains challenging,[17] since citral is found as a mixture of two isomers
(geranial or (E)-isomer and neral or (Z)-isomer) (Scheme S2), which greatly influences
the enantioselectivity of available OYEs.[18] So far, no OYE has been able to achieve efficient conversion of
citral and yield enantiopure (R)-citronellal with
>95% enantiomeric excess (ee),[19] as the enzymes tested were hampered by the presence of
both citral isomers and despite enzyme engineering attempts,[17,20,21] only OYE2p could reach 88.8% ee starting from an E/Z citral mixture of 10:9.[22] To avoid the
energetic-costly separation of citral isomers by distillation and
prevent their isomerization,[23] a direct
approach would be to supply in situ the OYE with
the appropriate E-isomer (i.e., geranial). To this
end, we envisioned that a subfamily of copper radical oxidases (CROs),
so-called CRO-AlcOx, able to oxidize a wide range of primary activated
and unactivated alcohols to the corresponding aldehydes,[24,25] could fulfill this role.CRO-AlcOx (EC 1.1.3.13; AA5_2[26,27]) are organic
cofactor-free enzymes that recently emerged from the exploration of
the fungal CROs family.[24,28,29] CROs are better known through the archetypal galactose 6-oxidase
from Fusarium graminearum (FgrGalOx;
EC 1.1.3.9; AA5_2), extensively studied,[30−34] engineered,[35−41] and broadly applied[42−47] since their initial discovery more than 60 years ago.[48] Only recently a few studies have started to
investigate the characteristics and application potential of CRO-AlcOx.[25,49−51] A better understanding of these enzymes is needed
to foster their use as biocatalysts. To date, CRO-AlcOx have never
been evaluated for application in multistep enzymatic reactions, while
alcohol oxidation is a key step in the synthesis route of many valuable
chemicals.[52] Similarly, OYEs, despite being
known for decades, have been only marginally used in cascade reactions
until recently.[53] Coupling these two enzymatic
systems together is therefore of interest to apprehend their potential
in more complex environments and to probe their robustness and relevance
for biotechnological applications.In this study, we developed
a bienzymatic cascade composed of the
CRO-AlcOx-catalyzed oxidation of the widely available terpene geraniol,[54] to yield specifically geranial further hydrogenated
by an OYE into either (R)-citronellal or (S)-citronellal (Scheme ). This work unlocks access to (R)-citronellal
with high optical purity using a wild-type OYE and establishes for
the first time the use of a CRO-AlcOx in a multienzymatic cascade,
contributing to a better understanding and control of these promising
enzymes.
Scheme 1
Geraniol Oxidation by a CRO-AlcOx (Here CgrAlcOx)
and Subsequent Geranial Reduction to (R)- or (S)-Citronellal by an OYE
Compounds are (1) geraniol, (2) geranial, (3a)
(R)-citronellal, and (3b) (S)-citronellal.
Geraniol Oxidation by a CRO-AlcOx (Here CgrAlcOx)
and Subsequent Geranial Reduction to (R)- or (S)-Citronellal by an OYE
Compounds are (1) geraniol, (2) geranial, (3a)
(R)-citronellal, and (3b) (S)-citronellal.The initial step of the cascade
was first considered. While geraniol
had already been described as a good substrate of CgrAlcOx in a previous study,[24] no conversion
assay or product analysis was performed. We therefore evaluated the
ability of CgrAlcOx to convert geraniol (10 mM),
starting with previously established conditions on octan-1-ol,[25] which include catalase (CAT) for in
situ H2O2 dismutation, and horseradish
peroxidase (HRP) for CgrAlcOx activation.[49] We observed the facile conversion of geraniol
(>99%, turnover number TON 10,000) in only 15 min (turnover frequency
TOF 11.1 s–1), at mild temperature (23 °C),
and the formation of one isomer of citral (Figure , Figures S12 and S13). This citral isomer was further identified as geranial by 1H NMR analysis (Figure S17) based
on the study of Zeng et al.[55] The concentrations
of accessory enzymes CAT and HRP were then further investigated. As
expected, both accessory enzymes are required to sustain the CgrAlcOx activity. A minimum of 0.5 μM HRP (Figure A) and 0.5 μM
CAT (Figure B) were
required to reach the maximum conversion efficiency. At least 1 μM CgrAlcOx was required for total conversion of geraniol in
15 min (Figure C).
Interestingly, the HRP requirement was much lower here compared with
that for the conversion of octan-1-ol in our previous study,[25] which could be due to the activated nature of
the substrate in this study, rendering its oxidation easier. While
HRP has been used as a CRO activator for a long time,[56] the underlying mechanism remains unclear. A direct protein–protein
interaction between the peroxidase and the AlcOx could be involved.[49]
Figure 1
CgrAlcOx-catalyzed oxidation of geraniol
with
(A) varying concentrations of HRP ([CAT] = 0.5 μM), (B) varying
concentrations of CAT ([HRP] = 0.5 μM), and (C) varying concentrations
of CgrAlcOx ([HRP] = 0.5 μM, [CAT] = 0.5 μM).
For panels B and C, CgrAlcOx was used at 1 μM.
Error bars represent standard deviation (s.d., independent experiments, n = 3). The legend in panel C applies also for panels A
and B. All reactions were incubated for 15 min at 23 °C, under
shaking (190 rpm).
CgrAlcOx-catalyzed oxidation of geraniol
with
(A) varying concentrations of HRP ([CAT] = 0.5 μM), (B) varying
concentrations of CAT ([HRP] = 0.5 μM), and (C) varying concentrations
of CgrAlcOx ([HRP] = 0.5 μM, [CAT] = 0.5 μM).
For panels B and C, CgrAlcOx was used at 1 μM.
Error bars represent standard deviation (s.d., independent experiments, n = 3). The legend in panel C applies also for panels A
and B. All reactions were incubated for 15 min at 23 °C, under
shaking (190 rpm).We then investigated
the second part of the cascade (Scheme ) to establish suitable conditions
for the OYE-catalyzed reduction step, preferably resulting in enantiopure
(R)-citronellal. Given the exceptionally fast formation
of geranial by CgrAlcOx (TOF 11.1 s–1; Figure ), it was
desirable to identify conditions for a fast reduction by an OYE. The
reduction step was investigated using citral (commercial mixture of
neral and geranial). The supply of redox equivalents to the OYE was
ensured by a NADPH regeneration system promoted by a glucose dehydrogenase
from Bacillus subtilis (BsGDH).
Initially, we investigated the influence of the concentration of OYE2
from Saccharomyces cerevisiae on the reduction of
20 mM citral over 5 h (Figure S4). As expected,
increased enzyme concentrations resulted in higher conversions, reaching
94.6% in 5 h with 10.67 μM OYE2, giving a TON of 1,773 and a
TOF of 0.10 s–1. However, we observed that, with
higher conversions, the ee of the product (R)-citronellal decreased (Figure S5). To investigate this decline in ee, we carried
out a time-course monitoring of conversion and ee values over a 6 h reaction (Figure ). As previously observed, with increased conversion
over time, the ee decreased. We expected the OYE-catalyzed
reduction of geranial to occur faster than that of neral,[18] changing the ratio between geranial and neral
over time. The consumption of neral eventually leads to (S)-citronellal, explaining the decreased optical purity of (R)-citronellal over time, although we currently lack an
explanation why the ratio between the remaining geranial and neral
showed only a small change in a nonlinear manner (Table S1). Finally, we explored the influence of the NADP+ concentration on conversion and observed that increased concentrations
resulted in higher conversions with 1 mM and 2 mM NAPD+, compared with 0.1 and 0.5 mM (Figure S6).
Figure 2
OYE2-catalyzed reduction of citral to citronellal over 6 h. The
pink bars correspond to the concentration of the citronellal product
(R + S enantiomers). The blue plot
corresponds to the enantiomeric excess of (R)-citronellal
versus (S)-citronellal. Reaction conditions: 20 mM
citral, 10.67 μM OYE2, 1 mM NADP+, 40 mM glucose,
6 U/mL BsGDH, 100 mM KPi buffer pH 8.0, incubated
at 25 °C and 300 rpm. Products were analyzed on a chiral GC-FID.
Error bars represent standard deviation (s.d., independent experiments, n = 2).
OYE2-catalyzed reduction of citral to citronellal over 6 h. The
pink bars correspond to the concentration of the citronellal product
(R + S enantiomers). The blue plot
corresponds to the enantiomeric excess of (R)-citronellal
versus (S)-citronellal. Reaction conditions: 20 mM
citral, 10.67 μM OYE2, 1 mM NADP+, 40 mM glucose,
6 U/mL BsGDH, 100 mM KPi buffer pH 8.0, incubated
at 25 °C and 300 rpm. Products were analyzed on a chiral GC-FID.
Error bars represent standard deviation (s.d., independent experiments, n = 2).Based on the parameters
we had determined for each individual enzymatic
step, we then carried out the one-pot bienzymatic (CgrAlcOx and OYE2) cascade, starting from geraniol as substrate. By
providing only geranial to the OYE2 thanks to the oxidation of geraniol
by CgrAlcOx, we anticipated that the OYE2-catalyzed
reduction should yield preferentially the (R)-citronellal.[18] Accordingly, we observed the formation of (R)-citronellal with an ee ≥ 95%
in 2.5 h (Figures A and S8). Parallel cascade experiments
coupling CgrAlcOx with OYEs from Thermus
scotoductus (TsOYE)[57] or Gluconobacter oxydans (GluER)[58] yielded the alternative (S)-citronellal
product, with ≥99% ee (Figure S16) and respective conversion yields of 37% and 95.3%.
Extending the reaction time from 16 to 24 h for TsOYE did not allow further improvement of the conversion yield (Figure S9), probably due to poor substrate affinity
of TsOYE toward this β-substituted substrate.[59,60] The use of higher temperature (i.e., 40 °C) for the conversion
of citral by the TsOYE only brought a minor enhancement
(Figure S7). A TsOYE double
mutant with wider substrate specificity, TsOYE-C25D/I67T,[61] only showed a 2-fold increase in conversions
compared with the TsOYE wild type with ≥99% ee (Figure S7); therefore, GluER
remained the best OYE to achieve high yield.
Figure 3
Bienzymatic conversion
of geraniol to citronellal by CgrAlcOx and OYEs.
(A) Concurrent one-pot cascade reaction in 2.5 h
with OYE2 to (R)-citronellal. (B) Sequential one-pot
cascade reaction using either OYE2 (to (R)-citronellal)
or GluER (to (S)-citronellal): first step (CgrAlcOx conversion of geraniol to geranial) performed in
15 min; second step (OYE conversion of geranial to citronellal) performed
in 2.5 h. Analysis by GC-FID (error bars show s.d. independent experiments, n = 3). Note: the y axis displayed in panel
A applies for panel B. Reaction conditions: 1 μM CgrAlcOx, 0.5 μM catalase, 0.5 μM HRP, 10.67 μM OYE2
or 8 μM GluER, 6 U/mL BsGDH, 40 mM glucose,
1 mM NADP+, pH 8.0 (50 mM NaPi buffer), 1% v/v acetone.
Reactions were incubated at 23 °C, under shaking (200 rpm). For
the reactions displayed in panel B, all reagents except for BsGDH were present at the first step; the second step was
initiated by the addition of BsGDH to the reaction
mixture.
Bienzymatic conversion
of geraniol to citronellal by CgrAlcOx and OYEs.
(A) Concurrent one-pot cascade reaction in 2.5 h
with OYE2 to (R)-citronellal. (B) Sequential one-pot
cascade reaction using either OYE2 (to (R)-citronellal)
or GluER (to (S)-citronellal): first step (CgrAlcOx conversion of geraniol to geranial) performed in
15 min; second step (OYE conversion of geranial to citronellal) performed
in 2.5 h. Analysis by GC-FID (error bars show s.d. independent experiments, n = 3). Note: the y axis displayed in panel
A applies for panel B. Reaction conditions: 1 μM CgrAlcOx, 0.5 μM catalase, 0.5 μM HRP, 10.67 μM OYE2
or 8 μM GluER, 6 U/mL BsGDH, 40 mM glucose,
1 mM NADP+, pH 8.0 (50 mM NaPi buffer), 1% v/v acetone.
Reactions were incubated at 23 °C, under shaking (200 rpm). For
the reactions displayed in panel B, all reagents except for BsGDH were present at the first step; the second step was
initiated by the addition of BsGDH to the reaction
mixture.When performing the full cascade
in a concurrent one-pot system,
we observed a proportion of geraniol that was not oxidized (Figures A and S14A). We conjectured that in the conditions
we applied, CgrAlcOx could be partly inhibited by
the final citronellal product. Indeed, conversions of geraniol by CgrAlcOx performed in the presence of exogenously added
citronellal resulted in an incomplete reaction (Figure S10). Such observation is consistent with a hypothesis
formulated previously on the possible inhibition of CgrAlcOx by hydrated alkyl-aldehydes.[25,49] In the case
of geranial, the conjugation effect stabilizes the molecule in its
aldehyde form and disfavors its hydration, whereas citronellal does
not benefit from this conjugation effect and would partly form geminal-diols upon hydration of the aldehyde,[62,63] likely inhibiting CgrAlcOx.To avoid initial CgrAlcOx inhibition with citronellal,
we performed a sequential one-pot conversion (with OYE2) by running
first a 15 min reaction with all reagents except BsGDH and leaving an additional 2.5 h of reaction after addition of BsGDH. Under these conditions, >99% of geraniol was converted
and 95.1% of the intermediate geranial was converted to (R)-citronellal with 95.9% ee (Figures B and S14B).Encouraged by the enantioenriched (R)-citronellal
obtained with CgrAlcOx and OYE2, we carried out the
bienzymatic cascade reaction at a larger scale, i.e. in a 20 mL reaction
volume, with a starting concentration of geraniol of 20 mM (corresponding
to 62 mg). To ensure the completion of the cascade, the reaction times
were increased to 1 h for the alcohol oxidation step (catalyzed by CgrAlcOx), followed by 5 h for the conjugated alkene reduction
step (catalyzed by OYE2). Additionally, prior to starting the reaction,
the headspace and reaction media were saturated with pure oxygen to
circumvent potential oxygen limitation in the first step. The resulting
(R)-citronellal was simply extracted with ethyl acetate
without further purification and characterized by chiral GC (Figure S15) and NMR spectroscopy (Figures S18 and S19). Conversion of the geraniol
was 98% with a final isolated yield of 72% with 44.3 mg of (R)-citronellal with 95.1% ee. 1H NMR showed a highly pure product after extraction with ethyl acetate
(Figure S18). Comparison of the catalytic
efficiencies of the enzymes showed a TON of 17,458 (TOF 4.85 s–1) for CgrAlcOx and 1,636 (TOF 0.09
s–1) for OYE2. Considering that class III OYEs such
as TsOYE afford the (S)-enantiomer
exclusively,[14] it is possible that the
incomplete enantioselectivity observed with OYE2 (class II) may be
due to kinetic differentiation.To increase the catalytic efficiency
of our system, small-scale
experiments were carried out at higher substrate concentrations. Under
the same reaction conditions as above, CgrAlcOx was
able to convert 91% (±6.7%) of 50 mM geraniol in 2.5 h. The conversion
was most likely hampered by lack of oxygen in the medium. Further
upscaling of the reaction would require another reactor design to
ensure sufficient oxygen supply to the CgrAlcOx.
A possible solution to overcome the oxygen limitation would be the
use of a segmented flow reactor that has recently been implemented
in biocatalysis.[64,65] We have previously demonstrated
higher substrate concentrations for the OYE-catalyzed reaction along
with others,[66,67] and we do not foresee any limitations
for further scale-up.In conclusion, we established a one-pot
bienzymatic cascade starting
from inexpensive geraniol to specifically yield (R)-citronellal in high optical purity ≥95% ee, overcoming the problematic reduction of the mixture of (E/Z)-isomers in citral by OYEs.[20] This cascade is tunable, by switching the OYE to produce the alternative
enantiomer, and scalable, retaining the high optical purity. Together
these results provide a biocatalytic method for the production of
the key intermediate (R)-citronellal in the synthesis
of (−)-menthol, the most sold flavor worldwide.[4] We anticipate our biocatalytic cascade to provide an alternative
route to achieve enantiopure (R)-citronellal and
to expand the use of CRO-AlcOx as platform enzymes for multienzymatic
reactions.
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