| Literature DB >> 35095340 |
Asha B Chelani1,2, Sneha Gautam3,2.
Abstract
Coronavirus has been identified as one of the deadliest diseases and the WHO has declared it a pandemic and a global health crisis. It has become a massive challenge for humanity. India is also facing its fierceness as it is highly infectious and mutating at a rapid rate. To control its spread, many interventions have been applied in India since the first reported case on January 30, 2020. Several studies have been conducted to assess the impact of climatic and weather conditions on its spread in the last one and half years span. As it is a well-established fact that temperature and humidity could trigger the onset of diseases such as influenza and respiratory disorders, the relationship of meteorological variables with the number of COVID-19 confirmed cases has been anticipated. The association of several meteorological variables has therefore been studied in the past with the number of COVID-19 confirmed cases. The conclusions in those studies are based on the data obtained at an early stage, and the inferences drawn based on those short time series studies may not be valid over a longer period. This study attempted to assess the influence of temperature, humidity, wind speed, dew point, previous day's number of deaths, and government interventions on the number of COVID-19 confirmed cases in 18 districts of India. It is also attempted to identify the important predictors of the number of confirmed COVID-19 cases in those districts. The random forest model and the hybrid model obtained by modelling the random forest model's residuals are used to predict the response variable. It is observed that meteorological variables are useful only to some extent when used with the data on the number of the previous day's deaths and lockdown information in predicting the number of COVID-19 cases. Partial lockdown is more important than complete or no lockdown in predicting the number of confirmed COVID-19 cases. Since the time span of the data in the study is reasonably large, the information is useful to policymakers in balancing the restriction activities and economic losses to individuals and the government.Entities:
Keywords: COVID—19; Hybrid model; India; Lockdown; Meteorological parameters; Random forest model
Year: 2022 PMID: 35095340 PMCID: PMC8787448 DOI: 10.1007/s00477-021-02160-4
Source DB: PubMed Journal: Stoch Environ Res Risk Assess ISSN: 1436-3240 Impact factor: 3.821
Fig. 1Location of districts in map of India
Fig. 2Monthly variations in total number of confirmed COVID-19 cases (divided by population of the district) since April 26, 2020 to June 15, 2021 in various districts of India
Descriptive statistics of number of confirmed cases and meteorological variables
| S. no. | District | Temp | RH | WS | Dew | Death_1 | Cases* |
|---|---|---|---|---|---|---|---|
| Mean ± SD | Mean ± SD | Mean ± SD | Mean ± SD | Mean ± SD | Mean ± SD | Mean ± SD | |
| 1 | Chandrapur | 28.4 ± 2.2 | 49.1 ± 12.4 | 0.4 ± 0.2 | 18.24 ± 3.56 | 1.7 ± 4.5 | 95.8 ± 172.2 |
| 2 | Chennai | 32.0 ± 3.5 | 72.8 ± 8.3 | 2.1 ± 1.4 | 26.0 ± 3.31 | 2.7 ± 4.3 | 178.5 ± 211.7 |
| 3 | Delhi | 26.0 ± 5.9 | 56.4 ± 14.5 | 0.8 ± 0.3 | 17.3 ± 5.67 | 3.2 ± 4.7 | 181.5 ± 284.8 |
| 4 | Dewas | 29.3 ± 1.3 | 51.0 ± 23.1 | 3.1 ± 1.0 | 19.45 ± 4.9 | 0.1 ± 0.3 | 11.9 ± 19.2 |
| 5 | Faridabad | 26.6 ± 5.8 | 53.0 ± 18.7 | 0.7 ± 0.3 | 17.16 ± 5.95 | 0.9 ± 1.3 | 132.6 ± 202.4 |
| 6 | Jodhpur | 31.6 ± 5.3 | 44.7 ± 24.3 | 0.8 ± 0.4 | 20.57 ± 8.02 | 0.7 ± 1.5 | 73.2 ± 122.1 |
| 7 | Kanpur | 35.7 ± 2.5 | 60.4 ± 14.7 | 1.7 ± 0.8 | 27.8 ± 3.34 | 1.0 ± 1.5 | 43.5 ± 84.6 |
| 8 | Kolkata | 26.9 ± 4.4 | 71.1 ± 14.7 | 0.8 ± 0.7 | 21.14 ± 5.79 | 0.8 ± 0.7 | 49.3 ± 65.3 |
| 9 | Ludhiana | 24.6 ± 7.5 | 65.6 ± 20.5 | 0.5 ± 0.2 | 17.74 ± 6.43 | 1.4 ± 1.7 | 59.4 ± 88.6 |
| 10 | Mumbai | 25.9 ± 2.0 | 72.9 ± 13.5 | 0.5 ± 0.1 | 20.49 ± 3.47 | 3.0 ± 4.1 | 138.6 ± 161.7 |
| 11 | Nagpur | 24.2 ± 6.4 | 49.1 ± 11.9 | 0.5 ± 0.1 | 14.14 ± 7.11 | 4.1 ± 7.0 | 255.1 ± 388.6 |
| 12 | Patiala | 23.3 ± 6.7 | 69.7 ± 21.4 | 0.5 ± 0.2 | 17.29 ± 6.34 | 1.7 ± 2.3 | 60.9 ± 77.8 |
| 13 | Patna | 25.6 ± 5.8 | 70.7 ± 16.7 | 0.5 ± 0.2 | 19.7 ± 5.74 | 1.0 ± 9.0 | 60.1 ± 103.7 |
| 14 | Pune | 35.8 ± 12.5 | 48.6 ± 14.8 | 0.5 ± 0.2 | 21.52 ± 8.46 | 4.0 ± 6.3 | 264.9 ± 313.0 |
| 15 | Rohtak | 25.5 ± 7.9 | 51.7 ± 9.9 | 1.1 ± 0.6 | 16.37 ± 7.68 | 1.1 ± 2.9 | 58.5 ± 86.1 |
| 16 | Thane | 26.8 ± 4.2 | 71.8 ± 12.5 | 0.5 ± 0.7 | 7.08 ± 3.82 | 2.2 ± 3.9 | 123.8 ± 131.3 |
| 17 | Ujjain | 31.4 ± 1.4 | 51.6 ± 21.1 | 2.8 ± 1.3 | 21.69 ± 5.02 | 0.2 ± 0.6 | 22.8 ± 40.1 |
| 18 | Varanasi | 25.3 ± 6.7 | 57.1 ± 23.5 | 1.1 ± 0.9 | 18.16 ± 6.18 | 0.6 ± 0.9 | 55.7 ± 118.7 |
Cases* refers the number of confirmed cases per million
Death_1: number of deaths due to COVID-19 on previous day, WS wind speed, Temp temperature, RH relative humidity, Dew dew point temperature
Correlation between meteorological variables and number of confirmed cases
| S. no. | District | Death_1 | Temp | RH | WS | Dew |
|---|---|---|---|---|---|---|
| 1 | Chandrapur | 0.44* | −0.01 | − 0.18* | − 0.03 | − 0.13* |
| 2 | Chennai | 0.55* | 0.13* | − 0.22* | 0.05 | 0.11* |
| 3 | Delhi | 0.80* | 0.12* | − 0.34* | − 0.03 | − 0.05 |
| 4 | Dewas | 0.17* | 0.23* | − 0.3* | − 0.02 | − 0.22* |
| 5 | Faridabad | 0.72* | 0.14* | − 0.29* | 0 | − 0.04 |
| 6 | Jodhpur | 0.88* | 0.21* | − 0.23* | − 0.04 | 0 |
| 7 | Kanpur | 0.60* | 0.11* | − 0.47* | 0.15* | − 0.34* |
| 8 | Kolkata | 0.69* | 0.27* | − 0.06 | − 0.03 | 0.17* |
| 9 | Ludhiana | 0.77* | 0.25* | − 0.4* | 0.02 | 0.04 |
| 10 | Mumbai | 0.08 | 0.42* | 0.23* | 0.23* | 0.42* |
| 11 | Nagpur | 0.31* | 0.24* | 0.05 | 0.02 | 0.22* |
| 12 | Patiala | 0.79* | 0.26* | − 0.41* | 0.06 | 0 |
| 13 | Patna | 0.06 | 0.29* | − 0.48* | 0.21* | 0.01 |
| 14 | Pune | 0.16* | 0.15* | − 0.43* | 0.09 | 0.13* |
| 15 | Rohtak | 0.71* | 0.12* | − 0.24* | 0.13* | 0.03 |
| 16 | Thane | 0.11* | 0.10 | 0.13* | − 0.13* | 0.05 |
| 17 | Ujjain | 0.29* | − 0.06 | − 0.44* | 0.00 | − 0.39* |
| 18 | Varanasi | 0.67* | 0.40* | − 0.17 | 0.16* | 0.26* |
Death_1: number of deaths due to COVID-19 on previous day, WS wind speed, Temp temperature, RH relative humidity, Dew dew point temperature, *: significant at p = 0.05
Variable importance matrix
| Variable | Description | %IncMSE |
|---|---|---|
| Death_1 | Number of deaths due to COVID-19 on previous day | 39.6 |
| Temp | Temperature | 22.7 |
| WS | Wind speed | 20.3 |
| Dew | Dew point temperature | 16.8 |
| RH | Relative humidity | 14.8 |
| Lk3 | Partial lockdown | 11.3 |
| Lk2 | Unlock | 9.3 |
| Lk1 | No lock down | 6.9 |
| Lk4 | Complete lockdown | 0 |
Fig. 3a Observed and predicted number of cases using hybrid model in 18 districts for training set b Observed and predicted number of cases using hybrid model in 18 districts for testing set
Model evaluation for training and testing set
| Statistics | RF model | Hybrid model | ||
|---|---|---|---|---|
| Training | Testing | Training | Testing | |
| R2 | 0.96 | 0.76 | 0.96 | 0.79 |
| RMSE | 0.000037 | 0.000286 | 0.000033 | 0.000205 |
| NRMSE | 0.36 | 0.55 | 0.29 | 0.38 |