| Literature DB >> 35095596 |
Bo Zhang1, Gang Wang2, Cheng Bing Huang3, Jian Nan Zhu3, Yong Xue3, Jian Hu1.
Abstract
Background: Alcohol dependence is an overall health-related challenge; however, the specific mechanisms underlying alcohol dependence remain unclear. Serine proteinase inhibitor A3 (SERPINA3) plays crucial roles in multiple human diseases; however, its role in alcohol dependence clinical practice has not been confirmed.Entities:
Keywords: SERPINA3; alcohol dependence; bioinformatics analysis; differently expressed genes; relapse biomarkers
Year: 2022 PMID: 35095596 PMCID: PMC8790540 DOI: 10.3389/fpsyt.2021.779143
Source DB: PubMed Journal: Front Psychiatry ISSN: 1664-0640 Impact factor: 4.157
Figure 1Venn diagram showing DEGs between three microarray databases for genes associated with alcohol dependence. The three datasets have one overlapping gene, SERPINA3.
Figure 2PPI network for SERPINA3. The interacting genes were identified using the STRING database and visualized using Cytoscape.
Figure 3Clustering module 1 scored 6.571 and had 8 nodes and 23 edges. The hub gene is ELANE.
Figure 4SERPINA3 target gene prediction. The five datasets had one overlapping microRNA, miR-137.
Figure 5Comparison of plasma SERPINA3 and IL-6 levels between patients with alcohol dependence and the healthy control group.
Correlation between basic clinical information, laboratory tests, and SERPINA3 levels in the plasma of patients recruited for the study.
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| Age, years | 45 ± 11 | 44 ± 10 | 0.540 |
| Male, | 29 (100) | 28 (96.6) | 1.00 |
| Education (year) | 1.00 | ||
| ≤ 6 | 4 (13.8%) | 5 (17.2%) | |
| 6–12 | 21 (72.4%) | 21 (72.4%) | |
| ≥12 | 4 (13.8%) | 3 (10.3%) | |
| Marital status, | 0.530 | ||
| Unmarried | 5 (17.2%) | 3 (10.3%) | |
| Married | 20 (69.0%) | 19 (65.5%) | |
| Divorced | 4 (13.8%) | 7 (24.1%) | |
| Occupation, | 0.654 | ||
| Mental labor | 4 (13.8%) | 3 (10.3%) | |
| Physical labor | 12 (41.4%) | 9 (31.0%) | |
| Unemployed | 13 (44.8%) | 17 (58.6%) | |
| BMI, kg/m2 | 23.29 ± 3.44 | 22.30 ± 3.03 | 0.251 |
| Drinking duration (year) | 19 ± 10 | 17 ± 9 | 0.315 |
| Heart rate, bpm | 97.17 | 12.58 | 0.101 |
| Systolic blood pressure, mmHg | 134 ± 17 | 138 ± 16 | 0.351 |
| Diastolic blood pressure, mmHg | 89 ± 11 | 91 ± 10 | 0.427 |
| Hypertension, | 6 (20.7%) | 6 (20.7%) | 1.00 |
| Diabetes mellitus, | 2 (6.9%) | 1 (3.4%) | 1.00 |
| Current smoker, | 26 (89.7%) | 25 (86.2%) | 1.00 |
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| RBC | 7.51 ± 18.65 | 4.32 ± 0.50 | 0.362 |
| Hemoglobin, g/L | 136.24 ± 25.52 | 144.48 ± 13.19 | 0.130 |
| MCV | 103.66 ± 9.04 | 99.91 ± 5.83 | 0.065 |
| Leukocytes, ×109/L | 6.89 ± 2.58 | 8.60 ± 3.00 | 0.023 |
| Neutrophil, ×109/L | 4.81 ± 2.29 | 6.26 ± 2.89 | 0.038 |
| Lymphocyte, ×109/L | 1.59 ± 0.68 | 1.76 ± 0.81 | 0.390 |
| Platelets, ×109/L | 200.54 ± 80.85 | 199.23 ± 64.73 | 0.946 |
| AST, U/L | 117.48 ± 144.88 | 62.69 ± 55.26 | 0.065 |
| ALT, U/l | 50.17 ± 45.81 | 38.52 ± 27.92 | 0.247 |
| GGT, U/L | 299.38 ± 399.95 | 216.90 ± 326.70 | 0.393 |
| TBIL, μmol/L | 23.48 ± 22.77 | 21.76 ± 16.35 | 0.743 |
| DBIL, μmol/L | 9.60 ± 11.83 | 7.05 ± 5.41 | 0.295 |
| IBIL, μmol/L | 11.63 ± 7.60 | 11.18 ± 7.74 | 0.823 |
| Total cholesterol, mmol/L | 6.08 ± 4.47 | 5.05 ± 2.29 | 0.274 |
| HDL, mmol/L | 1.52 ± 0.64 | 1.65 ± 0.50 | 0.377 |
| LDL, mmol/L | 2.69 ± 1.08 | 2.38 ± 0.92 | 0.247 |
| Triglycerides, mmol/L | 3.19 ± 5.98 | 1.94 ± 2.86 | 0.315 |
| Serum creatinine, | 57.63 ± 19.31 | 62.10 ± 18.00 | 0.365 |
| UA, μmol/L | 392.49 ± 106.93 | 404.20 ± 163.69 | 0.748 |
| BUN, mmol/L | 4.21 ± 2.18 | 4.29 ± 2.22 | 0.896 |
| Fasting glucose, mmol/L | 5.88 ± 2.05 | 5.97 ± 2.71 | 0.883 |
| CK, U/L | 723.67 ± 1908.74 | 354.18 ± 463.93 | 0.319 |
| CK-MB, U/L | 19.74 ± 20.20 | 14.94 ± 7.00 | 0.235 |
| C-reactive protein, mg/L | 15.28 ± 38.12 | 8.67 ± 13.76 | 0.386 |
| IL-6, pg/ml | 50.70 ± 7.11 | 45.46 ± 6.58 | 0.005 |
| MoCA, | 0.770 | ||
| ≥26 | 22 (75.9%) | 7 (24.1%) | |
| <26 | 20 (69.05%) | 9 (31.0%) | |
BMI, body mass index; RBC, red-blood-cell; MCV, mean corpuscular volume; AST, aspartate aminotransferase; ALT, alanine transaminase; GGT, gamma-glutamyl transpeptidase; TBIL, total bilirubin; DBIL, direct bilirubin; IBIL, indirect bilirubin; HDL, high-density lipoprotein; LDL, low-density lipoprotein; UA, uric acid; BUN, blood urea nitrogen; CK, creatine kinase; CK-MB, creatine kinase MB; IL-6, interleukin-6; MoCA, Montreal cognitive assessment.
Binary logistic regression models for SERPINA3.
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| IL-6 | −0.105 | 0.043 | 0.015 | 0.900 | 0.827 | 0.980 |
| Neutrophil | −0.218 | 0.410 | 0.596 | 0.804 | 0.360 | 1.797 |
| WBC | 0.405 | 0.388 | 0.297 | 1.499 | 0.700 | 3.208 |
| Constant | 3.113 | 2.353 | 0.186 | 22.490 | ||
WBC, white blood cell; CI, confidence ration; OR, odds ratio; SE, standard error.
Linear regression models for SERPINA3.
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| IL-6 | 0.357 | 0.006 | 0.299 | 0.013 |
| WBCs | −0.442 | 0.001 | −0.225 | 0.605 |
| Neutrophils | −0.441 | 0.001 | −0.181 | 0.677 |
WBC, white blood cell.
Figure 6Kaplan-Meier curves based on SERPINA3 levels in patients with alcohol dependence during follow-up of up to 8 months (P = 0.489).
Figure 7Receiver operator characteristic (ROC) curve based on SERPINA3 levels in patients with alcohol dependence. The area under the curve (AUC) for SERPINA3 was 0.921 (P < 0.0001), sensitivity was 93.1%, and specificity was 80.0%.
Cox regression analyses for predictors of relapse.
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| AST | 1.004 | 0.017 | 1.003 | 0.030 |
| Lymphocyte | 1.594 | 0.042 | 1.485. | 0.070 |
AST, aspartate transaminase; CI, confidence interval; HR, hazard ratio.
Figure 8Gene expression patterns in the three gene expression datasets: GSE29555, GSE44456, and GSE62699. Upregulation of genes is marked in red; downregulation of genes is marked in blue.